RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 Q8N9L7 120 aa6.38□□□□□ -1.39
TTC39C-203ENST00000540918 LINC00575Q6W349 94 aa6.37□□□□□ -1.39
TTC39C-203ENST00000540918 PDZD2O15018 2839 aa6.37□□□□□ -1.39
TTC39C-203ENST00000540918 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.36□□□□□ -1.39
TTC39C-203ENST00000540918 NDUFC2O95298 119 aa6.36□□□□□ -1.39
TTC39C-203ENST00000540918 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
TTC39C-203ENST00000540918 H3BNG1 76 aa6.36□□□□□ -1.39
TTC39C-203ENST00000540918 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
TTC39C-203ENST00000540918 PRR4Q16378 134 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 LINC00612Q8N6U2 182 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 LINC00846Q9NV44 126 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 A0A087WSZ3 146 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 PDE6GP18545 87 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 SMCR5Q8TEV8 140 aa6.35□□□□□ -1.39
TTC39C-203ENST00000540918 TM2D3Q9BRN9 247 aa6.34□□□□□ -1.39
TTC39C-203ENST00000540918 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
TTC39C-203ENST00000540918 A0A1W2PNN7 141 aa6.34□□□□□ -1.39
TTC39C-203ENST00000540918 FAM104AQ969W3 186 aa6.34□□□□□ -1.4
TTC39C-203ENST00000540918 Q9BRP9 147 aa6.34□□□□□ -1.4
TTC39C-203ENST00000540918 LINC00474Q9P2X8 69 aa6.33□□□□□ -1.4
TTC39C-203ENST00000540918 C15orf56Q8N910 161 aa6.33□□□□□ -1.4
TTC39C-203ENST00000540918 SNURFQ9Y675 71 aa6.33□□□□□ -1.4
TTC39C-203ENST00000540918 ATOX1O00244 68 aa6.33□□□□□ -1.4
TTC39C-203ENST00000540918 TENM3Q9P273 2699 aa6.32□□□□□ -1.4
TTC39C-203ENST00000540918 PRR34Q9NV39 138 aa6.32□□□□□ -1.4
TTC39C-203ENST00000540918 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
TTC39C-203ENST00000540918 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
TTC39C-203ENST00000540918 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
TTC39C-203ENST00000540918 H3BQ85 93 aa6.31□□□□□ -1.4
TTC39C-203ENST00000540918 RTL8CO15255 209 aa6.31□□□□□ -1.4
TTC39C-203ENST00000540918 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
TTC39C-203ENST00000540918 FAM19A3Q7Z5A8 133 aa6.3□□□□□ -1.4
TTC39C-203ENST00000540918 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
TTC39C-203ENST00000540918 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
TTC39C-203ENST00000540918 DMBT1Q9UGM3 2413 aaPredicted RBP6.3□□□□□ -1.4
TTC39C-203ENST00000540918 VPREB1P12018 145 aa6.29□□□□□ -1.4
TTC39C-203ENST00000540918 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
TTC39C-203ENST00000540918 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
TTC39C-203ENST00000540918 GVQW2A0A096LPI5 108 aaPredicted RBP6.28□□□□□ -1.4
TTC39C-203ENST00000540918 MP68P56378 58 aa6.28□□□□□ -1.4
TTC39C-203ENST00000540918 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
TTC39C-203ENST00000540918 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.4
TTC39C-203ENST00000540918 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
TTC39C-203ENST00000540918 PRYO14603 147 aa6.26□□□□□ -1.41
TTC39C-203ENST00000540918 SMR3BP02814 79 aaPredicted RBP6.26□□□□□ -1.41
TTC39C-203ENST00000540918 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
TTC39C-203ENST00000540918 Q6ZVQ6 151 aa6.26□□□□□ -1.41
TTC39C-203ENST00000540918 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
TTC39C-203ENST00000540918 MOBPQ13875 183 aa6.25□□□□□ -1.41
TTC39C-203ENST00000540918 C16orf90A8MZG2 172 aa6.24□□□□□ -1.41
TTC39C-203ENST00000540918 LINC01547P58512 204 aaPredicted RBP6.24□□□□□ -1.41
TTC39C-203ENST00000540918 Q6JHZ5 121 aa6.24□□□□□ -1.41
TTC39C-203ENST00000540918 APLNQ9ULZ1 77 aa6.24□□□□□ -1.41
TTC39C-203ENST00000540918 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
TTC39C-203ENST00000540918 Q6ZRX8 168 aa6.23□□□□□ -1.41
TTC39C-203ENST00000540918 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
TTC39C-203ENST00000540918 IGLV6-57P01721 117 aa6.22□□□□□ -1.41
TTC39C-203ENST00000540918 TGP01266 2768 aa6.22□□□□□ -1.41
TTC39C-203ENST00000540918 A0A087WTM6 91 aa6.2□□□□□ -1.42
TTC39C-203ENST00000540918 C5orf47Q569G3 176 aa6.2□□□□□ -1.42
TTC39C-203ENST00000540918 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
TTC39C-203ENST00000540918 RPL37AP61513 92 aaKnown RBP6.2□□□□□ -1.42
TTC39C-203ENST00000540918 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
TTC39C-203ENST00000540918 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 ERC2-IT1O76042 136 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 Q8NDZ9 215 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 LINC00476Q8WZB0 136 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 F8WDY8 70 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 UQCRQO14949 82 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 WIPF1O43516 503 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
TTC39C-203ENST00000540918 ATP5EP2Q5VTU8 51 aa6.18□□□□□ -1.42
TTC39C-203ENST00000540918 IGLV1-50A0A075B6I6 118 aa6.18□□□□□ -1.42
TTC39C-203ENST00000540918 TNP2Q05952 138 aa6.18□□□□□ -1.42
TTC39C-203ENST00000540918 SERP2Q8N6R1 65 aa6.18□□□□□ -1.42
TTC39C-203ENST00000540918 MPLKIPQ8TAP9 179 aa6.17□□□□□ -1.42
TTC39C-203ENST00000540918 LINC00208Q96KT6 92 aa6.17□□□□□ -1.42
TTC39C-203ENST00000540918 Q6Q795 121 aa6.16□□□□□ -1.42
TTC39C-203ENST00000540918 C9orf163Q8N9P6 203 aa6.16□□□□□ -1.42
TTC39C-203ENST00000540918 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
TTC39C-203ENST00000540918 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
TTC39C-203ENST00000540918 PCOTHQ58A44 107 aa6.15□□□□□ -1.42
TTC39C-203ENST00000540918 Q6ZQT0 140 aa6.15□□□□□ -1.42
TTC39C-203ENST00000540918 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
TTC39C-203ENST00000540918 COX7CP15954 63 aa6.14□□□□□ -1.43
TTC39C-203ENST00000540918 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
TTC39C-203ENST00000540918 KCNQ1DNQ9H478 68 aa6.14□□□□□ -1.43
TTC39C-203ENST00000540918 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
TTC39C-203ENST00000540918 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
TTC39C-203ENST00000540918 Q8N377 158 aa6.13□□□□□ -1.43
TTC39C-203ENST00000540918 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
TTC39C-203ENST00000540918 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
TTC39C-203ENST00000540918 BCE1O60756 84 aa6.12□□□□□ -1.43
TTC39C-203ENST00000540918 SMIM29Q86T20 159 aa6.12□□□□□ -1.43
TTC39C-203ENST00000540918 Q8NBF4 154 aa6.11□□□□□ -1.43
TTC39C-203ENST00000540918 PSORS1C2Q9UIG4 136 aa6.11□□□□□ -1.43
TTC39C-203ENST00000540918 PLA2G1BP04054 148 aaKnown RBP6.1□□□□□ -1.43
TTC39C-203ENST00000540918 FAM236DA0A1B0GTK5 79 aa6.1□□□□□ -1.43
TTC39C-203ENST00000540918 FAM236CP0DP71 79 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms