RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SCGB3A1Q96QR1 104 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 C22orf24Q9Y442 160 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 TRBV27A0A0K0K1C4 114 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 TRBV6-8A0A0A6YYG3 113 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 DNAL4O96015 105 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 AMELXQ99217 191 aa5.01□□□□□ -1.61
GNE-205ENST00000539815 COX6A2Q02221 97 aa5□□□□□ -1.61
GNE-205ENST00000539815 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
GNE-205ENST00000539815 EPPK1P58107 5090 aaKnown RBP5□□□□□ -1.61
GNE-205ENST00000539815 C9orf129Q5T035 196 aaKnown RBP5□□□□□ -1.61
GNE-205ENST00000539815 PRR9Q5T870 116 aa4.99□□□□□ -1.61
GNE-205ENST00000539815 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
GNE-205ENST00000539815 CAMK2N2Q96S95 79 aa4.99□□□□□ -1.61
GNE-205ENST00000539815 C14orf132Q9NPU4 83 aa4.99□□□□□ -1.61
GNE-205ENST00000539815 A0A087WYN8 130 aa4.99□□□□□ -1.61
GNE-205ENST00000539815 ENHOQ6UWT2 76 aa4.99□□□□□ -1.61
GNE-205ENST00000539815 Q6ZRP5 223 aa4.98□□□□□ -1.61
GNE-205ENST00000539815 Q6ZVQ6 151 aa4.98□□□□□ -1.61
GNE-205ENST00000539815 C9orf163Q8N9P6 203 aa4.97□□□□□ -1.61
GNE-205ENST00000539815 IGLV4-69A0A075B6H9 119 aa4.96□□□□□ -1.61
GNE-205ENST00000539815 TRAV7A0A075B6U4 112 aa4.96□□□□□ -1.62
GNE-205ENST00000539815 DIRC1Q969H9 104 aa4.96□□□□□ -1.62
GNE-205ENST00000539815 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
GNE-205ENST00000539815 SYCNQ0VAF6 134 aa4.95□□□□□ -1.62
GNE-205ENST00000539815 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
GNE-205ENST00000539815 TRBV6-1A0A0K0K1D8 114 aa4.94□□□□□ -1.62
GNE-205ENST00000539815 PIK3CD-AS1Q5SR53 167 aa4.94□□□□□ -1.62
GNE-205ENST00000539815 KIF25-AS1Q9Y6Z4 181 aa4.94□□□□□ -1.62
GNE-205ENST00000539815 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
GNE-205ENST00000539815 CHTF8P0CG12 524 aa4.94□□□□□ -1.62
GNE-205ENST00000539815 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
GNE-205ENST00000539815 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 NDUFS5O43920 106 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 Q8N3U1 123 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 TOMM6Q96B49 74 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 ZNF625Q96I27 306 aaPredicted RBP4.93□□□□□ -1.62
GNE-205ENST00000539815 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 TRAV22A0A0B4J277 110 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 IGIPA6NJ69 53 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 CHCHD10Q8WYQ3 142 aaPredicted RBP4.93□□□□□ -1.62
GNE-205ENST00000539815 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
GNE-205ENST00000539815 A0A0J9YXY3 114 aa4.92□□□□□ -1.62
GNE-205ENST00000539815 RNASE13Q5GAN3 156 aaKnown RBP4.92□□□□□ -1.62
GNE-205ENST00000539815 LCA10Q71F78 164 aa4.92□□□□□ -1.62
GNE-205ENST00000539815 HERC2O95714 4834 aa4.92□□□□□ -1.62
GNE-205ENST00000539815 COX7A2LO14548 114 aa4.92□□□□□ -1.62
GNE-205ENST00000539815 OPRPNQ99935 248 aaPredicted RBP4.92□□□□□ -1.62
GNE-205ENST00000539815 PRYO14603 147 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 TSHBP01222 138 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 LINC00313P59037 77 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 DYNC2H1Q8NCM8 4307 aaKnown RBP4.91□□□□□ -1.62
GNE-205ENST00000539815 A6NN06 94 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 Q1T7F1 81 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 PHF5AQ7RTV0 110 aaKnown RBP4.91□□□□□ -1.62
GNE-205ENST00000539815 SMIM2Q9BVW6 85 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 PLECQ15149 4684 aaKnown RBP4.91□□□□□ -1.62
GNE-205ENST00000539815 NDUFC1O43677 76 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 LITAFQ99732 161 aa4.91□□□□□ -1.62
GNE-205ENST00000539815 SPINK6Q6UWN8 80 aa4.9□□□□□ -1.62
GNE-205ENST00000539815 LINC00337Q8N6G1 96 aa4.9□□□□□ -1.62
GNE-205ENST00000539815 PSORS1C2Q9UIG4 136 aa4.9□□□□□ -1.62
GNE-205ENST00000539815 SDHAF1A6NFY7 115 aa4.9□□□□□ -1.63
GNE-205ENST00000539815 NCR3O14931 201 aa4.9□□□□□ -1.63
GNE-205ENST00000539815 PPP1R17O96001 155 aa4.9□□□□□ -1.63
GNE-205ENST00000539815 RNASE3P12724 160 aaKnown RBP4.9□□□□□ -1.63
GNE-205ENST00000539815 C7orf65Q6ZTY9 151 aa4.9□□□□□ -1.63
GNE-205ENST00000539815 RYR1P21817 5038 aa4.9□□□□□ -1.63
GNE-205ENST00000539815 NDUFA1O15239 70 aa4.89□□□□□ -1.63
GNE-205ENST00000539815 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
GNE-205ENST00000539815 NKAPP1Q8N9T2 125 aa4.89□□□□□ -1.63
GNE-205ENST00000539815 ALMS1Q8TCU4 4167 aa4.88□□□□□ -1.63
GNE-205ENST00000539815 IGKV3D-20A0A0C4DH25 116 aa4.88□□□□□ -1.63
GNE-205ENST00000539815 LEPROTO15243 131 aa4.88□□□□□ -1.63
GNE-205ENST00000539815 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
GNE-205ENST00000539815 RPL39P62891 51 aaKnown RBP4.88□□□□□ -1.63
GNE-205ENST00000539815 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
GNE-205ENST00000539815 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
GNE-205ENST00000539815 TRBV7-4A0A0J9YYF1 115 aa4.88□□□□□ -1.63
GNE-205ENST00000539815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.87□□□□□ -1.63
GNE-205ENST00000539815 IGKV2-29A2NJV5 120 aaPredicted RBP4.87□□□□□ -1.63
GNE-205ENST00000539815 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
GNE-205ENST00000539815 UBE2AP49459 152 aa4.87□□□□□ -1.63
GNE-205ENST00000539815 TMEM141Q96I45 108 aa4.87□□□□□ -1.63
GNE-205ENST00000539815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.87□□□□□ -1.63
GNE-205ENST00000539815 TMEM254Q8TBM7 123 aa4.87□□□□□ -1.63
GNE-205ENST00000539815 NDUFA12Q9UI09 145 aa4.87□□□□□ -1.63
GNE-205ENST00000539815 hDV103S1A0JD37 113 aa4.87□□□□□ -1.63
GNE-205ENST00000539815 ZNF706Q9Y5V0 76 aaPredicted RBP4.87□□□□□ -1.63
GNE-205ENST00000539815 C9orf116Q5BN46 136 aaPredicted RBP4.86□□□□□ -1.63
GNE-205ENST00000539815 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
GNE-205ENST00000539815 Q5VV11 94 aa4.86□□□□□ -1.63
GNE-205ENST00000539815 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
GNE-205ENST00000539815 C11orf21Q9P2W6 132 aa4.85□□□□□ -1.63
GNE-205ENST00000539815 SUMO4Q6EEV6 95 aa4.85□□□□□ -1.63
GNE-205ENST00000539815 CNFNQ9BYD5 112 aa4.85□□□□□ -1.63
GNE-205ENST00000539815 Q6ZSA8 131 aa4.84□□□□□ -1.63
GNE-205ENST00000539815 C1orf64Q8NEQ6 169 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms