RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 CHTF8P0CG12 524 aa3.41□□□□□ -1.86
CELF1-220ENST00000539455 IFITM1P13164 125 aa3.41□□□□□ -1.86
CELF1-220ENST00000539455 GAGE2BQ13066 116 aa3.41□□□□□ -1.86
CELF1-220ENST00000539455 C9orf129Q5T035 196 aaKnown RBP3.41□□□□□ -1.86
CELF1-220ENST00000539455 SNHG12Q9BXW3 62 aa3.41□□□□□ -1.86
CELF1-220ENST00000539455 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 FAM168BA1KXE4 195 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 PANO1I0J062 215 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 K7ERJ3 54 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 M0R143 59 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
CELF1-220ENST00000539455 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.87
CELF1-220ENST00000539455 SDIM1Q6ZPB5 146 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
CELF1-220ENST00000539455 IGKV2-28A0A075B6P5 120 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 NCR3O14931 201 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 TRIAP1O43715 76 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 IGKV2D-28P01615 120 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 CFC1BP0CG36 223 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 CFC1P0CG37 223 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 VPREB1P12018 145 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 Q6ZSA8 131 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 COPS9Q8WXC6 57 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 PPDPFQ9H3Y8 114 aa3.39□□□□□ -1.87
CELF1-220ENST00000539455 NHP2Q9NX24 153 aaKnown RBP3.39□□□□□ -1.87
CELF1-220ENST00000539455 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 A0A1B0GWB2 263 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 NDUFC2O95298 119 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 FAM19A5Q7Z5A7 132 aaPredicted RBP3.38□□□□□ -1.87
CELF1-220ENST00000539455 LINC00337Q8N6G1 96 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 SVIPQ8NHG7 77 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
CELF1-220ENST00000539455 A0A0B4J2C4 111 aa3.37□□□□□ -1.87
CELF1-220ENST00000539455 A6NDN8 102 aa3.37□□□□□ -1.87
CELF1-220ENST00000539455 RPL13AP40429 203 aaKnown RBP3.37□□□□□ -1.87
CELF1-220ENST00000539455 SCXQ7RTU7 201 aa3.37□□□□□ -1.87
CELF1-220ENST00000539455 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
CELF1-220ENST00000539455 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
CELF1-220ENST00000539455 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
CELF1-220ENST00000539455 IGLV5-37A0A075B6J1 123 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 GAGE10A6NGK3 116 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 H7C2G1 150 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 M0QXV9 152 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 TAX1BP3O14907 124 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 COL5A1-AS1Q5SY13 56 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 NKAPP1Q8N9T2 125 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 OR13C6PQ8NH95 151 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 C7orf33Q8WU49 177 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
CELF1-220ENST00000539455 LINC00474Q9P2X8 69 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 PRO1854Q9UHT4 67 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 C22orf24Q9Y442 160 aa3.36□□□□□ -1.87
CELF1-220ENST00000539455 A0A087WYN8 130 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 TRBV10-3A0A0K0K1G6 114 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 TRBV10-2A0A0K0K1G8 114 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 M0R378 163 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 TSPAN13O95857 204 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 IGLV6-57P01721 117 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 RPL37AP61513 92 aaKnown RBP3.35□□□□□ -1.87
CELF1-220ENST00000539455 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
CELF1-220ENST00000539455 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
CELF1-220ENST00000539455 DPH3Q96FX2 82 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
CELF1-220ENST00000539455 RPL37AP8A6NKH3 93 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 Q1RN00 199 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 SMIM11BQ8TCY0 68 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 LINC00167Q96N53 147 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 TMEM126AQ9H061 195 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 PLAC8Q9NZF1 115 aa3.34□□□□□ -1.87
CELF1-220ENST00000539455 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
CELF1-220ENST00000539455 TRAV23DV6A0A075B6W5 121 aa3.33□□□□□ -1.88
CELF1-220ENST00000539455 H3BUT2 72 aa3.33□□□□□ -1.88
CELF1-220ENST00000539455 CIRBP-AS1Q8TBR5 109 aa3.33□□□□□ -1.88
CELF1-220ENST00000539455 RPL28P46779 137 aaKnown RBP3.32□□□□□ -1.88
CELF1-220ENST00000539455 PSMB2P49721 201 aa3.32□□□□□ -1.88
CELF1-220ENST00000539455 UBE2BP63146 152 aa3.32□□□□□ -1.88
CELF1-220ENST00000539455 LBHQ53QV2 105 aaPredicted RBP3.32□□□□□ -1.88
CELF1-220ENST00000539455 KCNQ1DNQ9H478 68 aa3.32□□□□□ -1.88
CELF1-220ENST00000539455 USH2AO75445 5202 aa3.32□□□□□ -1.88
CELF1-220ENST00000539455 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
CELF1-220ENST00000539455 A0A1W2PPM0 123 aa3.31□□□□□ -1.88
CELF1-220ENST00000539455 PRYO14603 147 aa3.31□□□□□ -1.88
CELF1-220ENST00000539455 ZNF73O43830 326 aaPredicted RBP3.31□□□□□ -1.88
CELF1-220ENST00000539455 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
CELF1-220ENST00000539455 KRTAP4-16G5E9R7 235 aaPredicted RBP3.3□□□□□ -1.88
CELF1-220ENST00000539455 SPRR1AP35321 89 aa3.3□□□□□ -1.88
CELF1-220ENST00000539455 REG3GQ6UW15 175 aa3.3□□□□□ -1.88
CELF1-220ENST00000539455 CLEC2BQ92478 149 aa3.3□□□□□ -1.88
CELF1-220ENST00000539455 DIRC1Q969H9 104 aa3.3□□□□□ -1.88
CELF1-220ENST00000539455 FAM218AQ96MZ4 157 aa3.3□□□□□ -1.88
CELF1-220ENST00000539455 A0A1B0GV90 55 aa3.29□□□□□ -1.88
CELF1-220ENST00000539455 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
CELF1-220ENST00000539455 TCL1BO95988 128 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms