RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KCNQ1DNQ9H478 68 aa7.32□□□□□ -1.24
LINC00346-201ENST00000538077 LRRK2Q5S007 2527 aa7.32□□□□□ -1.24
LINC00346-201ENST00000538077 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
LINC00346-201ENST00000538077 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
LINC00346-201ENST00000538077 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
LINC00346-201ENST00000538077 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
LINC00346-201ENST00000538077 COA5Q86WW8 74 aa7.31□□□□□ -1.24
LINC00346-201ENST00000538077 C8orf17Q9NRJ1 99 aa7.3□□□□□ -1.24
LINC00346-201ENST00000538077 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
LINC00346-201ENST00000538077 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
LINC00346-201ENST00000538077 PSORS1C2Q9UIG4 136 aa7.3□□□□□ -1.24
LINC00346-201ENST00000538077 LINC01600Q96MT4 127 aa7.3□□□□□ -1.24
LINC00346-201ENST00000538077 A0A1B0GW54 56 aa7.29□□□□□ -1.24
LINC00346-201ENST00000538077 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
LINC00346-201ENST00000538077 H3BPC8 53 aa7.29□□□□□ -1.24
LINC00346-201ENST00000538077 REV3LO60673 3130 aa7.29□□□□□ -1.24
LINC00346-201ENST00000538077 Q8N377 158 aa7.27□□□□□ -1.24
LINC00346-201ENST00000538077 CACNA1AO00555 2505 aa7.27□□□□□ -1.25
LINC00346-201ENST00000538077 A0A1B0GVX0 72 aa7.27□□□□□ -1.25
LINC00346-201ENST00000538077 A0A0D9SG42 100 aa7.26□□□□□ -1.25
LINC00346-201ENST00000538077 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
LINC00346-201ENST00000538077 ERC2-IT1O76042 136 aa7.25□□□□□ -1.25
LINC00346-201ENST00000538077 Q8N1X5 172 aa7.25□□□□□ -1.25
LINC00346-201ENST00000538077 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
LINC00346-201ENST00000538077 KLK9Q2XQG4 91 aa7.24□□□□□ -1.25
LINC00346-201ENST00000538077 CD164Q04900 197 aa7.24□□□□□ -1.25
LINC00346-201ENST00000538077 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
LINC00346-201ENST00000538077 LINC00336Q6ZUF6 198 aa7.24□□□□□ -1.25
LINC00346-201ENST00000538077 TNP2Q05952 138 aa7.23□□□□□ -1.25
LINC00346-201ENST00000538077 C9orf163Q8N9P6 203 aa7.23□□□□□ -1.25
LINC00346-201ENST00000538077 PRUNE2Q8WUY3 3088 aa7.23□□□□□ -1.25
LINC00346-201ENST00000538077 WDFY3Q8IZQ1 3526 aa7.22□□□□□ -1.25
LINC00346-201ENST00000538077 A8MUN3 132 aa7.22□□□□□ -1.25
LINC00346-201ENST00000538077 KRTAP1-1Q07627 177 aa7.22□□□□□ -1.25
LINC00346-201ENST00000538077 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
LINC00346-201ENST00000538077 ZNF575Q86XF7 245 aa7.21□□□□□ -1.26
LINC00346-201ENST00000538077 PIEZO1Q92508 2521 aa7.2□□□□□ -1.26
LINC00346-201ENST00000538077 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
LINC00346-201ENST00000538077 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
LINC00346-201ENST00000538077 C2CD3Q4AC94 2353 aa7.2□□□□□ -1.26
LINC00346-201ENST00000538077 IGLV5-48A0A075B6I7 105 aa7.19□□□□□ -1.26
LINC00346-201ENST00000538077 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
LINC00346-201ENST00000538077 TRANK1O15050 2925 aa7.18□□□□□ -1.26
LINC00346-201ENST00000538077 JMJD1CQ15652 2540 aa7.17□□□□□ -1.26
LINC00346-201ENST00000538077 LINC00612Q8N6U2 182 aa7.17□□□□□ -1.26
LINC00346-201ENST00000538077 M0R2T5 61 aa7.17□□□□□ -1.26
LINC00346-201ENST00000538077 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
LINC00346-201ENST00000538077 KTN1-AS1Q86SY8 53 aa7.16□□□□□ -1.26
LINC00346-201ENST00000538077 PLA2G2DQ9UNK4 145 aa7.16□□□□□ -1.26
LINC00346-201ENST00000538077 CRIPTQ9P021 101 aa7.15□□□□□ -1.26
LINC00346-201ENST00000538077 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
LINC00346-201ENST00000538077 UQCR11O14957 56 aa7.14□□□□□ -1.27
LINC00346-201ENST00000538077 ABCA12Q86UK0 2595 aa7.14□□□□□ -1.27
LINC00346-201ENST00000538077 ZNF462Q96JM2 2506 aa7.13□□□□□ -1.27
LINC00346-201ENST00000538077 CNBPP62633 177 aaKnown RBP7.13□□□□□ -1.27
LINC00346-201ENST00000538077 Q6ZSA8 131 aa7.13□□□□□ -1.27
LINC00346-201ENST00000538077 LCA10Q71F78 164 aa7.13□□□□□ -1.27
LINC00346-201ENST00000538077 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
LINC00346-201ENST00000538077 DMDP11532 3685 aa7.12□□□□□ -1.27
LINC00346-201ENST00000538077 ANKRD17O75179 2603 aaKnown RBP7.12□□□□□ -1.27
LINC00346-201ENST00000538077 VCANP13611 3396 aa7.11□□□□□ -1.27
LINC00346-201ENST00000538077 FN1P02751 2386 aaKnown RBP7.11□□□□□ -1.27
LINC00346-201ENST00000538077 TLN1Q9Y490 2541 aaKnown RBP7.11□□□□□ -1.27
LINC00346-201ENST00000538077 SPEGQ15772 3267 aa7.1□□□□□ -1.27
LINC00346-201ENST00000538077 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
LINC00346-201ENST00000538077 MYO18BQ8IUG5 2567 aa7.1□□□□□ -1.27
LINC00346-201ENST00000538077 COL6A3P12111 3177 aa7.09□□□□□ -1.27
LINC00346-201ENST00000538077 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
LINC00346-201ENST00000538077 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
LINC00346-201ENST00000538077 FREM2Q5SZK8 3169 aa7.07□□□□□ -1.28
LINC00346-201ENST00000538077 H3BS24 57 aa7.06□□□□□ -1.28
LINC00346-201ENST00000538077 LAMA1P25391 3075 aa7.06□□□□□ -1.28
LINC00346-201ENST00000538077 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
LINC00346-201ENST00000538077 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
LINC00346-201ENST00000538077 ANKRD11Q6UB99 2663 aaPredicted RBP7.05□□□□□ -1.28
LINC00346-201ENST00000538077 ZFYVE26Q68DK2 2539 aa7.05□□□□□ -1.28
LINC00346-201ENST00000538077 H7BZZ5 65 aa7.04□□□□□ -1.28
LINC00346-201ENST00000538077 DOPEY1Q5JWR5 2465 aa7.04□□□□□ -1.28
LINC00346-201ENST00000538077 ASPMQ8IZT6 3477 aa7.02□□□□□ -1.29
LINC00346-201ENST00000538077 WDFY4Q6ZS81 3184 aa7.01□□□□□ -1.29
LINC00346-201ENST00000538077 TLN2Q9Y4G6 2542 aa7□□□□□ -1.29
LINC00346-201ENST00000538077 MYO9AB2RTY4 2548 aa7□□□□□ -1.29
LINC00346-201ENST00000538077 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
LINC00346-201ENST00000538077 WIPF1O43516 503 aa6.98□□□□□ -1.29
LINC00346-201ENST00000538077 VPS13AQ96RL7 3174 aa6.97□□□□□ -1.29
LINC00346-201ENST00000538077 POLQO75417 2590 aa6.97□□□□□ -1.29
LINC00346-201ENST00000538077 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.29
LINC00346-201ENST00000538077 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
LINC00346-201ENST00000538077 Q5VSD8 79 aa6.94□□□□□ -1.3
LINC00346-201ENST00000538077 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
LINC00346-201ENST00000538077 USP9XQ93008 2570 aaPredicted RBP6.94□□□□□ -1.3
LINC00346-201ENST00000538077 SPTBN4Q9H254 2564 aa6.93□□□□□ -1.3
LINC00346-201ENST00000538077 S4R3F8 94 aa6.93□□□□□ -1.3
LINC00346-201ENST00000538077 TRIOO75962 3097 aa6.91□□□□□ -1.3
LINC00346-201ENST00000538077 HRES1P13985 223 aa6.9□□□□□ -1.31
LINC00346-201ENST00000538077 FASNP49327 2511 aaKnown RBP6.9□□□□□ -1.31
LINC00346-201ENST00000538077 ACANP16112 2415 aa6.89□□□□□ -1.31
LINC00346-201ENST00000538077 SETD2Q9BYW2 2564 aaPredicted RBP6.89□□□□□ -1.31
LINC00346-201ENST00000538077 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
LINC00346-201ENST00000538077 Q1T7F1 81 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms