RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
UBXN1-217ENST00000534176 Q6ZVH6 145 aa9.04□□□□□ -0.96
UBXN1-217ENST00000534176 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
UBXN1-217ENST00000534176 SMCR5Q8TEV8 140 aa9.04□□□□□ -0.96
UBXN1-217ENST00000534176 PPDPFQ9H3Y8 114 aa9.04□□□□□ -0.96
UBXN1-217ENST00000534176 TSPAN13O95857 204 aa9.03□□□□□ -0.96
UBXN1-217ENST00000534176 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
UBXN1-217ENST00000534176 LRP2P98164 4655 aa9.03□□□□□ -0.96
UBXN1-217ENST00000534176 ZNF73O43830 326 aaPredicted RBP9.02□□□□□ -0.97
UBXN1-217ENST00000534176 S100A2P29034 98 aa9.02□□□□□ -0.97
UBXN1-217ENST00000534176 LINC00483Q53H64 154 aa9.02□□□□□ -0.97
UBXN1-217ENST00000534176 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
UBXN1-217ENST00000534176 LITAFQ99732 161 aa9.02□□□□□ -0.97
UBXN1-217ENST00000534176 SPANXDQ9BXN6 97 aa9.02□□□□□ -0.97
UBXN1-217ENST00000534176 IFITM1P13164 125 aa9.01□□□□□ -0.97
UBXN1-217ENST00000534176 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
UBXN1-217ENST00000534176 NPC2P61916 151 aa9□□□□□ -0.97
UBXN1-217ENST00000534176 S100A6P06703 90 aa8.99□□□□□ -0.97
UBXN1-217ENST00000534176 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
UBXN1-217ENST00000534176 SSBP3-AS1Q7Z2R9 100 aa8.97□□□□□ -0.97
UBXN1-217ENST00000534176 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
UBXN1-217ENST00000534176 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
UBXN1-217ENST00000534176 HSBP1L1C9JCN9 74 aa8.96□□□□□ -0.98
UBXN1-217ENST00000534176 SPINK1P00995 79 aa8.96□□□□□ -0.98
UBXN1-217ENST00000534176 GAGE2AQ6NT46 116 aa8.96□□□□□ -0.98
UBXN1-217ENST00000534176 SLC25A34Q6PIV7 304 aa8.96□□□□□ -0.98
UBXN1-217ENST00000534176 Q9BRP9 147 aa8.96□□□□□ -0.98
UBXN1-217ENST00000534176 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
UBXN1-217ENST00000534176 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
UBXN1-217ENST00000534176 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
UBXN1-217ENST00000534176 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
UBXN1-217ENST00000534176 TRBV7-6A0A0J9YX20 115 aa8.93□□□□□ -0.98
UBXN1-217ENST00000534176 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
UBXN1-217ENST00000534176 TTTY13Q9BZ97 58 aa8.93□□□□□ -0.98
UBXN1-217ENST00000534176 FP248Q71RG6 208 aaPredicted RBP8.92□□□□□ -0.98
UBXN1-217ENST00000534176 ATOH7Q8N100 152 aa8.92□□□□□ -0.98
UBXN1-217ENST00000534176 Q8NBF4 154 aa8.92□□□□□ -0.98
UBXN1-217ENST00000534176 ERC2-IT1O76042 136 aa8.91□□□□□ -0.98
UBXN1-217ENST00000534176 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
UBXN1-217ENST00000534176 TRAV13-2A0A0B4J235 113 aa8.9□□□□□ -0.98
UBXN1-217ENST00000534176 ELOF1P60002 83 aaKnown RBP8.9□□□□□ -0.98
UBXN1-217ENST00000534176 A4D1N5 150 aa8.89□□□□□ -0.99
UBXN1-217ENST00000534176 COX7BP24311 80 aa8.89□□□□□ -0.99
UBXN1-217ENST00000534176 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
UBXN1-217ENST00000534176 A0A1B0GWB2 263 aa8.88□□□□□ -0.99
UBXN1-217ENST00000534176 MOBPQ13875 183 aa8.88□□□□□ -0.99
UBXN1-217ENST00000534176 PCP2Q8IVA1 136 aa8.88□□□□□ -0.99
UBXN1-217ENST00000534176 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
UBXN1-217ENST00000534176 SPRR1BP22528 89 aa8.87□□□□□ -0.99
UBXN1-217ENST00000534176 C6orf99Q4VX62 202 aa8.87□□□□□ -0.99
UBXN1-217ENST00000534176 NHP2Q9NX24 153 aaKnown RBP8.87□□□□□ -0.99
UBXN1-217ENST00000534176 A6NDN8 102 aa8.86□□□□□ -0.99
UBXN1-217ENST00000534176 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
UBXN1-217ENST00000534176 LPAP08519 4548 aa8.85□□□□□ -0.99
UBXN1-217ENST00000534176 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
UBXN1-217ENST00000534176 RETNLBQ9BQ08 111 aa8.85□□□□□ -0.99
UBXN1-217ENST00000534176 LAMTOR3Q9UHA4 124 aa8.85□□□□□ -0.99
UBXN1-217ENST00000534176 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
UBXN1-217ENST00000534176 SLC25A20O43772 301 aa8.83□□□□□ -1
UBXN1-217ENST00000534176 A0A0U1RQV1 116 aa8.82□□□□□ -1
UBXN1-217ENST00000534176 SCGB1D1O95968 90 aa8.82□□□□□ -1
UBXN1-217ENST00000534176 VAMP3Q15836 100 aa8.82□□□□□ -1
UBXN1-217ENST00000534176 TEX49A0A1B0GTD5 131 aa8.81□□□□□ -1
UBXN1-217ENST00000534176 TAL2Q16559 108 aa8.81□□□□□ -1
UBXN1-217ENST00000534176 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
UBXN1-217ENST00000534176 RNF213Q63HN8 5207 aa8.81□□□□□ -1
UBXN1-217ENST00000534176 LIMD2Q9BT23 127 aa8.79□□□□□ -1
UBXN1-217ENST00000534176 Q8N377 158 aa8.78□□□□□ -1
UBXN1-217ENST00000534176 DLEU1O43261 78 aa8.77□□□□□ -1.01
UBXN1-217ENST00000534176 COX8AP10176 69 aa8.76□□□□□ -1.01
UBXN1-217ENST00000534176 CD164Q04900 197 aa8.76□□□□□ -1.01
UBXN1-217ENST00000534176 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
UBXN1-217ENST00000534176 IGLV5-48A0A075B6I7 105 aa8.75□□□□□ -1.01
UBXN1-217ENST00000534176 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
UBXN1-217ENST00000534176 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
UBXN1-217ENST00000534176 DEFB105AQ8NG35 78 aa8.73□□□□□ -1.01
UBXN1-217ENST00000534176 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
UBXN1-217ENST00000534176 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.02
UBXN1-217ENST00000534176 SNCGO76070 127 aa8.7□□□□□ -1.02
UBXN1-217ENST00000534176 HIGD1BQ9P298 99 aa8.7□□□□□ -1.02
UBXN1-217ENST00000534176 H7C2G1 150 aa8.69□□□□□ -1.02
UBXN1-217ENST00000534176 Q1RN00 199 aa8.69□□□□□ -1.02
UBXN1-217ENST00000534176 VAMP8Q9BV40 100 aa8.69□□□□□ -1.02
UBXN1-217ENST00000534176 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
UBXN1-217ENST00000534176 F8WEM9 126 aa8.68□□□□□ -1.02
UBXN1-217ENST00000534176 Q5XG85 94 aa8.68□□□□□ -1.02
UBXN1-217ENST00000534176 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
UBXN1-217ENST00000534176 PPDPFLQ8WWR9 84 aa8.68□□□□□ -1.02
UBXN1-217ENST00000534176 LINC01547P58512 204 aaPredicted RBP8.67□□□□□ -1.02
UBXN1-217ENST00000534176 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
UBXN1-217ENST00000534176 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
UBXN1-217ENST00000534176 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
UBXN1-217ENST00000534176 A6NJY4 79 aa8.65□□□□□ -1.02
UBXN1-217ENST00000534176 SEC61BP60468 96 aaKnown RBP8.65□□□□□ -1.02
UBXN1-217ENST00000534176 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
UBXN1-217ENST00000534176 PAM16Q9Y3D7 125 aa8.65□□□□□ -1.02
UBXN1-217ENST00000534176 RAB37Q96AX2 223 aa8.64□□□□□ -1.03
UBXN1-217ENST00000534176 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
UBXN1-217ENST00000534176 GHRHP01286 108 aa8.63□□□□□ -1.03
UBXN1-217ENST00000534176 OCIAD2Q56VL3 154 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms