RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 A4D1N5 150 aa6.4□□□□□ -1.38
SVIP-205ENST00000533774 LINC01546A6NGU7 62 aa6.4□□□□□ -1.38
SVIP-205ENST00000533774 PET117Q6UWS5 81 aa6.4□□□□□ -1.38
SVIP-205ENST00000533774 Q6Q795 121 aa6.39□□□□□ -1.39
SVIP-205ENST00000533774 ST20-AS1Q8NBB2 130 aa6.39□□□□□ -1.39
SVIP-205ENST00000533774 TRAV9-1A0A075B6T8 112 aa6.38□□□□□ -1.39
SVIP-205ENST00000533774 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
SVIP-205ENST00000533774 Q6ZRX8 168 aa6.38□□□□□ -1.39
SVIP-205ENST00000533774 MT2AP02795 61 aa6.37□□□□□ -1.39
SVIP-205ENST00000533774 LIMD2Q9BT23 127 aa6.37□□□□□ -1.39
SVIP-205ENST00000533774 C11orf86A6NJI1 115 aa6.36□□□□□ -1.39
SVIP-205ENST00000533774 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
SVIP-205ENST00000533774 PEA15Q15121 130 aa6.35□□□□□ -1.39
SVIP-205ENST00000533774 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
SVIP-205ENST00000533774 NDUFA6P56556 154 aa6.34□□□□□ -1.39
SVIP-205ENST00000533774 A0A096LNJ9 63 aa6.33□□□□□ -1.4
SVIP-205ENST00000533774 LINC01549A6NIU2 74 aa6.33□□□□□ -1.4
SVIP-205ENST00000533774 MT1FP04733 61 aa6.33□□□□□ -1.4
SVIP-205ENST00000533774 C1orf195Q5TG92 126 aa6.33□□□□□ -1.4
SVIP-205ENST00000533774 SFTA2Q6UW10 78 aa6.33□□□□□ -1.4
SVIP-205ENST00000533774 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
SVIP-205ENST00000533774 DDTP30046 118 aa6.32□□□□□ -1.4
SVIP-205ENST00000533774 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
SVIP-205ENST00000533774 PCP4L1A6NKN8 68 aa6.31□□□□□ -1.4
SVIP-205ENST00000533774 H7C2G1 150 aa6.31□□□□□ -1.4
SVIP-205ENST00000533774 LINC00587B1AMM8 73 aa6.3□□□□□ -1.4
SVIP-205ENST00000533774 SPRR1BP22528 89 aa6.29□□□□□ -1.4
SVIP-205ENST00000533774 KRTAP6-3Q3LI67 103 aa6.29□□□□□ -1.4
SVIP-205ENST00000533774 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
SVIP-205ENST00000533774 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
SVIP-205ENST00000533774 MT-ND4LP03901 98 aa6.28□□□□□ -1.4
SVIP-205ENST00000533774 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
SVIP-205ENST00000533774 FA2HQ7L5A8 372 aa6.27□□□□□ -1.41
SVIP-205ENST00000533774 BAGE3Q86Y29 109 aa6.27□□□□□ -1.41
SVIP-205ENST00000533774 URB1-AS1Q96HZ7 61 aa6.27□□□□□ -1.41
SVIP-205ENST00000533774 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 LINC00614P0C842 121 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 S100PP25815 95 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 CD164Q04900 197 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 Q5XG85 94 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 C12orf57Q99622 126 aa6.26□□□□□ -1.41
SVIP-205ENST00000533774 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
SVIP-205ENST00000533774 SMIM6P0DI80 62 aa6.25□□□□□ -1.41
SVIP-205ENST00000533774 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
SVIP-205ENST00000533774 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
SVIP-205ENST00000533774 SMCO4Q9NRQ5 59 aa6.25□□□□□ -1.41
SVIP-205ENST00000533774 SMIM29Q86T20 159 aa6.24□□□□□ -1.41
SVIP-205ENST00000533774 TRAV23DV6A0A075B6W5 121 aa6.23□□□□□ -1.41
SVIP-205ENST00000533774 C5orf52A6NGY3 159 aa6.23□□□□□ -1.41
SVIP-205ENST00000533774 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
SVIP-205ENST00000533774 IFITM2Q01629 132 aa6.23□□□□□ -1.41
SVIP-205ENST00000533774 HERV-K104P63124 156 aa6.22□□□□□ -1.41
SVIP-205ENST00000533774 SPANXB1Q9NS25 103 aaPredicted RBP6.22□□□□□ -1.41
SVIP-205ENST00000533774 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
SVIP-205ENST00000533774 Q1RN00 199 aa6.21□□□□□ -1.42
SVIP-205ENST00000533774 LAMTOR3Q9UHA4 124 aa6.21□□□□□ -1.42
SVIP-205ENST00000533774 C20orf202A1L168 122 aa6.2□□□□□ -1.42
SVIP-205ENST00000533774 HBDP02042 147 aa6.2□□□□□ -1.42
SVIP-205ENST00000533774 S100A7L2Q5SY68 101 aa6.2□□□□□ -1.42
SVIP-205ENST00000533774 TSPEAR-AS2P59090 65 aa6.19□□□□□ -1.42
SVIP-205ENST00000533774 SLC25A34Q6PIV7 304 aa6.19□□□□□ -1.42
SVIP-205ENST00000533774 PRO1933Q9H354 126 aa6.19□□□□□ -1.42
SVIP-205ENST00000533774 RPS10P5Q9NQ39 176 aa6.19□□□□□ -1.42
SVIP-205ENST00000533774 SOSTDC1Q6X4U4 206 aa6.18□□□□□ -1.42
SVIP-205ENST00000533774 MAP1LC3CQ9BXW4 147 aa6.18□□□□□ -1.42
SVIP-205ENST00000533774 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
SVIP-205ENST00000533774 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
SVIP-205ENST00000533774 Q75L30 129 aa6.17□□□□□ -1.42
SVIP-205ENST00000533774 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
SVIP-205ENST00000533774 NEBP20929 6669 aa6.16□□□□□ -1.42
SVIP-205ENST00000533774 NDUFC2O95298 119 aa6.16□□□□□ -1.42
SVIP-205ENST00000533774 FABP9Q0Z7S8 132 aa6.16□□□□□ -1.42
SVIP-205ENST00000533774 C18orf32Q8TCD1 76 aa6.16□□□□□ -1.42
SVIP-205ENST00000533774 DEFB105AQ8NG35 78 aa6.15□□□□□ -1.42
SVIP-205ENST00000533774 LINC00846Q9NV44 126 aa6.15□□□□□ -1.42
SVIP-205ENST00000533774 AKR1D1P51857 326 aa6.14□□□□□ -1.43
SVIP-205ENST00000533774 TRAV12-1A0A0B4J245 112 aa6.13□□□□□ -1.43
SVIP-205ENST00000533774 NPC2P61916 151 aa6.13□□□□□ -1.43
SVIP-205ENST00000533774 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
SVIP-205ENST00000533774 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
SVIP-205ENST00000533774 TAL2Q16559 108 aa6.12□□□□□ -1.43
SVIP-205ENST00000533774 A0A1B0GV90 55 aa6.11□□□□□ -1.43
SVIP-205ENST00000533774 MIEN1Q9BRT3 115 aa6.11□□□□□ -1.43
SVIP-205ENST00000533774 MUC12Q9UKN1 5478 aa6.11□□□□□ -1.43
SVIP-205ENST00000533774 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
SVIP-205ENST00000533774 HINT1P49773 126 aaPredicted RBP6.1□□□□□ -1.43
SVIP-205ENST00000533774 ADAMTSL4-AS1Q5T5F5 129 aa6.1□□□□□ -1.43
SVIP-205ENST00000533774 PCP2Q8IVA1 136 aa6.1□□□□□ -1.43
SVIP-205ENST00000533774 SEC11CQ9BY50 192 aa6.1□□□□□ -1.43
SVIP-205ENST00000533774 LEPROTO15243 131 aa6.09□□□□□ -1.43
SVIP-205ENST00000533774 C10orf91Q5T1B1 145 aa6.09□□□□□ -1.43
SVIP-205ENST00000533774 IFI27L1Q96BM0 104 aa6.09□□□□□ -1.43
SVIP-205ENST00000533774 ELOF1P60002 83 aaKnown RBP6.08□□□□□ -1.44
SVIP-205ENST00000533774 TCL1BO95988 128 aa6.07□□□□□ -1.44
SVIP-205ENST00000533774 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
SVIP-205ENST00000533774 COX19Q49B96 90 aa6.07□□□□□ -1.44
SVIP-205ENST00000533774 COMMD7Q86VX2 200 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms