RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 LINC00308Q8TCZ7 52 aa7.02□□□□□ -1.29
TRAPPC4-211ENST00000533012 TRAV13-2A0A0B4J235 113 aa7.01□□□□□ -1.29
TRAPPC4-211ENST00000533012 UBE2BP63146 152 aa7.01□□□□□ -1.29
TRAPPC4-211ENST00000533012 ADAMTSL4-AS1Q5T5F5 129 aa7.01□□□□□ -1.29
TRAPPC4-211ENST00000533012 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
TRAPPC4-211ENST00000533012 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
TRAPPC4-211ENST00000533012 VPREB1P12018 145 aa7□□□□□ -1.29
TRAPPC4-211ENST00000533012 ATXN8Q156A1 80 aa7□□□□□ -1.29
TRAPPC4-211ENST00000533012 H3BMG7 143 aa6.98□□□□□ -1.29
TRAPPC4-211ENST00000533012 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
TRAPPC4-211ENST00000533012 NPC2P61916 151 aa6.98□□□□□ -1.29
TRAPPC4-211ENST00000533012 OCIAD2Q56VL3 154 aa6.98□□□□□ -1.29
TRAPPC4-211ENST00000533012 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
TRAPPC4-211ENST00000533012 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 H7C2G1 150 aa6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 M0R378 163 aa6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 Q8NDZ9 215 aa6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 PSORS1C2Q9UIG4 136 aa6.97□□□□□ -1.29
TRAPPC4-211ENST00000533012 NDUFC2O95298 119 aa6.96□□□□□ -1.3
TRAPPC4-211ENST00000533012 C1orf137Q5JT78 98 aa6.96□□□□□ -1.3
TRAPPC4-211ENST00000533012 SOSTDC1Q6X4U4 206 aa6.96□□□□□ -1.3
TRAPPC4-211ENST00000533012 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
TRAPPC4-211ENST00000533012 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC4-211ENST00000533012 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
TRAPPC4-211ENST00000533012 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 NCR3O14931 201 aa6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 TCL1BO95988 128 aa6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
TRAPPC4-211ENST00000533012 IGKV2-28A0A075B6P5 120 aa6.93□□□□□ -1.3
TRAPPC4-211ENST00000533012 TRIAP1O43715 76 aa6.93□□□□□ -1.3
TRAPPC4-211ENST00000533012 IGKV2D-28P01615 120 aa6.93□□□□□ -1.3
TRAPPC4-211ENST00000533012 H3BT86 120 aa6.92□□□□□ -1.3
TRAPPC4-211ENST00000533012 SNCGO76070 127 aa6.92□□□□□ -1.3
TRAPPC4-211ENST00000533012 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
TRAPPC4-211ENST00000533012 SRRM2Q9UQ35 2752 aaKnown RBP6.92□□□□□ -1.3
TRAPPC4-211ENST00000533012 SLC25A20O43772 301 aa6.91□□□□□ -1.3
TRAPPC4-211ENST00000533012 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
TRAPPC4-211ENST00000533012 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
TRAPPC4-211ENST00000533012 PRO0461Q9UI25 63 aa6.91□□□□□ -1.3
TRAPPC4-211ENST00000533012 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 C9JAW5 83 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 H0YGX0 51 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 LST1O00453 97 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 BCE1O60756 84 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 TEN1Q86WV5 123 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 PPDPFLQ8WWR9 84 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 LINC01600Q96MT4 127 aa6.9□□□□□ -1.3
TRAPPC4-211ENST00000533012 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
TRAPPC4-211ENST00000533012 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
TRAPPC4-211ENST00000533012 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
TRAPPC4-211ENST00000533012 OR13C6PQ8NH95 151 aa6.89□□□□□ -1.31
TRAPPC4-211ENST00000533012 TMEM126AQ9H061 195 aa6.89□□□□□ -1.31
TRAPPC4-211ENST00000533012 PRYO14603 147 aa6.88□□□□□ -1.31
TRAPPC4-211ENST00000533012 TRACP01848 142 aa6.88□□□□□ -1.31
TRAPPC4-211ENST00000533012 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
TRAPPC4-211ENST00000533012 ZNF861PO60384 105 aa6.87□□□□□ -1.31
TRAPPC4-211ENST00000533012 DNAL4O96015 105 aa6.87□□□□□ -1.31
TRAPPC4-211ENST00000533012 IGLV6-57P01721 117 aa6.87□□□□□ -1.31
TRAPPC4-211ENST00000533012 UBE2AP49459 152 aa6.87□□□□□ -1.31
TRAPPC4-211ENST00000533012 A0A1B0GX51 115 aa6.86□□□□□ -1.31
TRAPPC4-211ENST00000533012 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
TRAPPC4-211ENST00000533012 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
TRAPPC4-211ENST00000533012 TRAV23DV6A0A075B6W5 121 aa6.84□□□□□ -1.31
TRAPPC4-211ENST00000533012 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
TRAPPC4-211ENST00000533012 SPRR1AP35321 89 aa6.84□□□□□ -1.31
TRAPPC4-211ENST00000533012 MTURNQ8N3F0 131 aa6.84□□□□□ -1.31
TRAPPC4-211ENST00000533012 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
TRAPPC4-211ENST00000533012 PCLOQ9Y6V0 5065 aa6.84□□□□□ -1.31
TRAPPC4-211ENST00000533012 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.32
TRAPPC4-211ENST00000533012 H0Y9J4 135 aa6.83□□□□□ -1.32
TRAPPC4-211ENST00000533012 PRLHP81277 87 aa6.83□□□□□ -1.32
TRAPPC4-211ENST00000533012 CLEC2BQ92478 149 aa6.83□□□□□ -1.32
TRAPPC4-211ENST00000533012 H3BQ85 93 aa6.82□□□□□ -1.32
TRAPPC4-211ENST00000533012 ZNF73O43830 326 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC4-211ENST00000533012 GHRHP01286 108 aa6.82□□□□□ -1.32
TRAPPC4-211ENST00000533012 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC4-211ENST00000533012 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
TRAPPC4-211ENST00000533012 SMIM11BQ8TCY0 68 aa6.82□□□□□ -1.32
TRAPPC4-211ENST00000533012 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC4-211ENST00000533012 B5MCH6 92 aa6.8□□□□□ -1.32
TRAPPC4-211ENST00000533012 OXTP01178 125 aa6.8□□□□□ -1.32
TRAPPC4-211ENST00000533012 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
TRAPPC4-211ENST00000533012 C6orf99Q4VX62 202 aa6.78□□□□□ -1.32
TRAPPC4-211ENST00000533012 Q6ZRX8 168 aa6.78□□□□□ -1.32
TRAPPC4-211ENST00000533012 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.32
TRAPPC4-211ENST00000533012 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC4-211ENST00000533012 ACYP1P07311 99 aa6.77□□□□□ -1.33
TRAPPC4-211ENST00000533012 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
TRAPPC4-211ENST00000533012 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
TRAPPC4-211ENST00000533012 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
TRAPPC4-211ENST00000533012 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
TRAPPC4-211ENST00000533012 TRBV7-6A0A0J9YX20 115 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms