RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MT1LQ93083 61 aa-0.93□□□□□ -2.56
CCDC7-208ENST00000537047 CRIPTQ9P021 101 aa-0.93□□□□□ -2.56
CCDC7-208ENST00000537047 MYOM2P54296 1465 aa-0.93□□□□□ -2.56
CCDC7-208ENST00000537047 ASXL1Q8IXJ9 1541 aa-0.94□□□□□ -2.56
CCDC7-208ENST00000537047 RPL13AP3Q6NVV1 102 aa-0.94□□□□□ -2.56
CCDC7-208ENST00000537047 PLEKHH2Q8IVE3 1493 aa-0.94□□□□□ -2.56
CCDC7-208ENST00000537047 SCN7AQ01118 1682 aa-0.94□□□□□ -2.56
CCDC7-208ENST00000537047 CUL7Q14999 1698 aa-0.94□□□□□ -2.56
CCDC7-208ENST00000537047 NUP188Q5SRE5 1749 aa-0.95□□□□□ -2.56
CCDC7-208ENST00000537047 PAPPA2Q9BXP8 1791 aa-0.95□□□□□ -2.56
CCDC7-208ENST00000537047 H3BQ15 152 aa-0.95□□□□□ -2.56
CCDC7-208ENST00000537047 BRCA2P51587 3418 aa-0.95□□□□□ -2.56
CCDC7-208ENST00000537047 KNL1Q8NG31 2342 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 A0A1B0GU69 56 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 I3L3M4 83 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 K7EP34 96 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 GNG4P50150 75 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 DEFB112Q30KQ8 113 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 H1FX-AS1Q4G0G2 97 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 NALCNQ8IZF0 1738 aa-0.96□□□□□ -2.56
CCDC7-208ENST00000537047 NKTRP30414 1462 aaKnown RBP-0.97□□□□□ -2.56
CCDC7-208ENST00000537047 NLRP1Q9C000 1473 aa-0.97□□□□□ -2.56
CCDC7-208ENST00000537047 CRYM-AS1A6NIL9 109 aa-0.97□□□□□ -2.56
CCDC7-208ENST00000537047 KRTDAPP60985 99 aa-0.97□□□□□ -2.56
CCDC7-208ENST00000537047 TOP2BQ02880 1626 aa-0.97□□□□□ -2.57
CCDC7-208ENST00000537047 UTRNP46939 3433 aa-0.98□□□□□ -2.57
CCDC7-208ENST00000537047 PPP3R1P63098 170 aa-0.98□□□□□ -2.57
CCDC7-208ENST00000537047 CGREF1Q99674 301 aa-0.98□□□□□ -2.57
CCDC7-208ENST00000537047 VAMP8Q9BV40 100 aa-0.98□□□□□ -2.57
CCDC7-208ENST00000537047 CENPFP49454 3210 aa-0.98□□□□□ -2.57
CCDC7-208ENST00000537047 CDC42BPGQ6DT37 1551 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 EFCAB10A6NFE3 127 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 RPS29P62273 56 aaKnown RBP-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 C6orf201Q7Z4U5 140 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 VPS13AQ96RL7 3174 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 EDC4Q6P2E9 1401 aaKnown RBP-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 XIRP2A4UGR9 3374 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 MAPKBP1O60336 1514 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 ARHGAP5Q13017 1502 aa-0.99□□□□□ -2.57
CCDC7-208ENST00000537047 MARF1Q9Y4F3 1742 aaKnown RBP-1□□□□□ -2.57
CCDC7-208ENST00000537047 ASPMQ8IZT6 3477 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 A0A087WVE0 104 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 LCE6AA0A183 80 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 H0YGG7 62 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 H3BQF6 201 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 CORTO00230 105 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 CCL22O00626 93 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 DLEU1O43261 78 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 SNCAP37840 140 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 KRTAP19-5Q3LI72 72 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 GOLGB1Q14789 3259 aaKnown RBP-1□□□□□ -2.57
CCDC7-208ENST00000537047 PTPN23Q9H3S7 1636 aa-1□□□□□ -2.57
CCDC7-208ENST00000537047 C7orf77A4D0Y5 90 aa-1.01□□□□□ -2.57
CCDC7-208ENST00000537047 TMEM262E9PQX1 116 aa-1.01□□□□□ -2.57
CCDC7-208ENST00000537047 NRKQ7Z2Y5 1582 aa-1.01□□□□□ -2.57
CCDC7-208ENST00000537047 PDCD11Q14690 1871 aaKnown RBP-1.01□□□□□ -2.57
CCDC7-208ENST00000537047 A0A0G2JND7 137 aa-1.02□□□□□ -2.57
CCDC7-208ENST00000537047 DEFB4AO15263 64 aa-1.02□□□□□ -2.57
CCDC7-208ENST00000537047 SMARCA2P51531 1590 aa-1.03□□□□□ -2.57
CCDC7-208ENST00000537047 H0Y9P7 68 aa-1.03□□□□□ -2.57
CCDC7-208ENST00000537047 LRRC37AA6NMS7 1700 aa-1.03□□□□□ -2.58
CCDC7-208ENST00000537047 ADAMTS12P58397 1594 aa-1.04□□□□□ -2.58
CCDC7-208ENST00000537047 A0A1B0GV90 55 aa-1.04□□□□□ -2.58
CCDC7-208ENST00000537047 S100A1P23297 94 aa-1.04□□□□□ -2.58
CCDC7-208ENST00000537047 MRPL34Q9BQ48 92 aaKnown RBP-1.04□□□□□ -2.58
CCDC7-208ENST00000537047 COL4A6Q14031 1691 aa-1.04□□□□□ -2.58
CCDC7-208ENST00000537047 SPHKAPQ2M3C7 1700 aa-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 hADV29S1A0JD25 119 aa-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 ARMS2P0C7Q2 107 aa-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 GNGT1P63211 74 aa-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 MRPS10P82664 201 aaKnown RBP-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 HSD52Q0P140 79 aa-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 EIF4G3O43432 1585 aaKnown RBP-1.05□□□□□ -2.58
CCDC7-208ENST00000537047 KIAA1551Q9HCM1 1747 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 KRTAP19-2Q3LHN2 52 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 DEFB107AQ8IZN7 70 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 CDKN2A-AS1Q9UH64 79 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 GNG8Q9UK08 70 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 PZPP20742 1482 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 CLIP1P30622 1438 aa-1.06□□□□□ -2.58
CCDC7-208ENST00000537047 TRBV25-1A0A075B6N4 114 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 TRAV30A0A087WSZ9 112 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 C9orf92A6NGG3 77 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 NDUFC1O43677 76 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 PMCHL1Q16048 86 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 PSMG4Q5JS54 123 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 HEPN1Q6WQI6 88 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 GTF2H5Q6ZYL4 71 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 WFDC9Q8NEX5 89 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 TMEM203Q969S6 136 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 CACFD1Q9UGQ2 172 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 S4R3F8 94 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 SLIT1O75093 1534 aa-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 TARBP1Q13395 1621 aaKnown RBP-1.07□□□□□ -2.58
CCDC7-208ENST00000537047 CHD1O14646 1710 aa-1.08□□□□□ -2.58
CCDC7-208ENST00000537047 H3BNG1 76 aa-1.08□□□□□ -2.58
CCDC7-208ENST00000537047 HIGD1BQ9P298 99 aa-1.08□□□□□ -2.58
CCDC7-208ENST00000537047 KNDC1Q76NI1 1749 aa-1.09□□□□□ -2.58
CCDC7-208ENST00000537047 SPTY2D1-AS1A0A0U1RR47 76 aa-1.09□□□□□ -2.58
CCDC7-208ENST00000537047 COX6B2Q6YFQ2 88 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms