RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 RNF17Q9BXT8 1623 aaKnown RBP0.13□□□□□ -2.39
PKHD1L1-203ENST00000533183 C10orf142B7Z368 130 aa0.13□□□□□ -2.39
PKHD1L1-203ENST00000533183 UBA52P62987 128 aaKnown RBP0.13□□□□□ -2.39
PKHD1L1-203ENST00000533183 DEFB109BQ30KR1 87 aa0.13□□□□□ -2.39
PKHD1L1-203ENST00000533183 Q5VSD8 79 aa0.13□□□□□ -2.39
PKHD1L1-203ENST00000533183 DNAH10Q8IVF4 4471 aa0.13□□□□□ -2.39
PKHD1L1-203ENST00000533183 TNRC6CQ9HCJ0 1690 aaKnown RBP0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 TRBV6-1A0A0K0K1D8 114 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 COX6CP09669 75 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 TRAPPC2P0DI81 140 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 TRAPPC2BP0DI82 140 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 SNCAP37840 140 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 HSD52Q0P140 79 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 FAM223AQ8IWN6 122 aa0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 MARF1Q9Y4F3 1742 aaKnown RBP0.12□□□□□ -2.39
PKHD1L1-203ENST00000533183 GAPVD1Q14C86 1478 aa0.11□□□□□ -2.39
PKHD1L1-203ENST00000533183 C1orf167Q5SNV9 1468 aa0.11□□□□□ -2.39
PKHD1L1-203ENST00000533183 PRO1854Q9UHT4 67 aa0.11□□□□□ -2.39
PKHD1L1-203ENST00000533183 KNL1Q8NG31 2342 aa0.11□□□□□ -2.39
PKHD1L1-203ENST00000533183 CROCC2H7BZ55 1655 aa0.11□□□□□ -2.39
PKHD1L1-203ENST00000533183 TNXBP22105 4242 aa0.11□□□□□ -2.39
PKHD1L1-203ENST00000533183 RGPD1P0DJD0 1748 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 USP32Q8NFA0 1604 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 FXYD6-FXYD2A0A087WZ82 144 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 S100PP25815 95 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 KRTDAPP60985 99 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 UBE2D3P61077 147 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 UBE2D2P62837 147 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 SFTA2Q6UW10 78 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 NSD3Q9BZ95 1437 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 MLH3Q9UHC1 1453 aa0.1□□□□□ -2.39
PKHD1L1-203ENST00000533183 TMEM262E9PQX1 116 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 SPRR1AP35321 89 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 C10orf113Q5VZT2 155 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 SPRR2FQ96RM1 72 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 C12orf57Q99622 126 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 DNMBPQ6XZF7 1577 aa0.09□□□□□ -2.4
PKHD1L1-203ENST00000533183 ARHGAP5Q13017 1502 aa0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 ZFYVE16Q7Z3T8 1539 aa0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 DIP2CQ9Y2E4 1556 aa0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 URB1O60287 2271 aaKnown RBP0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 MUC17Q685J3 4493 aa0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 SHPRHQ149N8 1683 aa0.08□□□□□ -2.4
PKHD1L1-203ENST00000533183 POLA1P09884 1462 aaPredicted RBP0.07□□□□□ -2.4
PKHD1L1-203ENST00000533183 MYH4Q9Y623 1939 aa0.07□□□□□ -2.4
PKHD1L1-203ENST00000533183 AKAP12Q02952 1782 aa0.06□□□□□ -2.4
PKHD1L1-203ENST00000533183 NRXN3Q9Y4C0 1643 aa0.06□□□□□ -2.4
PKHD1L1-203ENST00000533183 A0A1B0GWA3 101 aa0.06□□□□□ -2.4
PKHD1L1-203ENST00000533183 CRYM-AS1A6NIL9 109 aa0.06□□□□□ -2.4
PKHD1L1-203ENST00000533183 EPRSP07814 1512 aaKnown RBP0.06□□□□□ -2.4
PKHD1L1-203ENST00000533183 DNAH6Q9C0G6 4158 aa0.06□□□□□ -2.4
PKHD1L1-203ENST00000533183 KDM5DQ9BY66 1539 aa0.05□□□□□ -2.4
PKHD1L1-203ENST00000533183 ARHGEF12Q9NZN5 1544 aa0.05□□□□□ -2.4
PKHD1L1-203ENST00000533183 C14orf144Q96I85 54 aa0.05□□□□□ -2.4
PKHD1L1-203ENST00000533183 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
PKHD1L1-203ENST00000533183 ADCY10Q96PN6 1610 aa0.05□□□□□ -2.4
PKHD1L1-203ENST00000533183 DNAJC13O75165 2243 aa0.05□□□□□ -2.4
PKHD1L1-203ENST00000533183 SMR3BP02814 79 aaPredicted RBP0.04□□□□□ -2.4
PKHD1L1-203ENST00000533183 FDCSPQ8NFU4 85 aa0.04□□□□□ -2.4
PKHD1L1-203ENST00000533183 PRO1933Q9H354 126 aa0.04□□□□□ -2.4
PKHD1L1-203ENST00000533183 ANKRD26Q9UPS8 1709 aa0.04□□□□□ -2.4
PKHD1L1-203ENST00000533183 PLEKHH2Q8IVE3 1493 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 TEX14Q8IWB6 1497 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 RAPGEF2Q9Y4G8 1499 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 hADV29S1A0JD25 119 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 FAM223BA6NKX1 122 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 SAA2P0DJI9 122 aaPredicted RBP0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 SEC11AP67812 179 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 XRN1Q8IZH2 1706 aaKnown RBP0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 FMN2Q9NZ56 1722 aa0.03□□□□□ -2.4
PKHD1L1-203ENST00000533183 NKTRP30414 1462 aaKnown RBP0.03□□□□□ -2.41
PKHD1L1-203ENST00000533183 VPS13BQ7Z7G8 4022 aa0.03□□□□□ -2.41
PKHD1L1-203ENST00000533183 KNDC1Q76NI1 1749 aa0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 COX6B1P14854 86 aa0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 CGREF1Q99674 301 aa0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 TCEAL7Q9BRU2 100 aa0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 TTC37Q6PGP7 1564 aa0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 POLR1AO95602 1720 aaPredicted RBP0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 TRBV7-4A0A0J9YYF1 115 aa0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 TMEM218A2RU14 115 aa0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 MON2Q7Z3U7 1717 aa0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 ATP6V1G2-DDX39BF2Z307 99 aa0□□□□□ -2.41
PKHD1L1-203ENST00000533183 LRRC9Q6ZRR7 1453 aa0□□□□□ -2.41
PKHD1L1-203ENST00000533183 LINC01600Q96MT4 127 aa0□□□□□ -2.41
PKHD1L1-203ENST00000533183 MAGI1Q96QZ7 1491 aaPredicted RBP0□□□□□ -2.41
PKHD1L1-203ENST00000533183 DNAH11Q96DT5 4516 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 KIF20BQ96Q89 1820 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 RGPD8O14715 1765 aaPredicted RBP-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 RGPD5Q99666 1765 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 LCN9Q8WX39 176 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 VPS13DQ5THJ4 4388 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 A0A0G2JMZ2 1700 aa-0.01□□□□□ -2.41
PKHD1L1-203ENST00000533183 ABCA6Q8N139 1617 aa-0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.02□□□□□ -2.41
PKHD1L1-203ENST00000533183 TRAV30A0A087WSZ9 112 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms