RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 SPANXB1Q9NS25 103 aaPredicted RBP5.35□□□□□ -1.55
PACS1-214ENST00000533811 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 TMEM238LA0A1B0GVL6 79 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 A6NJY4 79 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 UBE2AP49459 152 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 C2orf91Q6ZV80 131 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 Q8IZM0 81 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.55
PACS1-214ENST00000533811 A6NDN8 102 aa5.33□□□□□ -1.56
PACS1-214ENST00000533811 TP73-AS1Q9UF72 201 aa5.33□□□□□ -1.56
PACS1-214ENST00000533811 IFITM1P13164 125 aa5.32□□□□□ -1.56
PACS1-214ENST00000533811 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
PACS1-214ENST00000533811 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
PACS1-214ENST00000533811 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
PACS1-214ENST00000533811 TSPEAR-AS2P59090 65 aa5.31□□□□□ -1.56
PACS1-214ENST00000533811 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
PACS1-214ENST00000533811 HIST1H4GQ99525 98 aa5.31□□□□□ -1.56
PACS1-214ENST00000533811 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
PACS1-214ENST00000533811 SPANXCQ9NY87 97 aa5.31□□□□□ -1.56
PACS1-214ENST00000533811 RPL24P83731 157 aaKnown RBP5.3□□□□□ -1.56
PACS1-214ENST00000533811 BVES-AS1Q5T3Y7 98 aa5.3□□□□□ -1.56
PACS1-214ENST00000533811 CEND1Q8N111 149 aa5.3□□□□□ -1.56
PACS1-214ENST00000533811 ZNF625Q96I27 306 aaPredicted RBP5.3□□□□□ -1.56
PACS1-214ENST00000533811 SNHG12Q9BXW3 62 aa5.3□□□□□ -1.56
PACS1-214ENST00000533811 COX17Q14061 63 aa5.29□□□□□ -1.56
PACS1-214ENST00000533811 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
PACS1-214ENST00000533811 TTTY13Q9BZ97 58 aa5.29□□□□□ -1.56
PACS1-214ENST00000533811 HINT1P49773 126 aaPredicted RBP5.28□□□□□ -1.56
PACS1-214ENST00000533811 PRLHP81277 87 aa5.28□□□□□ -1.56
PACS1-214ENST00000533811 KRTAP13-1Q8IUC0 172 aa5.28□□□□□ -1.56
PACS1-214ENST00000533811 C3orf22Q8N5N4 141 aa5.28□□□□□ -1.56
PACS1-214ENST00000533811 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 ASB16-AS1Q495Z4 193 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 MEIG1Q5JSS6 88 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 FAM19A1Q7Z5A9 133 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 FSIP2Q5CZC0 6907 aa5.27□□□□□ -1.57
PACS1-214ENST00000533811 A0A1B0GWB2 263 aa5.26□□□□□ -1.57
PACS1-214ENST00000533811 BATFQ16520 125 aa5.26□□□□□ -1.57
PACS1-214ENST00000533811 LITAFQ99732 161 aa5.26□□□□□ -1.57
PACS1-214ENST00000533811 PFN2P35080 140 aa5.25□□□□□ -1.57
PACS1-214ENST00000533811 LINC00158P58513 81 aa5.25□□□□□ -1.57
PACS1-214ENST00000533811 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
PACS1-214ENST00000533811 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
PACS1-214ENST00000533811 C4orf48Q5BLP8 95 aa5.25□□□□□ -1.57
PACS1-214ENST00000533811 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
PACS1-214ENST00000533811 ERG28Q9UKR5 140 aa5.25□□□□□ -1.57
PACS1-214ENST00000533811 A0A0B4J2C4 111 aa5.24□□□□□ -1.57
PACS1-214ENST00000533811 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
PACS1-214ENST00000533811 FXYD2P54710 66 aa5.24□□□□□ -1.57
PACS1-214ENST00000533811 LYRM7Q5U5X0 104 aa5.24□□□□□ -1.57
PACS1-214ENST00000533811 SPAG11AQ6PDA7 123 aa5.24□□□□□ -1.57
PACS1-214ENST00000533811 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
PACS1-214ENST00000533811 LOC107984156A0A0G2JMH3 177 aa5.23□□□□□ -1.57
PACS1-214ENST00000533811 ARL17AQ8IVW1 177 aa5.23□□□□□ -1.57
PACS1-214ENST00000533811 NHP2Q9NX24 153 aaKnown RBP5.23□□□□□ -1.57
PACS1-214ENST00000533811 A0A0U1RRA0 63 aa5.22□□□□□ -1.57
PACS1-214ENST00000533811 LINC00308Q8TCZ7 52 aa5.22□□□□□ -1.57
PACS1-214ENST00000533811 HIGD2AQ9BW72 106 aa5.22□□□□□ -1.57
PACS1-214ENST00000533811 A4D1N5 150 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 C9orf118A6NHY6 69 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 NDUFC2O95298 119 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 MUSTN1Q8IVN3 82 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 DAND5Q8N907 189 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 TMEM126AQ9H061 195 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
PACS1-214ENST00000533811 TRAV13-2A0A0B4J235 113 aa5.2□□□□□ -1.58
PACS1-214ENST00000533811 TAX1BP3O14907 124 aa5.2□□□□□ -1.58
PACS1-214ENST00000533811 ADAMTSL4-AS1Q5T5F5 129 aa5.2□□□□□ -1.58
PACS1-214ENST00000533811 MIR7-3HGQ8N6C7 128 aa5.2□□□□□ -1.58
PACS1-214ENST00000533811 Q8NBF4 154 aa5.2□□□□□ -1.58
PACS1-214ENST00000533811 SND1-IT1Q9HBX3 110 aa5.2□□□□□ -1.58
PACS1-214ENST00000533811 CBY1Q9Y3M2 126 aa5.19□□□□□ -1.58
PACS1-214ENST00000533811 M0R378 163 aa5.18□□□□□ -1.58
PACS1-214ENST00000533811 CFC1BP0CG36 223 aa5.18□□□□□ -1.58
PACS1-214ENST00000533811 CFC1P0CG37 223 aa5.18□□□□□ -1.58
PACS1-214ENST00000533811 FABP2P12104 132 aa5.18□□□□□ -1.58
PACS1-214ENST00000533811 XP32Q5T750 250 aa5.18□□□□□ -1.58
PACS1-214ENST00000533811 SPRR4Q96PI1 79 aa5.18□□□□□ -1.58
PACS1-214ENST00000533811 COX6CP09669 75 aa5.17□□□□□ -1.58
PACS1-214ENST00000533811 VPREB1P12018 145 aa5.17□□□□□ -1.58
PACS1-214ENST00000533811 GTF2H5Q6ZYL4 71 aa5.17□□□□□ -1.58
PACS1-214ENST00000533811 TRBV20-1A0A075B6N2 111 aa5.16□□□□□ -1.58
PACS1-214ENST00000533811 TRBV10-2A0A0K0K1G8 114 aa5.16□□□□□ -1.58
PACS1-214ENST00000533811 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
PACS1-214ENST00000533811 ZNF706Q9Y5V0 76 aaPredicted RBP5.16□□□□□ -1.58
PACS1-214ENST00000533811 A0A1B0GV90 55 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 H3BUT2 72 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 K7ERJ3 54 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 SPINK1P00995 79 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 MT1HP80294 61 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 VAMP3Q15836 100 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 Q1RN00 199 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.59
PACS1-214ENST00000533811 NPC2P61916 151 aa5.14□□□□□ -1.59
PACS1-214ENST00000533811 K7EP34 96 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms