RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	MRPL33	O75394	65 aa	Known RBP	0.97	□□□□□ -2.25
RDX-208	ENST00000530085	SNCG	O76070	127 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	APOC2	P02655	101 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	CBLN1	P23435	193 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085		Q5VSD8	79 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	C12orf73	Q69YU5	71 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	XAF1	Q6GPH4	301 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	VMO1	Q7Z5L0	202 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	TSKU	Q8WUA8	353 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	C14orf144	Q96I85	54 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	SPANXD	Q9BXN6	97 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	DNAH8	Q96JB1	4490 aa		0.97	□□□□□ -2.25
RDX-208	ENST00000530085	TEX49	A0A1B0GTD5	131 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	LOC101927531	A0A1B0GV80	90 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085		A0A1W2PPM0	123 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	C20orf202	A1L168	122 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	DEFB4A	O15263	64 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	TPPP2	P59282	170 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	UBE2G1	P62253	170 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	PPP3R1	P63098	170 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	LELP1	Q5T871	98 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	IFI27L1	Q96BM0	104 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	RPRM	Q9NS64	109 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	TNXB	P22105	4242 aa		0.96	□□□□□ -2.26
RDX-208	ENST00000530085	TRAV12-3	A0A0B4J271	114 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085		A6NIN4	97 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085	SNAPC5	O75971	98 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085	GYPA	P02724	150 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085	FXYD3	Q14802	87 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085		Q6ZQY7	126 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085	RPS27L	Q71UM5	84 aa	Known RBP	0.95	□□□□□ -2.26
RDX-208	ENST00000530085		Q8N8P6	123 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085	PPP3R2	Q96LZ3	170 aa		0.95	□□□□□ -2.26
RDX-208	ENST00000530085	SYNE2	Q8WXH0	6885 aa	Known RBP	0.95	□□□□□ -2.26
RDX-208	ENST00000530085	PIGBOS1	A0A0B4J2F0	54 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	IFNA17	P01571	189 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	NPC2	P61916	151 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	CATR1	Q13166	79 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	RPL7L1	Q6DKI1	246 aa	Known RBP	0.94	□□□□□ -2.26
RDX-208	ENST00000530085	MRPL54	Q6P161	138 aa	Known RBP	0.94	□□□□□ -2.26
RDX-208	ENST00000530085	C5orf56	Q8N8D9	126 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	LINC00208	Q96KT6	92 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	HILPDA	Q9Y5L2	63 aa		0.94	□□□□□ -2.26
RDX-208	ENST00000530085	TCRBV3S1	A0A5B6	114 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	OOSP1	A8MZH6	123 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	SMIM6	P0DI80	62 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	RBP2	P50120	134 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	CAV3	P56539	151 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	S100A7L2	Q5SY68	101 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	CYP2G1P	Q6ZSU1	146 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.93	□□□□□ -2.26
RDX-208	ENST00000530085	C4orf33	Q8N1A6	199 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	C10orf82	Q8WW14	230 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	WFDC6	Q9BQY6	131 aa		0.93	□□□□□ -2.26
RDX-208	ENST00000530085	TRBV10-3	A0A0K0K1G6	114 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	CCL3L1	P16619	93 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	UBE2D1	P51668	147 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	INSL4	Q14641	139 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	ZNF56	Q15929	161 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	C9orf153	Q5TBE3	101 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	ZNF818P	Q6ZRF7	136 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	COA4	Q9NYJ1	87 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	APLN	Q9ULZ1	77 aa		0.92	□□□□□ -2.26
RDX-208	ENST00000530085	TRBV30	A0A0K0K1B3	111 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	HCG22	E2RYF7	251 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	SIX6	O95475	246 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	RBM3	P98179	157 aa	Known RBP	0.91	□□□□□ -2.26
RDX-208	ENST00000530085	DEFA5	Q01523	94 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	HSD52	Q0P140	79 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	KLKP1	Q107X0	134 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	DEFB135	Q30KP9	77 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	GTF2H5	Q6ZYL4	71 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	COMMD6	Q7Z4G1	85 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	C5orf38	Q86SI9	138 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	UBE2DNL	Q8IWF7	75 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	SPTSSB	Q8NFR3	76 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	PPP1R1C	Q8WVI7	109 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	DSCR8	Q96T75	97 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085	BET1L	Q9NYM9	111 aa		0.91	□□□□□ -2.26
RDX-208	ENST00000530085		G3V318	75 aa		0.9	□□□□□ -2.27
RDX-208	ENST00000530085	IFITM1	P13164	125 aa		0.9	□□□□□ -2.27
RDX-208	ENST00000530085	ELOF1	P60002	83 aa	Known RBP	0.9	□□□□□ -2.27
RDX-208	ENST00000530085	SSBP1	Q04837	148 aa	Known RBP	0.9	□□□□□ -2.27
RDX-208	ENST00000530085		Q86TA4	180 aa		0.9	□□□□□ -2.27
RDX-208	ENST00000530085	C20orf197	Q8N268	126 aa		0.9	□□□□□ -2.27
RDX-208	ENST00000530085	SVBP	Q8N300	66 aa		0.9	□□□□□ -2.27
RDX-208	ENST00000530085	MACF1	Q9UPN3	7388 aa	Known RBP	0.89	□□□□□ -2.27
RDX-208	ENST00000530085	TRAV30	A0A087WSZ9	112 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	TRBV7-1	A0A0A6YYK4	115 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	TRAV13-2	A0A0B4J235	113 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	TMEM218	A2RU14	115 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	SSSCA1	O60232	199 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	HMGN2	P05204	90 aa	Known RBP	0.89	□□□□□ -2.27
RDX-208	ENST00000530085	HTN3	P15516	51 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	ACBD7	Q8N6N7	88 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	COX7B2	Q8TF08	81 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	LEAP2	Q969E1	77 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085	DPH3P1	Q9H4G8	78 aa		0.89	□□□□□ -2.27
RDX-208	ENST00000530085		A0A087WTM6	91 aa		0.88	□□□□□ -2.27
RDX-208	ENST00000530085	RBAKDN	A6NC62	111 aa		0.88	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms