RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 CRYGAP11844 174 aa6.51□□□□□ -1.37
LMO3-227ENST00000541764 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
LMO3-227ENST00000541764 LAMTOR3Q9UHA4 124 aa6.51□□□□□ -1.37
LMO3-227ENST00000541764 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
LMO3-227ENST00000541764 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
LMO3-227ENST00000541764 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
LMO3-227ENST00000541764 IGKV2D-24A0A075B6R9 120 aa6.49□□□□□ -1.37
LMO3-227ENST00000541764 Q6ZRP5 223 aa6.49□□□□□ -1.37
LMO3-227ENST00000541764 TM2D3Q9BRN9 247 aa6.49□□□□□ -1.37
LMO3-227ENST00000541764 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
LMO3-227ENST00000541764 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
LMO3-227ENST00000541764 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
LMO3-227ENST00000541764 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
LMO3-227ENST00000541764 SERP2Q8N6R1 65 aa6.48□□□□□ -1.37
LMO3-227ENST00000541764 RMI2Q96E14 147 aa6.47□□□□□ -1.37
LMO3-227ENST00000541764 UPK3BQ9BT76 320 aa6.47□□□□□ -1.37
LMO3-227ENST00000541764 CXCL6P80162 114 aa6.47□□□□□ -1.37
LMO3-227ENST00000541764 MRAPQ8TCY5 172 aa6.47□□□□□ -1.37
LMO3-227ENST00000541764 DNAH1Q9P2D7 4330 aa6.46□□□□□ -1.38
LMO3-227ENST00000541764 LINC00588Q9Y4M8 146 aa6.46□□□□□ -1.38
LMO3-227ENST00000541764 A0A087WVE0 104 aa6.45□□□□□ -1.38
LMO3-227ENST00000541764 Q6ZVQ6 151 aa6.45□□□□□ -1.38
LMO3-227ENST00000541764 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
LMO3-227ENST00000541764 F8P00451 2351 aa6.44□□□□□ -1.38
LMO3-227ENST00000541764 PRYO14603 147 aa6.44□□□□□ -1.38
LMO3-227ENST00000541764 SPRR1AP35321 89 aa6.44□□□□□ -1.38
LMO3-227ENST00000541764 NKAPP1Q8N9T2 125 aa6.44□□□□□ -1.38
LMO3-227ENST00000541764 ANK2Q01484 3957 aa6.44□□□□□ -1.38
LMO3-227ENST00000541764 A0A1B0GW54 56 aa6.43□□□□□ -1.38
LMO3-227ENST00000541764 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
LMO3-227ENST00000541764 M0R2N4 97 aa6.43□□□□□ -1.38
LMO3-227ENST00000541764 LINC01547P58512 204 aaPredicted RBP6.43□□□□□ -1.38
LMO3-227ENST00000541764 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
LMO3-227ENST00000541764 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
LMO3-227ENST00000541764 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
LMO3-227ENST00000541764 FAM19A1Q7Z5A9 133 aa6.42□□□□□ -1.38
LMO3-227ENST00000541764 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
LMO3-227ENST00000541764 SMIM20Q8N5G0 67 aa6.41□□□□□ -1.38
LMO3-227ENST00000541764 HUWE1Q7Z6Z7 4374 aaKnown RBP6.41□□□□□ -1.38
LMO3-227ENST00000541764 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
LMO3-227ENST00000541764 K7EIL1 84 aa6.41□□□□□ -1.38
LMO3-227ENST00000541764 Q6ZRX8 168 aa6.4□□□□□ -1.39
LMO3-227ENST00000541764 LOC107984640A0A0U1RRK4 108 aa6.39□□□□□ -1.39
LMO3-227ENST00000541764 Q8N377 158 aa6.39□□□□□ -1.39
LMO3-227ENST00000541764 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
LMO3-227ENST00000541764 TENM3Q9P273 2699 aa6.38□□□□□ -1.39
LMO3-227ENST00000541764 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
LMO3-227ENST00000541764 TMEM258P61165 79 aa6.38□□□□□ -1.39
LMO3-227ENST00000541764 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
LMO3-227ENST00000541764 HAMPP81172 84 aa6.38□□□□□ -1.39
LMO3-227ENST00000541764 CASC10Q5T4H9 136 aa6.37□□□□□ -1.39
LMO3-227ENST00000541764 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
LMO3-227ENST00000541764 MAST4O15021 2626 aa6.36□□□□□ -1.39
LMO3-227ENST00000541764 ETDCA0A1B0GVM5 59 aa6.35□□□□□ -1.39
LMO3-227ENST00000541764 CNBPP62633 177 aaKnown RBP6.35□□□□□ -1.39
LMO3-227ENST00000541764 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
LMO3-227ENST00000541764 Q9BRP9 147 aa6.35□□□□□ -1.39
LMO3-227ENST00000541764 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.4
LMO3-227ENST00000541764 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.4
LMO3-227ENST00000541764 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
LMO3-227ENST00000541764 STAB1Q9NY15 2570 aa6.33□□□□□ -1.4
LMO3-227ENST00000541764 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
LMO3-227ENST00000541764 C16orf90A8MZG2 172 aa6.32□□□□□ -1.4
LMO3-227ENST00000541764 NREPQ16612 68 aa6.32□□□□□ -1.4
LMO3-227ENST00000541764 SPRR4Q96PI1 79 aa6.32□□□□□ -1.4
LMO3-227ENST00000541764 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
LMO3-227ENST00000541764 J3KT08 172 aa6.31□□□□□ -1.4
LMO3-227ENST00000541764 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
LMO3-227ENST00000541764 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
LMO3-227ENST00000541764 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
LMO3-227ENST00000541764 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
LMO3-227ENST00000541764 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
LMO3-227ENST00000541764 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
LMO3-227ENST00000541764 BAHCC1Q9P281 2608 aa6.3□□□□□ -1.4
LMO3-227ENST00000541764 APLNQ9ULZ1 77 aa6.3□□□□□ -1.4
LMO3-227ENST00000541764 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
LMO3-227ENST00000541764 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
LMO3-227ENST00000541764 Q8NBF4 154 aa6.29□□□□□ -1.4
LMO3-227ENST00000541764 DEFB105AQ8NG35 78 aa6.29□□□□□ -1.4
LMO3-227ENST00000541764 DNAH9Q9NYC9 4486 aa6.29□□□□□ -1.4
LMO3-227ENST00000541764 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
LMO3-227ENST00000541764 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 IGLV8-61A0A075B6I0 122 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 BPY2O14599 106 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 C20orf197Q8N268 126 aa6.28□□□□□ -1.4
LMO3-227ENST00000541764 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
LMO3-227ENST00000541764 NDUFC1O43677 76 aa6.27□□□□□ -1.41
LMO3-227ENST00000541764 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
LMO3-227ENST00000541764 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
LMO3-227ENST00000541764 A0A096LNI7 61 aa6.26□□□□□ -1.41
LMO3-227ENST00000541764 H0Y9J4 135 aa6.26□□□□□ -1.41
LMO3-227ENST00000541764 H7BZZ5 65 aa6.26□□□□□ -1.41
LMO3-227ENST00000541764 UBE2BP63146 152 aa6.26□□□□□ -1.41
LMO3-227ENST00000541764 SCXQ7RTU7 201 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms