RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
YBX3-207ENST00000539204 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
YBX3-207ENST00000539204 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
YBX3-207ENST00000539204 SPANXB1Q9NS25 103 aaPredicted RBP6.78□□□□□ -1.32
YBX3-207ENST00000539204 IGLV5-39A0A0G2JS06 123 aa6.77□□□□□ -1.33
YBX3-207ENST00000539204 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
YBX3-207ENST00000539204 CEND1Q8N111 149 aa6.77□□□□□ -1.33
YBX3-207ENST00000539204 LINC00167Q96N53 147 aa6.77□□□□□ -1.33
YBX3-207ENST00000539204 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
YBX3-207ENST00000539204 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
YBX3-207ENST00000539204 KRTAP13-1Q8IUC0 172 aa6.76□□□□□ -1.33
YBX3-207ENST00000539204 TAX1BP3O14907 124 aa6.75□□□□□ -1.33
YBX3-207ENST00000539204 CKS1BP61024 79 aa6.75□□□□□ -1.33
YBX3-207ENST00000539204 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
YBX3-207ENST00000539204 HIST1H4GQ99525 98 aa6.75□□□□□ -1.33
YBX3-207ENST00000539204 C3orf22Q8N5N4 141 aa6.74□□□□□ -1.33
YBX3-207ENST00000539204 A0A1B0GWB2 263 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 TIMM17BO60830 172 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 PRSS2P07478 247 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 SMIM13P0DJ93 91 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 FXYD2P54710 66 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 LINC01561Q8N1V8 128 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 DAND5Q8N907 189 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
YBX3-207ENST00000539204 SMIM1B2RUZ4 78 aa6.72□□□□□ -1.33
YBX3-207ENST00000539204 M0R2T5 61 aa6.72□□□□□ -1.33
YBX3-207ENST00000539204 Q6ZVH6 145 aa6.72□□□□□ -1.33
YBX3-207ENST00000539204 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
YBX3-207ENST00000539204 TMEM238LA0A1B0GVL6 79 aa6.71□□□□□ -1.34
YBX3-207ENST00000539204 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
YBX3-207ENST00000539204 A6NJY4 79 aa6.71□□□□□ -1.34
YBX3-207ENST00000539204 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
YBX3-207ENST00000539204 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
YBX3-207ENST00000539204 XP32Q5T750 250 aa6.7□□□□□ -1.34
YBX3-207ENST00000539204 LITAFQ99732 161 aa6.7□□□□□ -1.34
YBX3-207ENST00000539204 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
YBX3-207ENST00000539204 SPANXCQ9NY87 97 aa6.7□□□□□ -1.34
YBX3-207ENST00000539204 HERV-K104P63124 156 aa6.69□□□□□ -1.34
YBX3-207ENST00000539204 PRLHP81277 87 aa6.69□□□□□ -1.34
YBX3-207ENST00000539204 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
YBX3-207ENST00000539204 IFITM1P13164 125 aa6.68□□□□□ -1.34
YBX3-207ENST00000539204 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
YBX3-207ENST00000539204 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
YBX3-207ENST00000539204 SPINK1P00995 79 aa6.67□□□□□ -1.34
YBX3-207ENST00000539204 RPL24P83731 157 aaKnown RBP6.67□□□□□ -1.34
YBX3-207ENST00000539204 Q8IZM0 81 aa6.67□□□□□ -1.34
YBX3-207ENST00000539204 NKAPP1Q8N9T2 125 aa6.67□□□□□ -1.34
YBX3-207ENST00000539204 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
YBX3-207ENST00000539204 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
YBX3-207ENST00000539204 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
YBX3-207ENST00000539204 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
YBX3-207ENST00000539204 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
YBX3-207ENST00000539204 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
YBX3-207ENST00000539204 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.34
YBX3-207ENST00000539204 Q8NBF4 154 aa6.65□□□□□ -1.34
YBX3-207ENST00000539204 COPS9Q8WXC6 57 aa6.65□□□□□ -1.34
YBX3-207ENST00000539204 IGLV8-61A0A075B6I0 122 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 A0A0B4J2C4 111 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 H3BUT2 72 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 CFC1P0CG37 223 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 VAMP3Q15836 100 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 RAB37Q96AX2 223 aa6.64□□□□□ -1.35
YBX3-207ENST00000539204 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
YBX3-207ENST00000539204 A4D1N5 150 aa6.63□□□□□ -1.35
YBX3-207ENST00000539204 USH2AO75445 5202 aa6.62□□□□□ -1.35
YBX3-207ENST00000539204 FABP2P12104 132 aa6.62□□□□□ -1.35
YBX3-207ENST00000539204 GTF2H5Q6ZYL4 71 aa6.62□□□□□ -1.35
YBX3-207ENST00000539204 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
YBX3-207ENST00000539204 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
YBX3-207ENST00000539204 K7ERJ3 54 aa6.61□□□□□ -1.35
YBX3-207ENST00000539204 CXCL5P42830 114 aa6.61□□□□□ -1.35
YBX3-207ENST00000539204 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
YBX3-207ENST00000539204 K7EP34 96 aa6.6□□□□□ -1.35
YBX3-207ENST00000539204 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
YBX3-207ENST00000539204 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
YBX3-207ENST00000539204 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
YBX3-207ENST00000539204 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
YBX3-207ENST00000539204 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
YBX3-207ENST00000539204 MEIG1Q5JSS6 88 aa6.59□□□□□ -1.35
YBX3-207ENST00000539204 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 M0R378 163 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 SLC25A20O43772 301 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 COX17Q14061 63 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 Q8N377 158 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
YBX3-207ENST00000539204 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
YBX3-207ENST00000539204 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
YBX3-207ENST00000539204 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
YBX3-207ENST00000539204 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
YBX3-207ENST00000539204 RPS29P62273 56 aaKnown RBP6.56□□□□□ -1.36
YBX3-207ENST00000539204 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
YBX3-207ENST00000539204 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
YBX3-207ENST00000539204 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms