RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 C14orf177Q52M58 125 aa8.42□□□□□ -1.06
BDNF-218ENST00000533246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
BDNF-218ENST00000533246 Q6ZVQ6 151 aa8.41□□□□□ -1.06
BDNF-218ENST00000533246 A0A096LNT2 108 aa8.4□□□□□ -1.06
BDNF-218ENST00000533246 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
BDNF-218ENST00000533246 ZNF575Q86XF7 245 aa8.4□□□□□ -1.06
BDNF-218ENST00000533246 ASPMQ8IZT6 3477 aa8.4□□□□□ -1.06
BDNF-218ENST00000533246 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.07
BDNF-218ENST00000533246 IGLV9-49A0A0B4J1Y8 123 aa8.39□□□□□ -1.07
BDNF-218ENST00000533246 Q8N9L7 120 aa8.39□□□□□ -1.07
BDNF-218ENST00000533246 LITAFQ99732 161 aa8.38□□□□□ -1.07
BDNF-218ENST00000533246 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
BDNF-218ENST00000533246 LY6G6CO95867 125 aa8.38□□□□□ -1.07
BDNF-218ENST00000533246 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
BDNF-218ENST00000533246 DHRS4-AS1Q9P1J3 65 aa8.38□□□□□ -1.07
BDNF-218ENST00000533246 BCE1O60756 84 aa8.37□□□□□ -1.07
BDNF-218ENST00000533246 C1orf137Q5JT78 98 aa8.37□□□□□ -1.07
BDNF-218ENST00000533246 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
BDNF-218ENST00000533246 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
BDNF-218ENST00000533246 GIG44P09565 113 aaPredicted RBP8.35□□□□□ -1.07
BDNF-218ENST00000533246 PRLHP81277 87 aa8.35□□□□□ -1.07
BDNF-218ENST00000533246 LCA10Q71F78 164 aa8.34□□□□□ -1.07
BDNF-218ENST00000533246 KRTAP24-1Q3LI83 254 aa8.34□□□□□ -1.07
BDNF-218ENST00000533246 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
BDNF-218ENST00000533246 CASC2Q6XLA1 102 aa8.33□□□□□ -1.08
BDNF-218ENST00000533246 NF1P21359 2839 aa8.33□□□□□ -1.08
BDNF-218ENST00000533246 Q8NAQ8 132 aa8.32□□□□□ -1.08
BDNF-218ENST00000533246 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
BDNF-218ENST00000533246 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
BDNF-218ENST00000533246 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
BDNF-218ENST00000533246 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
BDNF-218ENST00000533246 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
BDNF-218ENST00000533246 A0A087WSZ3 146 aa8.31□□□□□ -1.08
BDNF-218ENST00000533246 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
BDNF-218ENST00000533246 CXCL6P80162 114 aa8.3□□□□□ -1.08
BDNF-218ENST00000533246 C1orf64Q8NEQ6 169 aa8.3□□□□□ -1.08
BDNF-218ENST00000533246 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
BDNF-218ENST00000533246 ZNF706Q9Y5V0 76 aaPredicted RBP8.3□□□□□ -1.08
BDNF-218ENST00000533246 RELNP78509 3460 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 C7orf33Q8WU49 177 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 C19orf73Q9NVV2 129 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 LINC00208Q96KT6 92 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
BDNF-218ENST00000533246 KRTAP10-3P60369 221 aa8.27□□□□□ -1.08
BDNF-218ENST00000533246 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
BDNF-218ENST00000533246 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
BDNF-218ENST00000533246 HIVEP1P15822 2718 aa8.26□□□□□ -1.09
BDNF-218ENST00000533246 SPATA3Q8NHX4 192 aa8.26□□□□□ -1.09
BDNF-218ENST00000533246 C8orf87E5RJ46 101 aa8.26□□□□□ -1.09
BDNF-218ENST00000533246 LAMA5O15230 3695 aa8.25□□□□□ -1.09
BDNF-218ENST00000533246 LINC00167Q96N53 147 aa8.25□□□□□ -1.09
BDNF-218ENST00000533246 FBN2P35556 2912 aa8.25□□□□□ -1.09
BDNF-218ENST00000533246 LINC01556Q5JQF7 62 aa8.25□□□□□ -1.09
BDNF-218ENST00000533246 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
BDNF-218ENST00000533246 DCHS2Q6V1P9 2916 aa8.24□□□□□ -1.09
BDNF-218ENST00000533246 Q9BRP9 147 aa8.23□□□□□ -1.09
BDNF-218ENST00000533246 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
BDNF-218ENST00000533246 Q6ZRP5 223 aa8.21□□□□□ -1.1
BDNF-218ENST00000533246 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
BDNF-218ENST00000533246 CIRBP-AS1Q8TBR5 109 aa8.2□□□□□ -1.1
BDNF-218ENST00000533246 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
BDNF-218ENST00000533246 SMIM29Q86T20 159 aa8.2□□□□□ -1.1
BDNF-218ENST00000533246 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
BDNF-218ENST00000533246 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
BDNF-218ENST00000533246 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
BDNF-218ENST00000533246 KRTAP1-1Q07627 177 aa8.18□□□□□ -1.1
BDNF-218ENST00000533246 ZFHX4Q86UP3 3567 aa8.17□□□□□ -1.1
BDNF-218ENST00000533246 NUPR2A6NF83 97 aa8.17□□□□□ -1.1
BDNF-218ENST00000533246 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
BDNF-218ENST00000533246 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
BDNF-218ENST00000533246 Q1T7F1 81 aa8.17□□□□□ -1.1
BDNF-218ENST00000533246 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
BDNF-218ENST00000533246 Q6ZQT0 140 aa8.16□□□□□ -1.1
BDNF-218ENST00000533246 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
BDNF-218ENST00000533246 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
BDNF-218ENST00000533246 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.11
BDNF-218ENST00000533246 ELOF1P60002 83 aaKnown RBP8.14□□□□□ -1.11
BDNF-218ENST00000533246 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
BDNF-218ENST00000533246 PRAC1Q96KF2 57 aa8.14□□□□□ -1.11
BDNF-218ENST00000533246 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
BDNF-218ENST00000533246 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
BDNF-218ENST00000533246 DMDP11532 3685 aa8.13□□□□□ -1.11
BDNF-218ENST00000533246 KMT2BQ9UMN6 2715 aaPredicted RBP8.13□□□□□ -1.11
BDNF-218ENST00000533246 TRBV7-4A0A0J9YYF1 115 aa8.13□□□□□ -1.11
BDNF-218ENST00000533246 A0A0G2JQZ4 141 aa8.12□□□□□ -1.11
BDNF-218ENST00000533246 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
BDNF-218ENST00000533246 NIPBLQ6KC79 2804 aaeCLIP8.12□□□□□ -1.11
BDNF-218ENST00000533246 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
BDNF-218ENST00000533246 CR1P17927 2039 aa8.12□□□□□ -1.11
BDNF-218ENST00000533246 APCP25054 2843 aa8.12□□□□□ -1.11
BDNF-218ENST00000533246 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
BDNF-218ENST00000533246 H3BNG1 76 aa8.11□□□□□ -1.11
BDNF-218ENST00000533246 HRNRQ86YZ3 2850 aaPredicted RBP8.1□□□□□ -1.11
BDNF-218ENST00000533246 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
BDNF-218ENST00000533246 Q6ZRX8 168 aa8.09□□□□□ -1.11
BDNF-218ENST00000533246 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
BDNF-218ENST00000533246 PRR34Q9NV39 138 aa8.09□□□□□ -1.11
BDNF-218ENST00000533246 LOC101927531A0A1B0GV80 90 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms