RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PSPHP1	O15172	72 aa		10.37	□□□□□ -0.75
NCAPD3-213	ENST00000534532		A8MWP4	228 aa		10.35	□□□□□ -0.75
NCAPD3-213	ENST00000534532	ZNF575	Q86XF7	245 aa		10.35	□□□□□ -0.75
NCAPD3-213	ENST00000534532	TLX1NB	P0CAT3	122 aa		10.34	□□□□□ -0.75
NCAPD3-213	ENST00000534532	LITAF	Q99732	161 aa		10.33	□□□□□ -0.76
NCAPD3-213	ENST00000534532	LOC101927531	A0A1B0GV80	90 aa		10.33	□□□□□ -0.76
NCAPD3-213	ENST00000534532	LINC00528	Q8N1L1	170 aa		10.33	□□□□□ -0.76
NCAPD3-213	ENST00000534532	MRPL34	Q9BQ48	92 aa	Known RBP	10.32	□□□□□ -0.76
NCAPD3-213	ENST00000534532	PMAIP1	Q13794	54 aa		10.32	□□□□□ -0.76
NCAPD3-213	ENST00000534532	IGLV7-43	P04211	117 aa		10.32	□□□□□ -0.76
NCAPD3-213	ENST00000534532	PLA2G2D	Q9UNK4	145 aa		10.31	□□□□□ -0.76
NCAPD3-213	ENST00000534532	C9orf129	Q5T035	196 aa	Known RBP	10.3	□□□□□ -0.76
NCAPD3-213	ENST00000534532	FLNA	P21333	2647 aa	Known RBP	10.29	□□□□□ -0.76
NCAPD3-213	ENST00000534532	CNBP	P62633	177 aa	Known RBP	10.29	□□□□□ -0.76
NCAPD3-213	ENST00000534532	SMCP	P49901	116 aa	Predicted RBP	10.29	□□□□□ -0.76
NCAPD3-213	ENST00000534532	IGFL1	Q6UW32	110 aa		10.27	□□□□□ -0.77
NCAPD3-213	ENST00000534532	PSORS1C2	Q9UIG4	136 aa		10.26	□□□□□ -0.77
NCAPD3-213	ENST00000534532	ITPR3	Q14573	2671 aa		10.26	□□□□□ -0.77
NCAPD3-213	ENST00000534532	C1orf195	Q5TG92	126 aa		10.24	□□□□□ -0.77
NCAPD3-213	ENST00000534532	DSCR10	P59022	87 aa		10.24	□□□□□ -0.77
NCAPD3-213	ENST00000534532	C9orf92	A6NGG3	77 aa		10.23	□□□□□ -0.77
NCAPD3-213	ENST00000534532	OBSCN-AS1	Q96MR7	158 aa		10.23	□□□□□ -0.77
NCAPD3-213	ENST00000534532	PRRC2C	Q9Y520	2896 aa	Known RBP	10.22	□□□□□ -0.77
NCAPD3-213	ENST00000534532	PRO0461	Q9UI25	63 aa		10.22	□□□□□ -0.77
NCAPD3-213	ENST00000534532		A0A1W2PNN7	141 aa		10.22	□□□□□ -0.77
NCAPD3-213	ENST00000534532	CASC10	Q5T4H9	136 aa		10.22	□□□□□ -0.77
NCAPD3-213	ENST00000534532		K7EQZ3	153 aa		10.21	□□□□□ -0.77
NCAPD3-213	ENST00000534532	C8orf17	Q9NRJ1	99 aa		10.2	□□□□□ -0.78
NCAPD3-213	ENST00000534532	TNP2	Q05952	138 aa		10.19	□□□□□ -0.78
NCAPD3-213	ENST00000534532		A0A1B0GVX0	72 aa		10.19	□□□□□ -0.78
NCAPD3-213	ENST00000534532	ANAPC11	Q9NYG5	84 aa		10.19	□□□□□ -0.78
NCAPD3-213	ENST00000534532	GOLGB1	Q14789	3259 aa	Known RBP	10.18	□□□□□ -0.78
NCAPD3-213	ENST00000534532		Q8N377	158 aa		10.18	□□□□□ -0.78
NCAPD3-213	ENST00000534532	SPRR4	Q96PI1	79 aa		10.18	□□□□□ -0.78
NCAPD3-213	ENST00000534532	CFAP46	Q8IYW2	2715 aa		10.18	□□□□□ -0.78
NCAPD3-213	ENST00000534532	PRR15	Q8IV56	129 aa		10.17	□□□□□ -0.78
NCAPD3-213	ENST00000534532	RBM12B-AS1	Q9P1G2	102 aa		10.17	□□□□□ -0.78
NCAPD3-213	ENST00000534532	WIPF1	O43516	503 aa		10.14	□□□□□ -0.79
NCAPD3-213	ENST00000534532	IGLV5-37	A0A075B6J1	123 aa		10.13	□□□□□ -0.79
NCAPD3-213	ENST00000534532	BPTF	Q12830	3046 aa		10.11	□□□□□ -0.79
NCAPD3-213	ENST00000534532	EIF4EBP3	O60516	100 aa	Predicted RBP	10.11	□□□□□ -0.79
NCAPD3-213	ENST00000534532	IGLV8-61	A0A075B6I0	122 aa		10.11	□□□□□ -0.79
NCAPD3-213	ENST00000534532	STAB1	Q9NY15	2570 aa		10.08	□□□□□ -0.8
NCAPD3-213	ENST00000534532		A0A0G2JQZ4	141 aa		10.06	□□□□□ -0.8
NCAPD3-213	ENST00000534532	ERC2-IT1	O76042	136 aa		10.06	□□□□□ -0.8
NCAPD3-213	ENST00000534532	SETX	Q7Z333	2677 aa	Known RBP	10.05	□□□□□ -0.8
NCAPD3-213	ENST00000534532	LINC01600	Q96MT4	127 aa		10.04	□□□□□ -0.8
NCAPD3-213	ENST00000534532	IGLV7-46	A0A075B6I9	117 aa		9.99	□□□□□ -0.81
NCAPD3-213	ENST00000534532	COA5	Q86WW8	74 aa		9.99	□□□□□ -0.81
NCAPD3-213	ENST00000534532		Q6ZSA8	131 aa		9.99	□□□□□ -0.81
NCAPD3-213	ENST00000534532	CD164	Q04900	197 aa		9.98	□□□□□ -0.81
NCAPD3-213	ENST00000534532	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.97	□□□□□ -0.81
NCAPD3-213	ENST00000534532	CENPE	Q02224	2701 aa		9.97	□□□□□ -0.81
NCAPD3-213	ENST00000534532	PRR26	Q8N8Z3	221 aa		9.96	□□□□□ -0.82
NCAPD3-213	ENST00000534532		A0A1W2PNM2	257 aa		9.95	□□□□□ -0.82
NCAPD3-213	ENST00000534532	TEP1	Q99973	2627 aa	Known RBP	9.94	□□□□□ -0.82
NCAPD3-213	ENST00000534532	UQCR11	O14957	56 aa		9.94	□□□□□ -0.82
NCAPD3-213	ENST00000534532	FAM229B	Q4G0N7	80 aa		9.93	□□□□□ -0.82
NCAPD3-213	ENST00000534532	RPS28	P62857	69 aa	Known RBP	9.92	□□□□□ -0.82
NCAPD3-213	ENST00000534532	IGLV5-48	A0A075B6I7	105 aa		9.9	□□□□□ -0.82
NCAPD3-213	ENST00000534532	PLAC8	Q9NZF1	115 aa		9.89	□□□□□ -0.83
NCAPD3-213	ENST00000534532	DNAH12	Q6ZR08	3092 aa		9.87	□□□□□ -0.83
NCAPD3-213	ENST00000534532	LCE6A	A0A183	80 aa		9.87	□□□□□ -0.83
NCAPD3-213	ENST00000534532		M0R2T5	61 aa		9.85	□□□□□ -0.83
NCAPD3-213	ENST00000534532	PRO0628	Q9UI54	55 aa		9.85	□□□□□ -0.83
NCAPD3-213	ENST00000534532	CYP4F30P	Q9H0H9	118 aa		9.84	□□□□□ -0.83
NCAPD3-213	ENST00000534532	LINC01554	Q52M75	96 aa		9.84	□□□□□ -0.83
NCAPD3-213	ENST00000534532		Q8N1X5	172 aa		9.83	□□□□□ -0.84
NCAPD3-213	ENST00000534532	CR1	P17927	2039 aa		9.83	□□□□□ -0.84
NCAPD3-213	ENST00000534532	COL6A5	A8TX70	2615 aa		9.82	□□□□□ -0.84
NCAPD3-213	ENST00000534532	TEX15	Q9BXT5	2789 aa		9.82	□□□□□ -0.84
NCAPD3-213	ENST00000534532	CRIPT	Q9P021	101 aa		9.81	□□□□□ -0.84
NCAPD3-213	ENST00000534532	FAM104A	Q969W3	186 aa		9.8	□□□□□ -0.84
NCAPD3-213	ENST00000534532	KLKP1	Q107X0	134 aa		9.8	□□□□□ -0.84
NCAPD3-213	ENST00000534532	CEP350	Q5VT06	3117 aa		9.8	□□□□□ -0.84
NCAPD3-213	ENST00000534532	MIR22HG	Q0VDD5	57 aa		9.79	□□□□□ -0.84
NCAPD3-213	ENST00000534532	BAHCC1	Q9P281	2608 aa		9.79	□□□□□ -0.84
NCAPD3-213	ENST00000534532		A8MUN3	132 aa		9.79	□□□□□ -0.84
NCAPD3-213	ENST00000534532	C4orf26	Q17RF5	130 aa		9.76	□□□□□ -0.85
NCAPD3-213	ENST00000534532	SPINT4	Q6UDR6	99 aa		9.76	□□□□□ -0.85
NCAPD3-213	ENST00000534532	CHD7	Q9P2D1	2997 aa		9.75	□□□□□ -0.85
NCAPD3-213	ENST00000534532		Q5VSD8	79 aa		9.75	□□□□□ -0.85
NCAPD3-213	ENST00000534532	ZNF292	O60281	2723 aa		9.75	□□□□□ -0.85
NCAPD3-213	ENST00000534532	SPANXA2-OT1	Q8N9U9	137 aa		9.71	□□□□□ -0.85
NCAPD3-213	ENST00000534532	AKAP13	Q12802	2813 aa		9.71	□□□□□ -0.86
NCAPD3-213	ENST00000534532	UNC79	Q9P2D8	2635 aa		9.7	□□□□□ -0.86
NCAPD3-213	ENST00000534532		A0A0D9SG42	100 aa		9.69	□□□□□ -0.86
NCAPD3-213	ENST00000534532	SEC61B	P60468	96 aa	Known RBP	9.69	□□□□□ -0.86
NCAPD3-213	ENST00000534532	KRTAP1-5	Q9BYS1	174 aa		9.68	□□□□□ -0.86
NCAPD3-213	ENST00000534532	SPRR1A	P35321	89 aa		9.67	□□□□□ -0.86
NCAPD3-213	ENST00000534532	CHD6	Q8TD26	2715 aa		9.65	□□□□□ -0.87
NCAPD3-213	ENST00000534532	KRTAP10-1	P60331	282 aa		9.64	□□□□□ -0.87
NCAPD3-213	ENST00000534532	ZCCHC13	Q8WW36	166 aa	Known RBP	9.64	□□□□□ -0.87
NCAPD3-213	ENST00000534532	UTRN	P46939	3433 aa		9.64	□□□□□ -0.87
NCAPD3-213	ENST00000534532	CHD9	Q3L8U1	2897 aa		9.63	□□□□□ -0.87
NCAPD3-213	ENST00000534532		H7BZZ5	65 aa		9.63	□□□□□ -0.87
NCAPD3-213	ENST00000534532	CSAG1	Q6PB30	78 aa		9.61	□□□□□ -0.87
NCAPD3-213	ENST00000534532	CAMK2N1	Q7Z7J9	78 aa		9.61	□□□□□ -0.87
NCAPD3-213	ENST00000534532	SPRR1B	P22528	89 aa		9.61	□□□□□ -0.87
NCAPD3-213	ENST00000534532	CDC42SE1	Q9NRR8	79 aa		9.6	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms