RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 PRYO14603 147 aa6.72□□□□□ -1.33
RFX4-205ENST00000536722 NPC2P61916 151 aa6.72□□□□□ -1.33
RFX4-205ENST00000536722 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
RFX4-205ENST00000536722 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
RFX4-205ENST00000536722 TRBV10-2A0A0K0K1G8 114 aa6.71□□□□□ -1.34
RFX4-205ENST00000536722 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
RFX4-205ENST00000536722 TIMM17BO60830 172 aa6.7□□□□□ -1.34
RFX4-205ENST00000536722 NDUFC2O95298 119 aa6.7□□□□□ -1.34
RFX4-205ENST00000536722 SPANXB1Q9NS25 103 aaPredicted RBP6.7□□□□□ -1.34
RFX4-205ENST00000536722 PCP4L1A6NKN8 68 aa6.69□□□□□ -1.34
RFX4-205ENST00000536722 IGLV6-57P01721 117 aa6.69□□□□□ -1.34
RFX4-205ENST00000536722 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
RFX4-205ENST00000536722 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
RFX4-205ENST00000536722 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
RFX4-205ENST00000536722 LPAP08519 4548 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 C20orf202A1L168 122 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 SCGB1D1O95968 90 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 SMIM6P0DI80 62 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 DDTP30046 118 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 UBR4Q5T4S7 5183 aa6.68□□□□□ -1.34
RFX4-205ENST00000536722 CRYGAP11844 174 aa6.67□□□□□ -1.34
RFX4-205ENST00000536722 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
RFX4-205ENST00000536722 SMCR5Q8TEV8 140 aa6.67□□□□□ -1.34
RFX4-205ENST00000536722 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
RFX4-205ENST00000536722 B5MCH6 92 aa6.66□□□□□ -1.34
RFX4-205ENST00000536722 SNRPEP62304 92 aaKnown RBP6.66□□□□□ -1.34
RFX4-205ENST00000536722 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
RFX4-205ENST00000536722 C12orf57Q99622 126 aa6.66□□□□□ -1.34
RFX4-205ENST00000536722 C5orf52A6NGY3 159 aa6.65□□□□□ -1.34
RFX4-205ENST00000536722 ERC2-IT1O76042 136 aa6.65□□□□□ -1.34
RFX4-205ENST00000536722 Q9BRP9 147 aa6.65□□□□□ -1.34
RFX4-205ENST00000536722 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
RFX4-205ENST00000536722 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
RFX4-205ENST00000536722 S100A2P29034 98 aa6.64□□□□□ -1.35
RFX4-205ENST00000536722 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
RFX4-205ENST00000536722 TYMSOSQ8TAI1 123 aa6.64□□□□□ -1.35
RFX4-205ENST00000536722 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
RFX4-205ENST00000536722 TRAV23DV6A0A075B6W5 121 aa6.63□□□□□ -1.35
RFX4-205ENST00000536722 Q6ZRX8 168 aa6.63□□□□□ -1.35
RFX4-205ENST00000536722 PCP4P48539 62 aa6.62□□□□□ -1.35
RFX4-205ENST00000536722 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
RFX4-205ENST00000536722 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
RFX4-205ENST00000536722 AKR1D1P51857 326 aa6.61□□□□□ -1.35
RFX4-205ENST00000536722 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
RFX4-205ENST00000536722 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
RFX4-205ENST00000536722 TSPAN13O95857 204 aa6.6□□□□□ -1.35
RFX4-205ENST00000536722 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
RFX4-205ENST00000536722 KRTAP4-12Q9BQ66 201 aa6.6□□□□□ -1.35
RFX4-205ENST00000536722 HSBP1L1C9JCN9 74 aa6.59□□□□□ -1.35
RFX4-205ENST00000536722 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
RFX4-205ENST00000536722 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
RFX4-205ENST00000536722 LINC00304Q8N9R0 145 aa6.58□□□□□ -1.36
RFX4-205ENST00000536722 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
RFX4-205ENST00000536722 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
RFX4-205ENST00000536722 IFITM1P13164 125 aa6.57□□□□□ -1.36
RFX4-205ENST00000536722 Q6ZVH6 145 aa6.57□□□□□ -1.36
RFX4-205ENST00000536722 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
RFX4-205ENST00000536722 OR13C6PQ8NH95 151 aa6.57□□□□□ -1.36
RFX4-205ENST00000536722 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
RFX4-205ENST00000536722 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
RFX4-205ENST00000536722 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
RFX4-205ENST00000536722 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
RFX4-205ENST00000536722 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
RFX4-205ENST00000536722 C6orf99Q4VX62 202 aa6.54□□□□□ -1.36
RFX4-205ENST00000536722 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
RFX4-205ENST00000536722 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
RFX4-205ENST00000536722 PRR4Q16378 134 aa6.53□□□□□ -1.36
RFX4-205ENST00000536722 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
RFX4-205ENST00000536722 COX8AP10176 69 aa6.52□□□□□ -1.37
RFX4-205ENST00000536722 Q8NBF4 154 aa6.52□□□□□ -1.37
RFX4-205ENST00000536722 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
RFX4-205ENST00000536722 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
RFX4-205ENST00000536722 MOBPQ13875 183 aa6.51□□□□□ -1.37
RFX4-205ENST00000536722 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
RFX4-205ENST00000536722 A4D1N5 150 aa6.5□□□□□ -1.37
RFX4-205ENST00000536722 A6NDN8 102 aa6.5□□□□□ -1.37
RFX4-205ENST00000536722 DLEU1O43261 78 aa6.5□□□□□ -1.37
RFX4-205ENST00000536722 SPRR1BP22528 89 aa6.5□□□□□ -1.37
RFX4-205ENST00000536722 COX7BP24311 80 aa6.5□□□□□ -1.37
RFX4-205ENST00000536722 TRBV7-6A0A0J9YX20 115 aa6.49□□□□□ -1.37
RFX4-205ENST00000536722 HINT1P49773 126 aaPredicted RBP6.49□□□□□ -1.37
RFX4-205ENST00000536722 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
RFX4-205ENST00000536722 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
RFX4-205ENST00000536722 PAM16Q9Y3D7 125 aa6.49□□□□□ -1.37
RFX4-205ENST00000536722 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
RFX4-205ENST00000536722 LINC01547P58512 204 aaPredicted RBP6.48□□□□□ -1.37
RFX4-205ENST00000536722 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
RFX4-205ENST00000536722 C2orf91Q6ZV80 131 aa6.48□□□□□ -1.37
RFX4-205ENST00000536722 C14orf144Q96I85 54 aa6.48□□□□□ -1.37
RFX4-205ENST00000536722 A0A1B0GWB2 263 aa6.47□□□□□ -1.37
RFX4-205ENST00000536722 SPATA45Q537H7 98 aa6.47□□□□□ -1.37
RFX4-205ENST00000536722 SSBP3-AS1Q7Z2R9 100 aa6.47□□□□□ -1.37
RFX4-205ENST00000536722 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
RFX4-205ENST00000536722 SMIM29Q86T20 159 aa6.45□□□□□ -1.38
RFX4-205ENST00000536722 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
RFX4-205ENST00000536722 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
RFX4-205ENST00000536722 IGLV5-48A0A075B6I7 105 aa6.44□□□□□ -1.38
RFX4-205ENST00000536722 SPINK1P00995 79 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms