RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
SNHG1-216ENST00000541416 ZNF73O43830 326 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-216ENST00000541416 IGLV6-57P01721 117 aa6.65□□□□□ -1.34
SNHG1-216ENST00000541416 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
SNHG1-216ENST00000541416 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
SNHG1-216ENST00000541416 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
SNHG1-216ENST00000541416 LAMTOR3Q9UHA4 124 aa6.63□□□□□ -1.35
SNHG1-216ENST00000541416 LEPROTO15243 131 aa6.62□□□□□ -1.35
SNHG1-216ENST00000541416 NMUP48645 174 aa6.62□□□□□ -1.35
SNHG1-216ENST00000541416 HERVK_113P61574 105 aa6.62□□□□□ -1.35
SNHG1-216ENST00000541416 CD164Q04900 197 aa6.61□□□□□ -1.35
SNHG1-216ENST00000541416 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
SNHG1-216ENST00000541416 H0Y8G0 127 aa6.6□□□□□ -1.35
SNHG1-216ENST00000541416 J3QQQ9 107 aa6.6□□□□□ -1.35
SNHG1-216ENST00000541416 HSBP1O75506 76 aa6.6□□□□□ -1.35
SNHG1-216ENST00000541416 LGALS3P17931 250 aaKnown RBP6.6□□□□□ -1.35
SNHG1-216ENST00000541416 SPRR1BP22528 89 aa6.6□□□□□ -1.35
SNHG1-216ENST00000541416 PLNP26678 52 aa6.6□□□□□ -1.35
SNHG1-216ENST00000541416 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.35
SNHG1-216ENST00000541416 C10orf91Q5T1B1 145 aa6.58□□□□□ -1.36
SNHG1-216ENST00000541416 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
SNHG1-216ENST00000541416 H7C2G1 150 aa6.57□□□□□ -1.36
SNHG1-216ENST00000541416 TAL2Q16559 108 aa6.56□□□□□ -1.36
SNHG1-216ENST00000541416 OR13C6PQ8NH95 151 aa6.56□□□□□ -1.36
SNHG1-216ENST00000541416 DPM2O94777 84 aa6.55□□□□□ -1.36
SNHG1-216ENST00000541416 LEPROTL1O95214 131 aa6.55□□□□□ -1.36
SNHG1-216ENST00000541416 NPC2P61916 151 aa6.55□□□□□ -1.36
SNHG1-216ENST00000541416 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
SNHG1-216ENST00000541416 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-216ENST00000541416 AKR1D1P51857 326 aa6.54□□□□□ -1.36
SNHG1-216ENST00000541416 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SNHG1-216ENST00000541416 Q5XG85 94 aa6.54□□□□□ -1.36
SNHG1-216ENST00000541416 SNAPINO95295 136 aa6.53□□□□□ -1.36
SNHG1-216ENST00000541416 Q1RN00 199 aa6.53□□□□□ -1.36
SNHG1-216ENST00000541416 SPANXCQ9NY87 97 aa6.53□□□□□ -1.36
SNHG1-216ENST00000541416 HSPB8Q9UJY1 196 aa6.53□□□□□ -1.36
SNHG1-216ENST00000541416 A0A0J9YXY3 114 aa6.52□□□□□ -1.37
SNHG1-216ENST00000541416 TEX49A0A1B0GTD5 131 aa6.52□□□□□ -1.37
SNHG1-216ENST00000541416 IGKCP01834 107 aa6.52□□□□□ -1.37
SNHG1-216ENST00000541416 SOSTDC1Q6X4U4 206 aa6.52□□□□□ -1.37
SNHG1-216ENST00000541416 DEFB105AQ8NG35 78 aa6.52□□□□□ -1.37
SNHG1-216ENST00000541416 APOC3P02656 99 aa6.51□□□□□ -1.37
SNHG1-216ENST00000541416 COX7BP24311 80 aa6.51□□□□□ -1.37
SNHG1-216ENST00000541416 C1orf195Q5TG92 126 aa6.51□□□□□ -1.37
SNHG1-216ENST00000541416 SVBPQ8N300 66 aa6.51□□□□□ -1.37
SNHG1-216ENST00000541416 SPANXDQ9BXN6 97 aa6.51□□□□□ -1.37
SNHG1-216ENST00000541416 ELOF1P60002 83 aaKnown RBP6.5□□□□□ -1.37
SNHG1-216ENST00000541416 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
SNHG1-216ENST00000541416 KRTAP9-7A8MTY7 169 aa6.49□□□□□ -1.37
SNHG1-216ENST00000541416 TCL1BO95988 128 aa6.49□□□□□ -1.37
SNHG1-216ENST00000541416 LINC00518Q8N0U6 118 aa6.49□□□□□ -1.37
SNHG1-216ENST00000541416 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-216ENST00000541416 C6orf99Q4VX62 202 aa6.48□□□□□ -1.37
SNHG1-216ENST00000541416 SMIM29Q86T20 159 aa6.48□□□□□ -1.37
SNHG1-216ENST00000541416 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
SNHG1-216ENST00000541416 E9PLD3 99 aa6.47□□□□□ -1.37
SNHG1-216ENST00000541416 Q6Q795 121 aa6.47□□□□□ -1.37
SNHG1-216ENST00000541416 PMCHL2Q9BQD1 86 aa6.47□□□□□ -1.37
SNHG1-216ENST00000541416 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
SNHG1-216ENST00000541416 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-216ENST00000541416 TIMM17BO60830 172 aa6.46□□□□□ -1.38
SNHG1-216ENST00000541416 CFC1P0CG37 223 aa6.46□□□□□ -1.38
SNHG1-216ENST00000541416 FABP4P15090 132 aa6.46□□□□□ -1.38
SNHG1-216ENST00000541416 SERF1AO75920 110 aa6.45□□□□□ -1.38
SNHG1-216ENST00000541416 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
SNHG1-216ENST00000541416 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
SNHG1-216ENST00000541416 YPEL4Q96NS1 127 aa6.43□□□□□ -1.38
SNHG1-216ENST00000541416 USH2AO75445 5202 aa6.42□□□□□ -1.38
SNHG1-216ENST00000541416 IGLV5-48A0A075B6I7 105 aa6.42□□□□□ -1.38
SNHG1-216ENST00000541416 A4D1N5 150 aa6.42□□□□□ -1.38
SNHG1-216ENST00000541416 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
SNHG1-216ENST00000541416 LITAFQ99732 161 aa6.42□□□□□ -1.38
SNHG1-216ENST00000541416 NHP2Q9NX24 153 aaKnown RBP6.42□□□□□ -1.38
SNHG1-216ENST00000541416 F8WEM9 126 aa6.41□□□□□ -1.38
SNHG1-216ENST00000541416 TRGC2P03986 189 aa6.41□□□□□ -1.38
SNHG1-216ENST00000541416 PCP2Q8IVA1 136 aa6.4□□□□□ -1.38
SNHG1-216ENST00000541416 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
SNHG1-216ENST00000541416 A0A0G2JQZ4 141 aa6.38□□□□□ -1.39
SNHG1-216ENST00000541416 LINC00310P59036 64 aa6.38□□□□□ -1.39
SNHG1-216ENST00000541416 Q75L30 129 aa6.38□□□□□ -1.39
SNHG1-216ENST00000541416 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
SNHG1-216ENST00000541416 C20orf202A1L168 122 aa6.37□□□□□ -1.39
SNHG1-216ENST00000541416 A6NDN8 102 aa6.37□□□□□ -1.39
SNHG1-216ENST00000541416 TRBV20-1A0A075B6N2 111 aa6.35□□□□□ -1.39
SNHG1-216ENST00000541416 SCGB1D4Q6XE38 83 aa6.35□□□□□ -1.39
SNHG1-216ENST00000541416 OBSCN-AS1Q96MR7 158 aa6.35□□□□□ -1.39
SNHG1-216ENST00000541416 SYS1-DBNDD2H3BUS1 97 aa6.34□□□□□ -1.39
SNHG1-216ENST00000541416 IFITM1P13164 125 aa6.34□□□□□ -1.39
SNHG1-216ENST00000541416 Q6JHZ5 121 aa6.34□□□□□ -1.39
SNHG1-216ENST00000541416 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
SNHG1-216ENST00000541416 VAMP3Q15836 100 aa6.32□□□□□ -1.4
SNHG1-216ENST00000541416 Q6ZVH6 145 aa6.32□□□□□ -1.4
SNHG1-216ENST00000541416 CLEC2BQ92478 149 aa6.32□□□□□ -1.4
SNHG1-216ENST00000541416 TRBV7-7A0A0K0K1E9 115 aa6.31□□□□□ -1.4
SNHG1-216ENST00000541416 PET117Q6UWS5 81 aa6.31□□□□□ -1.4
SNHG1-216ENST00000541416 SLC7A5P1Q8MH63 180 aa6.31□□□□□ -1.4
SNHG1-216ENST00000541416 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
SNHG1-216ENST00000541416 LINC01545Q5VT33 79 aa6.3□□□□□ -1.4
SNHG1-216ENST00000541416 FCGBPQ9Y6R7 5405 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-216ENST00000541416 Q96NJ1 140 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms