RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 Q8NAQ8 132 aa7.94□□□□□ -1.14
USP3-203ENST00000538686 TRIOBPQ9H2D6 2365 aa7.94□□□□□ -1.14
USP3-203ENST00000538686 LAMA5O15230 3695 aa7.94□□□□□ -1.14
USP3-203ENST00000538686 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
USP3-203ENST00000538686 LINC00476Q8WZB0 136 aa7.91□□□□□ -1.14
USP3-203ENST00000538686 CCL19Q99731 98 aa7.91□□□□□ -1.14
USP3-203ENST00000538686 NOTCH3Q9UM47 2321 aa7.91□□□□□ -1.14
USP3-203ENST00000538686 C19orf73Q9NVV2 129 aa7.91□□□□□ -1.14
USP3-203ENST00000538686 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
USP3-203ENST00000538686 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
USP3-203ENST00000538686 SPRR1AP35321 89 aa7.9□□□□□ -1.14
USP3-203ENST00000538686 A8MWP4 228 aa7.9□□□□□ -1.15
USP3-203ENST00000538686 RTL8CO15255 209 aa7.9□□□□□ -1.15
USP3-203ENST00000538686 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.15
USP3-203ENST00000538686 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.15
USP3-203ENST00000538686 MAP1AP78559 2803 aaPredicted RBP7.87□□□□□ -1.15
USP3-203ENST00000538686 DEFB131BA0A096LNP1 70 aa7.87□□□□□ -1.15
USP3-203ENST00000538686 RETNLBQ9BQ08 111 aa7.87□□□□□ -1.15
USP3-203ENST00000538686 IGLV8-61A0A075B6I0 122 aa7.87□□□□□ -1.15
USP3-203ENST00000538686 IGFL1Q6UW32 110 aa7.87□□□□□ -1.15
USP3-203ENST00000538686 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
USP3-203ENST00000538686 ATMQ13315 3056 aa7.86□□□□□ -1.15
USP3-203ENST00000538686 A0A087WSZ3 146 aa7.86□□□□□ -1.15
USP3-203ENST00000538686 ASH1LQ9NR48 2969 aaKnown RBP7.86□□□□□ -1.15
USP3-203ENST00000538686 IGLV1-51P01701 117 aa7.85□□□□□ -1.15
USP3-203ENST00000538686 HRES1P13985 223 aa7.85□□□□□ -1.15
USP3-203ENST00000538686 PRO3102Q9H379 93 aa7.85□□□□□ -1.15
USP3-203ENST00000538686 ANKRD11Q6UB99 2663 aaPredicted RBP7.85□□□□□ -1.15
USP3-203ENST00000538686 COL12A1Q99715 3063 aa7.84□□□□□ -1.15
USP3-203ENST00000538686 RPL37AP61513 92 aaKnown RBP7.84□□□□□ -1.15
USP3-203ENST00000538686 CELSR1Q9NYQ6 3014 aa7.84□□□□□ -1.15
USP3-203ENST00000538686 PCOTHQ58A44 107 aa7.83□□□□□ -1.16
USP3-203ENST00000538686 RPL37AP8A6NKH3 93 aa7.83□□□□□ -1.16
USP3-203ENST00000538686 X6R8D5 127 aa7.82□□□□□ -1.16
USP3-203ENST00000538686 Q6ZR54 194 aa7.82□□□□□ -1.16
USP3-203ENST00000538686 C15orf56Q8N910 161 aa7.82□□□□□ -1.16
USP3-203ENST00000538686 H0Y9J4 135 aa7.8□□□□□ -1.16
USP3-203ENST00000538686 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
USP3-203ENST00000538686 TLX1NBP0CAT3 122 aa7.8□□□□□ -1.16
USP3-203ENST00000538686 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
USP3-203ENST00000538686 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
USP3-203ENST00000538686 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
USP3-203ENST00000538686 LINC00472Q9H8W2 130 aa7.78□□□□□ -1.16
USP3-203ENST00000538686 CSPG4Q6UVK1 2322 aa7.77□□□□□ -1.17
USP3-203ENST00000538686 SPG11Q96JI7 2443 aa7.75□□□□□ -1.17
USP3-203ENST00000538686 OTOGLQ3ZCN5 2332 aa7.75□□□□□ -1.17
USP3-203ENST00000538686 CHD6Q8TD26 2715 aa7.75□□□□□ -1.17
USP3-203ENST00000538686 CSAG1Q6PB30 78 aa7.74□□□□□ -1.17
USP3-203ENST00000538686 ITPR1Q14643 2758 aa7.74□□□□□ -1.17
USP3-203ENST00000538686 TLN1Q9Y490 2541 aaKnown RBP7.74□□□□□ -1.17
USP3-203ENST00000538686 NBPF19A0A087WUL8 3843 aa7.72□□□□□ -1.17
USP3-203ENST00000538686 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
USP3-203ENST00000538686 ACYP2P14621 99 aa7.71□□□□□ -1.18
USP3-203ENST00000538686 A0A1B0GU69 56 aa7.7□□□□□ -1.18
USP3-203ENST00000538686 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
USP3-203ENST00000538686 A0A0G2JQZ4 141 aa7.69□□□□□ -1.18
USP3-203ENST00000538686 A0A1W2PNN7 141 aa7.69□□□□□ -1.18
USP3-203ENST00000538686 UQCR11O14957 56 aa7.69□□□□□ -1.18
USP3-203ENST00000538686 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
USP3-203ENST00000538686 AKAP9Q99996 3911 aa7.68□□□□□ -1.18
USP3-203ENST00000538686 GVINP1Q7Z2Y8 2422 aa7.68□□□□□ -1.18
USP3-203ENST00000538686 CRYBG3Q68DQ2 2970 aa7.68□□□□□ -1.18
USP3-203ENST00000538686 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
USP3-203ENST00000538686 ATRXP46100 2492 aa7.66□□□□□ -1.18
USP3-203ENST00000538686 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
USP3-203ENST00000538686 MUC3AQ02505 3323 aa7.66□□□□□ -1.18
USP3-203ENST00000538686 VPS13CQ709C8 3753 aa7.65□□□□□ -1.19
USP3-203ENST00000538686 HTN3P15516 51 aa7.64□□□□□ -1.19
USP3-203ENST00000538686 FAM168BA1KXE4 195 aa7.63□□□□□ -1.19
USP3-203ENST00000538686 TLN2Q9Y4G6 2542 aa7.63□□□□□ -1.19
USP3-203ENST00000538686 H3BNG1 76 aa7.63□□□□□ -1.19
USP3-203ENST00000538686 SPRR1BP22528 89 aa7.63□□□□□ -1.19
USP3-203ENST00000538686 C8orf17Q9NRJ1 99 aa7.63□□□□□ -1.19
USP3-203ENST00000538686 NCOR2Q9Y618 2525 aa7.62□□□□□ -1.19
USP3-203ENST00000538686 DEFB4AO15263 64 aa7.62□□□□□ -1.19
USP3-203ENST00000538686 IGHV6-1A0A0B4J1U7 121 aa7.6□□□□□ -1.19
USP3-203ENST00000538686 ROMO1P60602 79 aa7.6□□□□□ -1.19
USP3-203ENST00000538686 DEFB135Q30KP9 77 aa7.6□□□□□ -1.19
USP3-203ENST00000538686 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.19
USP3-203ENST00000538686 DEFB123Q8N688 67 aa7.59□□□□□ -1.19
USP3-203ENST00000538686 HIVEP3Q5T1R4 2406 aa7.59□□□□□ -1.19
USP3-203ENST00000538686 MAPK1IP1LQ8NDC0 245 aa7.58□□□□□ -1.2
USP3-203ENST00000538686 ZNF861PO60384 105 aa7.58□□□□□ -1.2
USP3-203ENST00000538686 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
USP3-203ENST00000538686 MRPL34Q9BQ48 92 aaKnown RBP7.58□□□□□ -1.2
USP3-203ENST00000538686 NBASA2RRP1 2371 aa7.57□□□□□ -1.2
USP3-203ENST00000538686 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
USP3-203ENST00000538686 CSMD2Q7Z408 3487 aa7.57□□□□□ -1.2
USP3-203ENST00000538686 SETXQ7Z333 2677 aaKnown RBP7.56□□□□□ -1.2
USP3-203ENST00000538686 JMJD1CQ15652 2540 aa7.56□□□□□ -1.2
USP3-203ENST00000538686 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
USP3-203ENST00000538686 A0A1B0GVX0 72 aa7.54□□□□□ -1.2
USP3-203ENST00000538686 APCP25054 2843 aa7.53□□□□□ -1.2
USP3-203ENST00000538686 PRLHP81277 87 aa7.53□□□□□ -1.2
USP3-203ENST00000538686 FN1P02751 2386 aaKnown RBP7.53□□□□□ -1.2
USP3-203ENST00000538686 CDK2AP2O75956 126 aa7.52□□□□□ -1.21
USP3-203ENST00000538686 Q96NJ1 140 aa7.52□□□□□ -1.21
USP3-203ENST00000538686 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
USP3-203ENST00000538686 CEP295Q9C0D2 2601 aa7.51□□□□□ -1.21
USP3-203ENST00000538686 RIF1Q5UIP0 2472 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms