RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828		Q6ZRX8	168 aa		7.19	□□□□□ -1.26
CLTCL1-205	ENST00000538828	LINC00518	Q8N0U6	118 aa		7.19	□□□□□ -1.26
CLTCL1-205	ENST00000538828	LINC00304	Q8N9R0	145 aa		7.19	□□□□□ -1.26
CLTCL1-205	ENST00000538828	ANAPC11	Q9NYG5	84 aa		7.19	□□□□□ -1.26
CLTCL1-205	ENST00000538828	TRAV23DV6	A0A075B6W5	121 aa		7.18	□□□□□ -1.26
CLTCL1-205	ENST00000538828	SMCR5	Q8TEV8	140 aa		7.18	□□□□□ -1.26
CLTCL1-205	ENST00000538828	SPANXD	Q9BXN6	97 aa		7.18	□□□□□ -1.26
CLTCL1-205	ENST00000538828	EIF4EBP3	O60516	100 aa	Predicted RBP	7.17	□□□□□ -1.26
CLTCL1-205	ENST00000538828	IFITM1	P13164	125 aa		7.17	□□□□□ -1.26
CLTCL1-205	ENST00000538828	ZNF73	O43830	326 aa	Predicted RBP	7.16	□□□□□ -1.26
CLTCL1-205	ENST00000538828	HINT1	P49773	126 aa	Predicted RBP	7.16	□□□□□ -1.26
CLTCL1-205	ENST00000538828	HIST3H2BB	Q8N257	126 aa		7.16	□□□□□ -1.26
CLTCL1-205	ENST00000538828	S100A2	P29034	98 aa		7.15	□□□□□ -1.26
CLTCL1-205	ENST00000538828	SCGB1D4	Q6XE38	83 aa		7.15	□□□□□ -1.26
CLTCL1-205	ENST00000538828	HIST1H2BL	Q99880	126 aa		7.15	□□□□□ -1.26
CLTCL1-205	ENST00000538828	UBR4	Q5T4S7	5183 aa		7.15	□□□□□ -1.26
CLTCL1-205	ENST00000538828	ANKRD39	Q53RE8	183 aa		7.14	□□□□□ -1.27
CLTCL1-205	ENST00000538828		Q9BRP9	147 aa		7.14	□□□□□ -1.27
CLTCL1-205	ENST00000538828	S100A6	P06703	90 aa		7.13	□□□□□ -1.27
CLTCL1-205	ENST00000538828	NPC2	P61916	151 aa		7.13	□□□□□ -1.27
CLTCL1-205	ENST00000538828	PRR4	Q16378	134 aa		7.13	□□□□□ -1.27
CLTCL1-205	ENST00000538828	C3orf22	Q8N5N4	141 aa		7.13	□□□□□ -1.27
CLTCL1-205	ENST00000538828	TTTY13	Q9BZ97	58 aa		7.13	□□□□□ -1.27
CLTCL1-205	ENST00000538828	TSPAN13	O95857	204 aa		7.12	□□□□□ -1.27
CLTCL1-205	ENST00000538828	SSBP3-AS1	Q7Z2R9	100 aa		7.12	□□□□□ -1.27
CLTCL1-205	ENST00000538828	TRBV7-6	A0A0J9YX20	115 aa		7.11	□□□□□ -1.27
CLTCL1-205	ENST00000538828	ERC2-IT1	O76042	136 aa		7.11	□□□□□ -1.27
CLTCL1-205	ENST00000538828	RPS29	P62273	56 aa	Known RBP	7.11	□□□□□ -1.27
CLTCL1-205	ENST00000538828	DHRS4-AS1	Q9P1J3	65 aa		7.11	□□□□□ -1.27
CLTCL1-205	ENST00000538828	HSBP1L1	C9JCN9	74 aa		7.1	□□□□□ -1.27
CLTCL1-205	ENST00000538828	SPINK1	P00995	79 aa		7.1	□□□□□ -1.27
CLTCL1-205	ENST00000538828	C4orf48	Q5BLP8	95 aa		7.1	□□□□□ -1.27
CLTCL1-205	ENST00000538828	ATOH7	Q8N100	152 aa		7.1	□□□□□ -1.27
CLTCL1-205	ENST00000538828	OR13C6P	Q8NH95	151 aa		7.1	□□□□□ -1.27
CLTCL1-205	ENST00000538828	GAGE2A	Q6NT46	116 aa		7.09	□□□□□ -1.27
CLTCL1-205	ENST00000538828	PCP2	Q8IVA1	136 aa		7.09	□□□□□ -1.27
CLTCL1-205	ENST00000538828	SPRR1B	P22528	89 aa		7.08	□□□□□ -1.28
CLTCL1-205	ENST00000538828	ELOF1	P60002	83 aa	Known RBP	7.08	□□□□□ -1.28
CLTCL1-205	ENST00000538828	SLC25A34	Q6PIV7	304 aa		7.08	□□□□□ -1.28
CLTCL1-205	ENST00000538828	TRAV13-2	A0A0B4J235	113 aa		7.07	□□□□□ -1.28
CLTCL1-205	ENST00000538828	TPRXL	Q17RH7	258 aa		7.07	□□□□□ -1.28
CLTCL1-205	ENST00000538828	FP248	Q71RG6	208 aa	Predicted RBP	7.07	□□□□□ -1.28
CLTCL1-205	ENST00000538828		Q8NBF4	154 aa		7.07	□□□□□ -1.28
CLTCL1-205	ENST00000538828		A4D1N5	150 aa		7.06	□□□□□ -1.28
CLTCL1-205	ENST00000538828	MUSTN1	Q8IVN3	82 aa		7.06	□□□□□ -1.28
CLTCL1-205	ENST00000538828		A0A1B0GWB2	263 aa		7.05	□□□□□ -1.28
CLTCL1-205	ENST00000538828	COX7B	P24311	80 aa		7.05	□□□□□ -1.28
CLTCL1-205	ENST00000538828	C6orf99	Q4VX62	202 aa		7.05	□□□□□ -1.28
CLTCL1-205	ENST00000538828	LPA	P08519	4548 aa		7.04	□□□□□ -1.28
CLTCL1-205	ENST00000538828	MOBP	Q13875	183 aa		7.03	□□□□□ -1.28
CLTCL1-205	ENST00000538828	IGLV7-46	A0A075B6I9	117 aa		7.02	□□□□□ -1.29
CLTCL1-205	ENST00000538828	DLEU1	O43261	78 aa		7.02	□□□□□ -1.29
CLTCL1-205	ENST00000538828	IGLV9-49	A0A0B4J1Y8	123 aa		7.01	□□□□□ -1.29
CLTCL1-205	ENST00000538828		A6NDN8	102 aa		7.01	□□□□□ -1.29
CLTCL1-205	ENST00000538828	NHP2	Q9NX24	153 aa	Known RBP	7.01	□□□□□ -1.29
CLTCL1-205	ENST00000538828	SCGB1D1	O95968	90 aa		7	□□□□□ -1.29
CLTCL1-205	ENST00000538828	COX8A	P10176	69 aa		7	□□□□□ -1.29
CLTCL1-205	ENST00000538828	ST20-AS1	Q8NBB2	130 aa		7	□□□□□ -1.29
CLTCL1-205	ENST00000538828	RETNLB	Q9BQ08	111 aa		7	□□□□□ -1.29
CLTCL1-205	ENST00000538828	LAMTOR3	Q9UHA4	124 aa		7	□□□□□ -1.29
CLTCL1-205	ENST00000538828	TMA7	Q9Y2S6	64 aa	Known RBP	7	□□□□□ -1.29
CLTCL1-205	ENST00000538828	IGLV5-48	A0A075B6I7	105 aa		6.99	□□□□□ -1.29
CLTCL1-205	ENST00000538828	TEX49	A0A1B0GTD5	131 aa		6.99	□□□□□ -1.29
CLTCL1-205	ENST00000538828	SLC25A20	O43772	301 aa		6.98	□□□□□ -1.29
CLTCL1-205	ENST00000538828	C9orf153	Q5TBE3	101 aa		6.98	□□□□□ -1.29
CLTCL1-205	ENST00000538828		Q8N377	158 aa		6.98	□□□□□ -1.29
CLTCL1-205	ENST00000538828	CD164	Q04900	197 aa		6.97	□□□□□ -1.29
CLTCL1-205	ENST00000538828	VAMP3	Q15836	100 aa		6.97	□□□□□ -1.29
CLTCL1-205	ENST00000538828	TAL2	Q16559	108 aa		6.97	□□□□□ -1.29
CLTCL1-205	ENST00000538828	SMIM11B	Q8TCY0	68 aa		6.97	□□□□□ -1.29
CLTCL1-205	ENST00000538828	RNF213	Q63HN8	5207 aa		6.97	□□□□□ -1.29
CLTCL1-205	ENST00000538828	CDIP1	Q9H305	208 aa		6.96	□□□□□ -1.3
CLTCL1-205	ENST00000538828	HIGD1B	Q9P298	99 aa		6.95	□□□□□ -1.3
CLTCL1-205	ENST00000538828	LINC01547	P58512	204 aa	Predicted RBP	6.94	□□□□□ -1.3
CLTCL1-205	ENST00000538828	HIST1H4G	Q99525	98 aa		6.94	□□□□□ -1.3
CLTCL1-205	ENST00000538828	LIMD2	Q9BT23	127 aa		6.94	□□□□□ -1.3
CLTCL1-205	ENST00000538828	PRO1933	Q9H354	126 aa		6.94	□□□□□ -1.3
CLTCL1-205	ENST00000538828	KRTAP13-3	Q3SY46	172 aa		6.93	□□□□□ -1.3
CLTCL1-205	ENST00000538828		Q5XG85	94 aa		6.93	□□□□□ -1.3
CLTCL1-205	ENST00000538828	BVES-AS1	Q5T3Y7	98 aa		6.92	□□□□□ -1.3
CLTCL1-205	ENST00000538828	LINC00575	Q6W349	94 aa		6.92	□□□□□ -1.3
CLTCL1-205	ENST00000538828	SMIM29	Q86T20	159 aa		6.92	□□□□□ -1.3
CLTCL1-205	ENST00000538828		A0A0U1RQV1	116 aa		6.91	□□□□□ -1.3
CLTCL1-205	ENST00000538828	VAMP8	Q9BV40	100 aa		6.91	□□□□□ -1.3
CLTCL1-205	ENST00000538828	SPATA45	Q537H7	98 aa		6.9	□□□□□ -1.3
CLTCL1-205	ENST00000538828	DEFB105A	Q8NG35	78 aa		6.9	□□□□□ -1.3
CLTCL1-205	ENST00000538828	PPDPFL	Q8WWR9	84 aa		6.9	□□□□□ -1.3
CLTCL1-205	ENST00000538828	hADV29S1	A0JD25	119 aa		6.89	□□□□□ -1.31
CLTCL1-205	ENST00000538828		Q1RN00	199 aa		6.89	□□□□□ -1.31
CLTCL1-205	ENST00000538828	PAM16	Q9Y3D7	125 aa		6.89	□□□□□ -1.31
CLTCL1-205	ENST00000538828		A0A0B4J2C4	111 aa		6.88	□□□□□ -1.31
CLTCL1-205	ENST00000538828	C14orf144	Q96I85	54 aa		6.88	□□□□□ -1.31
CLTCL1-205	ENST00000538828		H7C2G1	150 aa		6.87	□□□□□ -1.31
CLTCL1-205	ENST00000538828	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	6.87	□□□□□ -1.31
CLTCL1-205	ENST00000538828	IGLV8-61	A0A075B6I0	122 aa		6.86	□□□□□ -1.31
CLTCL1-205	ENST00000538828	CFC1B	P0CG36	223 aa		6.86	□□□□□ -1.31
CLTCL1-205	ENST00000538828	CFC1	P0CG37	223 aa		6.86	□□□□□ -1.31
CLTCL1-205	ENST00000538828	C2orf91	Q6ZV80	131 aa		6.86	□□□□□ -1.31
CLTCL1-205	ENST00000538828	LOC105371267	A0A1B0GV96	52 aa		6.85	□□□□□ -1.31
CLTCL1-205	ENST00000538828	TMEM238L	A0A1B0GVL6	79 aa		6.85	□□□□□ -1.31

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