RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SMIM29Q86T20 159 aa7.4□□□□□ -1.22
CLSTN3-207ENST00000537408 LAMA5O15230 3695 aa7.4□□□□□ -1.22
CLSTN3-207ENST00000537408 UTP20O75691 2785 aaKnown RBP7.4□□□□□ -1.23
CLSTN3-207ENST00000537408 Q5VV11 94 aa7.39□□□□□ -1.23
CLSTN3-207ENST00000537408 NSD1Q96L73 2696 aaPredicted RBP7.39□□□□□ -1.23
CLSTN3-207ENST00000537408 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
CLSTN3-207ENST00000537408 ETDCA0A1B0GVM5 59 aa7.39□□□□□ -1.23
CLSTN3-207ENST00000537408 ODF3L2Q3SX64 289 aa7.39□□□□□ -1.23
CLSTN3-207ENST00000537408 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-207ENST00000537408 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
CLSTN3-207ENST00000537408 LCA10Q71F78 164 aa7.38□□□□□ -1.23
CLSTN3-207ENST00000537408 TENM4Q6N022 2769 aa7.38□□□□□ -1.23
CLSTN3-207ENST00000537408 IGLV4-60A0A075B6I1 120 aa7.37□□□□□ -1.23
CLSTN3-207ENST00000537408 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
CLSTN3-207ENST00000537408 NBEAL1Q6ZS30 2694 aa7.37□□□□□ -1.23
CLSTN3-207ENST00000537408 A8MTW9 85 aa7.37□□□□□ -1.23
CLSTN3-207ENST00000537408 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
CLSTN3-207ENST00000537408 MP68P56378 58 aa7.37□□□□□ -1.23
CLSTN3-207ENST00000537408 KRTAP10-3P60369 221 aa7.35□□□□□ -1.23
CLSTN3-207ENST00000537408 C3orf84H3BNL1 204 aa7.34□□□□□ -1.23
CLSTN3-207ENST00000537408 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
CLSTN3-207ENST00000537408 H3BS24 57 aa7.33□□□□□ -1.24
CLSTN3-207ENST00000537408 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
CLSTN3-207ENST00000537408 LY6G6CO95867 125 aa7.33□□□□□ -1.24
CLSTN3-207ENST00000537408 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
CLSTN3-207ENST00000537408 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
CLSTN3-207ENST00000537408 IGKV2D-24A0A075B6R9 120 aa7.32□□□□□ -1.24
CLSTN3-207ENST00000537408 LCE6AA0A183 80 aa7.32□□□□□ -1.24
CLSTN3-207ENST00000537408 K7EIL1 84 aa7.32□□□□□ -1.24
CLSTN3-207ENST00000537408 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
CLSTN3-207ENST00000537408 DEFB131BA0A096LNP1 70 aa7.32□□□□□ -1.24
CLSTN3-207ENST00000537408 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 A6NN06 94 aa7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 A8MU10 97 aa7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 IGLV6-57P01721 117 aa7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 CAMK2N2Q96S95 79 aa7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
CLSTN3-207ENST00000537408 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
CLSTN3-207ENST00000537408 Q75L30 129 aa7.3□□□□□ -1.24
CLSTN3-207ENST00000537408 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
CLSTN3-207ENST00000537408 A0A0J9YWU9 116 aa7.3□□□□□ -1.24
CLSTN3-207ENST00000537408 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
CLSTN3-207ENST00000537408 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
CLSTN3-207ENST00000537408 Q8N9P0 234 aaPredicted RBP7.29□□□□□ -1.24
CLSTN3-207ENST00000537408 BSNQ9UPA5 3926 aa7.29□□□□□ -1.24
CLSTN3-207ENST00000537408 IGHV4-28A0A0C4DH34 117 aa7.28□□□□□ -1.24
CLSTN3-207ENST00000537408 A0A1B0GW54 56 aa7.28□□□□□ -1.24
CLSTN3-207ENST00000537408 EGFEM1PQ0D2K5 195 aa7.28□□□□□ -1.24
CLSTN3-207ENST00000537408 VPREB1P12018 145 aa7.28□□□□□ -1.24
CLSTN3-207ENST00000537408 REG3AQ06141 175 aa7.27□□□□□ -1.25
CLSTN3-207ENST00000537408 CELSR2Q9HCU4 2923 aa7.26□□□□□ -1.25
CLSTN3-207ENST00000537408 LINC00612Q8N6U2 182 aa7.26□□□□□ -1.25
CLSTN3-207ENST00000537408 CHCHD10Q8WYQ3 142 aaPredicted RBP7.26□□□□□ -1.25
CLSTN3-207ENST00000537408 Q9BRP9 147 aa7.25□□□□□ -1.25
CLSTN3-207ENST00000537408 TACC2O95359 2948 aa7.24□□□□□ -1.25
CLSTN3-207ENST00000537408 KRTAP10-11P60412 298 aa7.24□□□□□ -1.25
CLSTN3-207ENST00000537408 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
CLSTN3-207ENST00000537408 KIAA0087Q14695 138 aa7.24□□□□□ -1.25
CLSTN3-207ENST00000537408 A0A1B0GUV1 79 aa7.24□□□□□ -1.25
CLSTN3-207ENST00000537408 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
CLSTN3-207ENST00000537408 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
CLSTN3-207ENST00000537408 DEFB105AQ8NG35 78 aa7.22□□□□□ -1.25
CLSTN3-207ENST00000537408 CASC2Q6XLA1 102 aa7.22□□□□□ -1.25
CLSTN3-207ENST00000537408 Q8NDZ9 215 aa7.22□□□□□ -1.25
CLSTN3-207ENST00000537408 CSMD1Q96PZ7 3565 aa7.21□□□□□ -1.26
CLSTN3-207ENST00000537408 KPRPQ5T749 579 aaPredicted RBP7.21□□□□□ -1.26
CLSTN3-207ENST00000537408 H3BPC8 53 aa7.2□□□□□ -1.26
CLSTN3-207ENST00000537408 UNQ6190/PRO20217Q6UXQ8 127 aa7.2□□□□□ -1.26
CLSTN3-207ENST00000537408 CRYBG3Q68DQ2 2970 aa7.2□□□□□ -1.26
CLSTN3-207ENST00000537408 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
CLSTN3-207ENST00000537408 MOBPQ13875 183 aa7.18□□□□□ -1.26
CLSTN3-207ENST00000537408 LRBAP50851 2863 aa7.18□□□□□ -1.26
CLSTN3-207ENST00000537408 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
CLSTN3-207ENST00000537408 XAGE1AQ9HD64 81 aa7.18□□□□□ -1.26
CLSTN3-207ENST00000537408 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
CLSTN3-207ENST00000537408 K7EQZ3 153 aa7.16□□□□□ -1.26
CLSTN3-207ENST00000537408 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
CLSTN3-207ENST00000537408 H0Y9P7 68 aa7.15□□□□□ -1.26
CLSTN3-207ENST00000537408 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
CLSTN3-207ENST00000537408 COA5Q86WW8 74 aa7.15□□□□□ -1.26
CLSTN3-207ENST00000537408 WFDC13Q8IUB5 93 aa7.15□□□□□ -1.27
CLSTN3-207ENST00000537408 LINC01554Q52M75 96 aa7.15□□□□□ -1.27
CLSTN3-207ENST00000537408 C1orf137Q5JT78 98 aa7.15□□□□□ -1.27
CLSTN3-207ENST00000537408 DCHS2Q6V1P9 2916 aa7.14□□□□□ -1.27
CLSTN3-207ENST00000537408 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
CLSTN3-207ENST00000537408 LELP1Q5T871 98 aa7.14□□□□□ -1.27
CLSTN3-207ENST00000537408 Q8NBF4 154 aa7.13□□□□□ -1.27
CLSTN3-207ENST00000537408 SVEP1Q4LDE5 3571 aa7.13□□□□□ -1.27
CLSTN3-207ENST00000537408 WFDC10BQ8IUB3 73 aa7.13□□□□□ -1.27
CLSTN3-207ENST00000537408 IGLV5-48A0A075B6I7 105 aa7.12□□□□□ -1.27
CLSTN3-207ENST00000537408 DSCR10P59022 87 aa7.12□□□□□ -1.27
CLSTN3-207ENST00000537408 GVQW2A0A096LPI5 108 aaPredicted RBP7.12□□□□□ -1.27
CLSTN3-207ENST00000537408 PDZD2O15018 2839 aa7.11□□□□□ -1.27
CLSTN3-207ENST00000537408 LINC00313P59037 77 aa7.11□□□□□ -1.27
CLSTN3-207ENST00000537408 ZFHX3Q15911 3703 aa7.11□□□□□ -1.27
CLSTN3-207ENST00000537408 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
CLSTN3-207ENST00000537408 ZANQ9Y493 2812 aa7.1□□□□□ -1.27
CLSTN3-207ENST00000537408 A0A1W2PNM2 257 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms