RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 A0A0G2JQZ4 141 aa9.85□□□□□ -0.83
SSRP1-204ENST00000529002 MYMXA0A1B0GTQ4 84 aa9.85□□□□□ -0.83
SSRP1-204ENST00000529002 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
SSRP1-204ENST00000529002 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
SSRP1-204ENST00000529002 Q1RN00 199 aa9.83□□□□□ -0.84
SSRP1-204ENST00000529002 SEC11CQ9BY50 192 aa9.83□□□□□ -0.84
SSRP1-204ENST00000529002 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
SSRP1-204ENST00000529002 S100PP25815 95 aa9.82□□□□□ -0.84
SSRP1-204ENST00000529002 C5orf52A6NGY3 159 aa9.81□□□□□ -0.84
SSRP1-204ENST00000529002 LCE2BO14633 110 aa9.81□□□□□ -0.84
SSRP1-204ENST00000529002 NPC2P61916 151 aa9.81□□□□□ -0.84
SSRP1-204ENST00000529002 CD164Q04900 197 aa9.81□□□□□ -0.84
SSRP1-204ENST00000529002 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
SSRP1-204ENST00000529002 COX19Q49B96 90 aa9.8□□□□□ -0.84
SSRP1-204ENST00000529002 SOSTDC1Q6X4U4 206 aa9.8□□□□□ -0.84
SSRP1-204ENST00000529002 SLC25A34Q6PIV7 304 aa9.79□□□□□ -0.84
SSRP1-204ENST00000529002 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
SSRP1-204ENST00000529002 MACF1Q9UPN3 7388 aaKnown RBP9.78□□□□□ -0.84
SSRP1-204ENST00000529002 SYNE2Q8WXH0 6885 aaKnown RBP9.78□□□□□ -0.84
SSRP1-204ENST00000529002 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
SSRP1-204ENST00000529002 MIEN1Q9BRT3 115 aa9.78□□□□□ -0.84
SSRP1-204ENST00000529002 NDUFC2O95298 119 aa9.77□□□□□ -0.85
SSRP1-204ENST00000529002 Q5XG85 94 aa9.77□□□□□ -0.85
SSRP1-204ENST00000529002 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
SSRP1-204ENST00000529002 PRO1933Q9H354 126 aa9.77□□□□□ -0.85
SSRP1-204ENST00000529002 MT2AP02795 61 aa9.75□□□□□ -0.85
SSRP1-204ENST00000529002 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
SSRP1-204ENST00000529002 LEPROTO15243 131 aa9.73□□□□□ -0.85
SSRP1-204ENST00000529002 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
SSRP1-204ENST00000529002 TAL2Q16559 108 aa9.72□□□□□ -0.85
SSRP1-204ENST00000529002 TMEM218A2RU14 115 aa9.71□□□□□ -0.86
SSRP1-204ENST00000529002 H0Y8G0 127 aa9.71□□□□□ -0.86
SSRP1-204ENST00000529002 ADAMTSL4-AS1Q5T5F5 129 aa9.71□□□□□ -0.86
SSRP1-204ENST00000529002 COMMD7Q86VX2 200 aa9.71□□□□□ -0.86
SSRP1-204ENST00000529002 DHRS4-AS1Q9P1J3 65 aa9.71□□□□□ -0.86
SSRP1-204ENST00000529002 AKR1D1P51857 326 aa9.7□□□□□ -0.86
SSRP1-204ENST00000529002 J3QQQ9 107 aa9.69□□□□□ -0.86
SSRP1-204ENST00000529002 MT1FP04733 61 aa9.69□□□□□ -0.86
SSRP1-204ENST00000529002 OR13C6PQ8NH95 151 aa9.68□□□□□ -0.86
SSRP1-204ENST00000529002 ATP11AUNQ6ZP68 121 aa9.66□□□□□ -0.86
SSRP1-204ENST00000529002 KRTAP9-3Q9BYQ3 159 aa9.66□□□□□ -0.86
SSRP1-204ENST00000529002 TEX49A0A1B0GTD5 131 aa9.65□□□□□ -0.86
SSRP1-204ENST00000529002 RHEBQ15382 184 aa9.65□□□□□ -0.86
SSRP1-204ENST00000529002 COX7BP24311 80 aa9.64□□□□□ -0.87
SSRP1-204ENST00000529002 IFITM2Q01629 132 aa9.64□□□□□ -0.87
SSRP1-204ENST00000529002 C20orf202A1L168 122 aa9.63□□□□□ -0.87
SSRP1-204ENST00000529002 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
SSRP1-204ENST00000529002 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
SSRP1-204ENST00000529002 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
SSRP1-204ENST00000529002 A0A0J9YXY3 114 aa9.62□□□□□ -0.87
SSRP1-204ENST00000529002 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
SSRP1-204ENST00000529002 NMUP48645 174 aa9.61□□□□□ -0.87
SSRP1-204ENST00000529002 C6orf99Q4VX62 202 aa9.61□□□□□ -0.87
SSRP1-204ENST00000529002 Q75L30 129 aa9.61□□□□□ -0.87
SSRP1-204ENST00000529002 CHCHD1Q96BP2 118 aaKnown RBP9.61□□□□□ -0.87
SSRP1-204ENST00000529002 PMCHL2Q9BQD1 86 aa9.61□□□□□ -0.87
SSRP1-204ENST00000529002 CLLU1Q5K131 121 aa9.6□□□□□ -0.87
SSRP1-204ENST00000529002 UQCC3Q6UW78 93 aa9.6□□□□□ -0.87
SSRP1-204ENST00000529002 CBY1Q9Y3M2 126 aa9.6□□□□□ -0.87
SSRP1-204ENST00000529002 TCL1BO95988 128 aa9.59□□□□□ -0.87
SSRP1-204ENST00000529002 KRTAP10-10P60014 251 aa9.57□□□□□ -0.88
SSRP1-204ENST00000529002 LINC00308Q8TCZ7 52 aa9.56□□□□□ -0.88
SSRP1-204ENST00000529002 SPANXCQ9NY87 97 aa9.56□□□□□ -0.88
SSRP1-204ENST00000529002 HERVK_113P61574 105 aa9.55□□□□□ -0.88
SSRP1-204ENST00000529002 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
SSRP1-204ENST00000529002 HSBP1O75506 76 aa9.54□□□□□ -0.88
SSRP1-204ENST00000529002 LITAFQ99732 161 aa9.54□□□□□ -0.88
SSRP1-204ENST00000529002 SPANXDQ9BXN6 97 aa9.54□□□□□ -0.88
SSRP1-204ENST00000529002 PLNP26678 52 aa9.53□□□□□ -0.88
SSRP1-204ENST00000529002 DPM2O94777 84 aa9.52□□□□□ -0.89
SSRP1-204ENST00000529002 C10orf91Q5T1B1 145 aa9.52□□□□□ -0.89
SSRP1-204ENST00000529002 KRTAP19-6Q3LI70 58 aa9.5□□□□□ -0.89
SSRP1-204ENST00000529002 TRBV20-1A0A075B6N2 111 aa9.49□□□□□ -0.89
SSRP1-204ENST00000529002 LEPROTL1O95214 131 aa9.49□□□□□ -0.89
SSRP1-204ENST00000529002 IGKCP01834 107 aa9.49□□□□□ -0.89
SSRP1-204ENST00000529002 Q96NJ1 140 aa9.49□□□□□ -0.89
SSRP1-204ENST00000529002 KRTAP6-3Q3LI67 103 aa9.48□□□□□ -0.89
SSRP1-204ENST00000529002 LINC00310P59036 64 aa9.46□□□□□ -0.9
SSRP1-204ENST00000529002 FABP4P15090 132 aa9.45□□□□□ -0.9
SSRP1-204ENST00000529002 LINC00518Q8N0U6 118 aa9.45□□□□□ -0.9
SSRP1-204ENST00000529002 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
SSRP1-204ENST00000529002 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
SSRP1-204ENST00000529002 E9PLD3 99 aa9.43□□□□□ -0.9
SSRP1-204ENST00000529002 TRBV7-7A0A0K0K1E9 115 aa9.42□□□□□ -0.9
SSRP1-204ENST00000529002 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
SSRP1-204ENST00000529002 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
SSRP1-204ENST00000529002 C20orf166-AS1Q96NR2 134 aa9.42□□□□□ -0.9
SSRP1-204ENST00000529002 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
SSRP1-204ENST00000529002 SERF1AO75920 110 aa9.41□□□□□ -0.9
SSRP1-204ENST00000529002 IGFL1Q6UW32 110 aa9.4□□□□□ -0.9
SSRP1-204ENST00000529002 A8MUU9 505 aa9.39□□□□□ -0.91
SSRP1-204ENST00000529002 TIMM17BO60830 172 aa9.39□□□□□ -0.91
SSRP1-204ENST00000529002 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
SSRP1-204ENST00000529002 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
SSRP1-204ENST00000529002 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
SSRP1-204ENST00000529002 F8WEM9 126 aa9.37□□□□□ -0.91
SSRP1-204ENST00000529002 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
SSRP1-204ENST00000529002 A6NDN8 102 aa9.34□□□□□ -0.91
SSRP1-204ENST00000529002 APOC3P02656 99 aa9.34□□□□□ -0.91
SSRP1-204ENST00000529002 CLEC2BQ92478 149 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms