RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 NDUFC2O95298 119 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 IGKV2D-28P01615 120 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 COX8AP10176 69 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 VPREB1P12018 145 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 TTTY13Q9BZ97 58 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 SPANXCQ9NY87 97 aa6.6□□□□□ -1.35
LMO3-213ENST00000536172 TRBV10-2A0A0K0K1G8 114 aa6.59□□□□□ -1.35
LMO3-213ENST00000536172 RPL28P46779 137 aaKnown RBP6.59□□□□□ -1.35
LMO3-213ENST00000536172 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.35
LMO3-213ENST00000536172 C14orf144Q96I85 54 aa6.59□□□□□ -1.35
LMO3-213ENST00000536172 SPANXDQ9BXN6 97 aa6.59□□□□□ -1.35
LMO3-213ENST00000536172 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
LMO3-213ENST00000536172 DLEU1O43261 78 aa6.58□□□□□ -1.36
LMO3-213ENST00000536172 DDTP30046 118 aa6.58□□□□□ -1.36
LMO3-213ENST00000536172 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
LMO3-213ENST00000536172 ETDCA0A1B0GVM5 59 aa6.57□□□□□ -1.36
LMO3-213ENST00000536172 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
LMO3-213ENST00000536172 TMEM126AQ9H061 195 aa6.57□□□□□ -1.36
LMO3-213ENST00000536172 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 A6NDN8 102 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 PRYO14603 147 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 BCE1O60756 84 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 CRYGAP11844 174 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
LMO3-213ENST00000536172 TSPAN13O95857 204 aa6.55□□□□□ -1.36
LMO3-213ENST00000536172 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
LMO3-213ENST00000536172 MUC2Q02817 5179 aa6.54□□□□□ -1.36
LMO3-213ENST00000536172 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
LMO3-213ENST00000536172 LITAFQ99732 161 aa6.54□□□□□ -1.36
LMO3-213ENST00000536172 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
LMO3-213ENST00000536172 TRAV23DV6A0A075B6W5 121 aa6.53□□□□□ -1.36
LMO3-213ENST00000536172 A0A087X002 238 aa6.53□□□□□ -1.36
LMO3-213ENST00000536172 CTAG1AP78358 180 aa6.53□□□□□ -1.36
LMO3-213ENST00000536172 VAMP3Q15836 100 aa6.53□□□□□ -1.36
LMO3-213ENST00000536172 UQCR10Q9UDW1 63 aa6.53□□□□□ -1.36
LMO3-213ENST00000536172 SNCGO76070 127 aa6.52□□□□□ -1.37
LMO3-213ENST00000536172 SMIM6P0DI80 62 aa6.52□□□□□ -1.37
LMO3-213ENST00000536172 RAB37Q96AX2 223 aa6.52□□□□□ -1.37
LMO3-213ENST00000536172 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
LMO3-213ENST00000536172 HIGD1BQ9P298 99 aa6.52□□□□□ -1.37
LMO3-213ENST00000536172 TAL2Q16559 108 aa6.51□□□□□ -1.37
LMO3-213ENST00000536172 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
LMO3-213ENST00000536172 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
LMO3-213ENST00000536172 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
LMO3-213ENST00000536172 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
LMO3-213ENST00000536172 HIGD2AQ9BW72 106 aa6.5□□□□□ -1.37
LMO3-213ENST00000536172 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
LMO3-213ENST00000536172 IGLV6-57P01721 117 aa6.49□□□□□ -1.37
LMO3-213ENST00000536172 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
LMO3-213ENST00000536172 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
LMO3-213ENST00000536172 A4D1N5 150 aa6.48□□□□□ -1.37
LMO3-213ENST00000536172 TSTD3H0UI37 97 aa6.48□□□□□ -1.37
LMO3-213ENST00000536172 SLC25A20O43772 301 aa6.48□□□□□ -1.37
LMO3-213ENST00000536172 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
LMO3-213ENST00000536172 Q8NDZ9 215 aa6.48□□□□□ -1.37
LMO3-213ENST00000536172 CDIP1Q9H305 208 aa6.48□□□□□ -1.37
LMO3-213ENST00000536172 PRLHP81277 87 aa6.47□□□□□ -1.37
LMO3-213ENST00000536172 HSD52Q0P140 79 aa6.47□□□□□ -1.37
LMO3-213ENST00000536172 Q1RN00 199 aa6.47□□□□□ -1.37
LMO3-213ENST00000536172 COX7BP24311 80 aa6.46□□□□□ -1.38
LMO3-213ENST00000536172 KRTAP13-1Q8IUC0 172 aa6.46□□□□□ -1.38
LMO3-213ENST00000536172 CEND1Q8N111 149 aa6.46□□□□□ -1.38
LMO3-213ENST00000536172 NHP2Q9NX24 153 aaKnown RBP6.46□□□□□ -1.38
LMO3-213ENST00000536172 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
LMO3-213ENST00000536172 H7C2G1 150 aa6.45□□□□□ -1.38
LMO3-213ENST00000536172 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
LMO3-213ENST00000536172 C12orf57Q99622 126 aa6.45□□□□□ -1.38
LMO3-213ENST00000536172 IGLV7-46A0A075B6I9 117 aa6.44□□□□□ -1.38
LMO3-213ENST00000536172 C6orf99Q4VX62 202 aa6.44□□□□□ -1.38
LMO3-213ENST00000536172 PRO1933Q9H354 126 aa6.44□□□□□ -1.38
LMO3-213ENST00000536172 ANAPC11Q9NYG5 84 aa6.44□□□□□ -1.38
LMO3-213ENST00000536172 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 A0A1B0GWB2 263 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 B5MCH6 92 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 M0R143 59 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 SPRR1AP35321 89 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 BVES-AS1Q5T3Y7 98 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 Q6ZRX8 168 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 SMCR5Q8TEV8 140 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 RETNLBQ9BQ08 111 aa6.43□□□□□ -1.38
LMO3-213ENST00000536172 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
LMO3-213ENST00000536172 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
LMO3-213ENST00000536172 PRO1854Q9UHT4 67 aa6.42□□□□□ -1.38
LMO3-213ENST00000536172 A0A0B4J2C4 111 aa6.41□□□□□ -1.38
LMO3-213ENST00000536172 LOC105371267A0A1B0GV96 52 aa6.41□□□□□ -1.38
LMO3-213ENST00000536172 COX6CP09669 75 aa6.41□□□□□ -1.38
LMO3-213ENST00000536172 PSMB2P49721 201 aa6.41□□□□□ -1.38
LMO3-213ENST00000536172 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
LMO3-213ENST00000536172 CFC1BP0CG36 223 aa6.4□□□□□ -1.38
LMO3-213ENST00000536172 CFC1P0CG37 223 aa6.4□□□□□ -1.38
LMO3-213ENST00000536172 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
LMO3-213ENST00000536172 H0YGX0 51 aa6.39□□□□□ -1.39
LMO3-213ENST00000536172 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
LMO3-213ENST00000536172 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
LMO3-213ENST00000536172 FP248Q71RG6 208 aaPredicted RBP6.39□□□□□ -1.39
LMO3-213ENST00000536172 KRTAP4-16G5E9R7 235 aaPredicted RBP6.37□□□□□ -1.39
LMO3-213ENST00000536172 SCGB1C2P0DMR2 95 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms