RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	LINC00588	Q9Y4M8	146 aa		5.06	□□□□□ -1.6
CTNND1-223	ENST00000529986		Q8NAQ8	132 aa		5.05	□□□□□ -1.6
CTNND1-223	ENST00000529986	C8orf17	Q9NRJ1	99 aa		5.05	□□□□□ -1.6
CTNND1-223	ENST00000529986	KCNQ1DN	Q9H478	68 aa		5.04	□□□□□ -1.6
CTNND1-223	ENST00000529986	TYMSOS	Q8TAI1	123 aa		5.04	□□□□□ -1.6
CTNND1-223	ENST00000529986	RTL8C	O15255	209 aa		5.04	□□□□□ -1.6
CTNND1-223	ENST00000529986	CEP350	Q5VT06	3117 aa		5.03	□□□□□ -1.6
CTNND1-223	ENST00000529986	POLQ	O75417	2590 aa		5.03	□□□□□ -1.6
CTNND1-223	ENST00000529986	CRIPT	Q9P021	101 aa		5.03	□□□□□ -1.6
CTNND1-223	ENST00000529986		H3BNG1	76 aa		5.03	□□□□□ -1.6
CTNND1-223	ENST00000529986	OBSCN-AS1	Q96MR7	158 aa		5.03	□□□□□ -1.6
CTNND1-223	ENST00000529986	EPG5	Q9HCE0	2579 aa		5.03	□□□□□ -1.6
CTNND1-223	ENST00000529986	KRTAP24-1	Q3LI83	254 aa		5.02	□□□□□ -1.61
CTNND1-223	ENST00000529986	ACAN	P16112	2415 aa		5.02	□□□□□ -1.61
CTNND1-223	ENST00000529986		J3QL48	77 aa		5.01	□□□□□ -1.61
CTNND1-223	ENST00000529986	ANAPC11	Q9NYG5	84 aa		5	□□□□□ -1.61
CTNND1-223	ENST00000529986	CDC42SE1	Q9NRR8	79 aa		5	□□□□□ -1.61
CTNND1-223	ENST00000529986		A0A1B0GVX0	72 aa		5	□□□□□ -1.61
CTNND1-223	ENST00000529986		A0A1W2PNM2	257 aa		5	□□□□□ -1.61
CTNND1-223	ENST00000529986	C15orf56	Q8N910	161 aa		5	□□□□□ -1.61
CTNND1-223	ENST00000529986		Q1T7F1	81 aa		4.99	□□□□□ -1.61
CTNND1-223	ENST00000529986	NBDY	A0A0U1RRE5	68 aa		4.99	□□□□□ -1.61
CTNND1-223	ENST00000529986		A0A0D9SG42	100 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	DNAH12	Q6ZR08	3092 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	CSNK1G2-AS1	Q8NCQ2	148 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	RBM12B-AS1	Q9P1G2	102 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	DNAH10OS	P0CZ25	163 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	CYSTM1	Q9H1C7	97 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	PRR26	Q8N8Z3	221 aa		4.98	□□□□□ -1.61
CTNND1-223	ENST00000529986	FAM229B	Q4G0N7	80 aa		4.97	□□□□□ -1.61
CTNND1-223	ENST00000529986		Q5XG85	94 aa		4.97	□□□□□ -1.61
CTNND1-223	ENST00000529986	PRRC2C	Q9Y520	2896 aa	Known RBP	4.97	□□□□□ -1.61
CTNND1-223	ENST00000529986	C9orf92	A6NGG3	77 aa		4.97	□□□□□ -1.61
CTNND1-223	ENST00000529986	SPANXA2-OT1	Q8N9U9	137 aa		4.96	□□□□□ -1.61
CTNND1-223	ENST00000529986		H3BS24	57 aa		4.96	□□□□□ -1.62
CTNND1-223	ENST00000529986		Q8N1X5	172 aa		4.96	□□□□□ -1.62
CTNND1-223	ENST00000529986	OCR1	Q9BZK8	76 aa		4.95	□□□□□ -1.62
CTNND1-223	ENST00000529986	PRR34	Q9NV39	138 aa		4.95	□□□□□ -1.62
CTNND1-223	ENST00000529986	FLNB	O75369	2602 aa	Known RBP	4.95	□□□□□ -1.62
CTNND1-223	ENST00000529986	PRAC1	Q96KF2	57 aa		4.94	□□□□□ -1.62
CTNND1-223	ENST00000529986	GIG44	P09565	113 aa	Predicted RBP	4.94	□□□□□ -1.62
CTNND1-223	ENST00000529986	C9orf163	Q8N9P6	203 aa		4.94	□□□□□ -1.62
CTNND1-223	ENST00000529986	FAM104A	Q969W3	186 aa		4.94	□□□□□ -1.62
CTNND1-223	ENST00000529986	ANKRD17	O75179	2603 aa	Known RBP	4.93	□□□□□ -1.62
CTNND1-223	ENST00000529986		A0A096LNT2	108 aa		4.93	□□□□□ -1.62
CTNND1-223	ENST00000529986	FP248	Q71RG6	208 aa	Predicted RBP	4.92	□□□□□ -1.62
CTNND1-223	ENST00000529986	LINC01554	Q52M75	96 aa		4.92	□□□□□ -1.62
CTNND1-223	ENST00000529986	CASC10	Q5T4H9	136 aa		4.92	□□□□□ -1.62
CTNND1-223	ENST00000529986	IGLV5-48	A0A075B6I7	105 aa		4.91	□□□□□ -1.62
CTNND1-223	ENST00000529986	ZNF861P	O60384	105 aa		4.9	□□□□□ -1.63
CTNND1-223	ENST00000529986	ZNF575	Q86XF7	245 aa		4.9	□□□□□ -1.63
CTNND1-223	ENST00000529986	BRCA2	P51587	3418 aa		4.9	□□□□□ -1.63
CTNND1-223	ENST00000529986	BPTF	Q12830	3046 aa		4.89	□□□□□ -1.63
CTNND1-223	ENST00000529986	CR1	P17927	2039 aa		4.88	□□□□□ -1.63
CTNND1-223	ENST00000529986	USP24	Q9UPU5	2620 aa		4.88	□□□□□ -1.63
CTNND1-223	ENST00000529986		Q75L30	129 aa		4.88	□□□□□ -1.63
CTNND1-223	ENST00000529986	C19orf73	Q9NVV2	129 aa		4.88	□□□□□ -1.63
CTNND1-223	ENST00000529986	HECTD1	Q9ULT8	2610 aa		4.87	□□□□□ -1.63
CTNND1-223	ENST00000529986	ASB16-AS1	Q495Z4	193 aa		4.87	□□□□□ -1.63
CTNND1-223	ENST00000529986	PLA2G2D	Q9UNK4	145 aa		4.87	□□□□□ -1.63
CTNND1-223	ENST00000529986	TLX1NB	P0CAT3	122 aa		4.87	□□□□□ -1.63
CTNND1-223	ENST00000529986	LINC00304	Q8N9R0	145 aa		4.87	□□□□□ -1.63
CTNND1-223	ENST00000529986	KRTAP10-11	P60412	298 aa		4.86	□□□□□ -1.63
CTNND1-223	ENST00000529986	OXT	P01178	125 aa		4.86	□□□□□ -1.63
CTNND1-223	ENST00000529986		Q8N9P0	234 aa	Predicted RBP	4.86	□□□□□ -1.63
CTNND1-223	ENST00000529986	SPRR4	Q96PI1	79 aa		4.86	□□□□□ -1.63
CTNND1-223	ENST00000529986	PSORS1C2	Q9UIG4	136 aa		4.86	□□□□□ -1.63
CTNND1-223	ENST00000529986	LINC00612	Q8N6U2	182 aa		4.85	□□□□□ -1.63
CTNND1-223	ENST00000529986	IGLV7-46	A0A075B6I9	117 aa		4.85	□□□□□ -1.63
CTNND1-223	ENST00000529986	IGLV5-37	A0A075B6J1	123 aa		4.84	□□□□□ -1.63
CTNND1-223	ENST00000529986	SMR3B	P02814	79 aa	Predicted RBP	4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986		Q5VV11	94 aa		4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	LUZP6	Q538Z0	58 aa		4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	KRTAP10-3	P60369	221 aa		4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	CNBP	P62633	177 aa	Known RBP	4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	CSAG1	Q6PB30	78 aa		4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	COX6B2	Q6YFQ2	88 aa		4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	HRES1	P13985	223 aa		4.83	□□□□□ -1.64
CTNND1-223	ENST00000529986	IGLV7-43	P04211	117 aa		4.82	□□□□□ -1.64
CTNND1-223	ENST00000529986	SPINK7	P58062	85 aa		4.82	□□□□□ -1.64
CTNND1-223	ENST00000529986		A0A087WTM6	91 aa		4.82	□□□□□ -1.64
CTNND1-223	ENST00000529986	KRTAP1-3	Q8IUG1	177 aa		4.81	□□□□□ -1.64
CTNND1-223	ENST00000529986		A0A1B0GU33	70 aa		4.81	□□□□□ -1.64
CTNND1-223	ENST00000529986	LINC01558	Q9Y6Z2	57 aa		4.81	□□□□□ -1.64
CTNND1-223	ENST00000529986		K7EIL1	84 aa		4.8	□□□□□ -1.64
CTNND1-223	ENST00000529986		Q8NDZ9	215 aa		4.8	□□□□□ -1.64
CTNND1-223	ENST00000529986	LAMA3	Q16787	3333 aa		4.8	□□□□□ -1.64
CTNND1-223	ENST00000529986	RANBP2	P49792	3224 aa	Known RBP	4.79	□□□□□ -1.64
CTNND1-223	ENST00000529986	DMAC1	Q96GE9	116 aa		4.78	□□□□□ -1.64
CTNND1-223	ENST00000529986	CHD7	Q9P2D1	2997 aa		4.78	□□□□□ -1.64
CTNND1-223	ENST00000529986	MGAM2	Q2M2H8	2515 aa		4.77	□□□□□ -1.65
CTNND1-223	ENST00000529986	MKI67	P46013	3256 aa	Known RBP	4.77	□□□□□ -1.65
CTNND1-223	ENST00000529986	MMP24-AS1	A0A0U1RRL7	71 aa		4.77	□□□□□ -1.65
CTNND1-223	ENST00000529986	KRTAP1-1	Q07627	177 aa		4.77	□□□□□ -1.65
CTNND1-223	ENST00000529986		A0A0C4DFX4	3053 aa		4.76	□□□□□ -1.65
CTNND1-223	ENST00000529986		A0A0A0MQY5	61 aa		4.76	□□□□□ -1.65
CTNND1-223	ENST00000529986	HTT	P42858	3142 aa		4.76	□□□□□ -1.65
CTNND1-223	ENST00000529986	CHD9	Q3L8U1	2897 aa		4.75	□□□□□ -1.65
CTNND1-223	ENST00000529986	C5orf42	Q9H799	3197 aa		4.74	□□□□□ -1.65
CTNND1-223	ENST00000529986	CFAP54	Q96N23	3096 aa		4.72	□□□□□ -1.65

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