RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
SSBP3-211ENST00000528787 PRO1854Q9UHT4 67 aa4.94□□□□□ -1.62
SSBP3-211ENST00000528787 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
SSBP3-211ENST00000528787 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
SSBP3-211ENST00000528787 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
SSBP3-211ENST00000528787 INAFM2P0DMQ5 153 aa4.93□□□□□ -1.62
SSBP3-211ENST00000528787 Q5VSD8 79 aa4.93□□□□□ -1.62
SSBP3-211ENST00000528787 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
SSBP3-211ENST00000528787 DHRS4-AS1Q9P1J3 65 aa4.93□□□□□ -1.62
SSBP3-211ENST00000528787 A0A1B0GV90 55 aa4.92□□□□□ -1.62
SSBP3-211ENST00000528787 H0YGX0 51 aa4.92□□□□□ -1.62
SSBP3-211ENST00000528787 ZNF861PO60384 105 aa4.92□□□□□ -1.62
SSBP3-211ENST00000528787 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
SSBP3-211ENST00000528787 SPRR1AP35321 89 aa4.92□□□□□ -1.62
SSBP3-211ENST00000528787 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
SSBP3-211ENST00000528787 LYRM7Q5U5X0 104 aa4.92□□□□□ -1.62
SSBP3-211ENST00000528787 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
SSBP3-211ENST00000528787 CFC1BP0CG36 223 aa4.91□□□□□ -1.62
SSBP3-211ENST00000528787 CFC1P0CG37 223 aa4.91□□□□□ -1.62
SSBP3-211ENST00000528787 Q6ZRX8 168 aa4.91□□□□□ -1.62
SSBP3-211ENST00000528787 H3BQ85 93 aa4.9□□□□□ -1.63
SSBP3-211ENST00000528787 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
SSBP3-211ENST00000528787 COX7BP24311 80 aa4.9□□□□□ -1.63
SSBP3-211ENST00000528787 HAMPP81172 84 aa4.9□□□□□ -1.63
SSBP3-211ENST00000528787 C6orf99Q4VX62 202 aa4.9□□□□□ -1.63
SSBP3-211ENST00000528787 PSMB2P49721 201 aa4.89□□□□□ -1.63
SSBP3-211ENST00000528787 FXYD2P54710 66 aa4.89□□□□□ -1.63
SSBP3-211ENST00000528787 Q8NDZ9 215 aa4.89□□□□□ -1.63
SSBP3-211ENST00000528787 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
SSBP3-211ENST00000528787 A0A1B0GX51 115 aa4.88□□□□□ -1.63
SSBP3-211ENST00000528787 B5MCH6 92 aa4.88□□□□□ -1.63
SSBP3-211ENST00000528787 ELOF1P60002 83 aaKnown RBP4.88□□□□□ -1.63
SSBP3-211ENST00000528787 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
SSBP3-211ENST00000528787 SMIM11BQ8TCY0 68 aa4.88□□□□□ -1.63
SSBP3-211ENST00000528787 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
SSBP3-211ENST00000528787 H7C2G1 150 aa4.87□□□□□ -1.63
SSBP3-211ENST00000528787 HIGD2AQ9BW72 106 aa4.87□□□□□ -1.63
SSBP3-211ENST00000528787 KRTAP4-16G5E9R7 235 aaPredicted RBP4.86□□□□□ -1.63
SSBP3-211ENST00000528787 DNAL4O96015 105 aa4.86□□□□□ -1.63
SSBP3-211ENST00000528787 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
SSBP3-211ENST00000528787 PPDPFLQ8WWR9 84 aa4.86□□□□□ -1.63
SSBP3-211ENST00000528787 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
SSBP3-211ENST00000528787 hADV29S1A0JD25 119 aa4.85□□□□□ -1.63
SSBP3-211ENST00000528787 PRLHP81277 87 aa4.85□□□□□ -1.63
SSBP3-211ENST00000528787 BATFQ16520 125 aa4.85□□□□□ -1.63
SSBP3-211ENST00000528787 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
SSBP3-211ENST00000528787 COL5A1-AS1Q5SY13 56 aa4.85□□□□□ -1.63
SSBP3-211ENST00000528787 KRTAP13-1Q8IUC0 172 aa4.85□□□□□ -1.63
SSBP3-211ENST00000528787 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
SSBP3-211ENST00000528787 TRBV20-1A0A075B6N2 111 aa4.84□□□□□ -1.63
SSBP3-211ENST00000528787 OXTP01178 125 aa4.84□□□□□ -1.63
SSBP3-211ENST00000528787 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.84□□□□□ -1.63
SSBP3-211ENST00000528787 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
SSBP3-211ENST00000528787 KRTAP11-1Q8IUC1 163 aa4.83□□□□□ -1.64
SSBP3-211ENST00000528787 SMCR5Q8TEV8 140 aa4.83□□□□□ -1.64
SSBP3-211ENST00000528787 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
SSBP3-211ENST00000528787 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
SSBP3-211ENST00000528787 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
SSBP3-211ENST00000528787 TEX49A0A1B0GTD5 131 aa4.82□□□□□ -1.64
SSBP3-211ENST00000528787 TSPAN13O95857 204 aa4.82□□□□□ -1.64
SSBP3-211ENST00000528787 CRYGAP11844 174 aa4.82□□□□□ -1.64
SSBP3-211ENST00000528787 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
SSBP3-211ENST00000528787 F8WEM9 126 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 K7ERJ3 54 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 TRIAP1O43715 76 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 FABP2P12104 132 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 LAMTOR3Q9UHA4 124 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 DNAH8Q96JB1 4490 aa4.81□□□□□ -1.64
SSBP3-211ENST00000528787 RYR1P21817 5038 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 C9orf118A6NHY6 69 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 TRACP01848 142 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 SPRR4Q96PI1 79 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 Q9BRP9 147 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 ORMDL1Q9P0S3 153 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
SSBP3-211ENST00000528787 TMEM256-PLSCR3K7ERE1 68 aa4.79□□□□□ -1.64
SSBP3-211ENST00000528787 LINC00483Q53H64 154 aa4.79□□□□□ -1.64
SSBP3-211ENST00000528787 LINC01600Q96MT4 127 aa4.79□□□□□ -1.64
SSBP3-211ENST00000528787 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
SSBP3-211ENST00000528787 IGLV5-48A0A075B6I7 105 aa4.78□□□□□ -1.64
SSBP3-211ENST00000528787 SPRR1BP22528 89 aa4.78□□□□□ -1.64
SSBP3-211ENST00000528787 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
SSBP3-211ENST00000528787 Q6ZQY7 126 aa4.78□□□□□ -1.64
SSBP3-211ENST00000528787 SRRM2Q9UQ35 2752 aaKnown RBP4.78□□□□□ -1.64
SSBP3-211ENST00000528787 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
SSBP3-211ENST00000528787 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
SSBP3-211ENST00000528787 KRTAP29-1A8MX34 341 aaPredicted RBP4.77□□□□□ -1.65
SSBP3-211ENST00000528787 H3BUT2 72 aa4.77□□□□□ -1.65
SSBP3-211ENST00000528787 LST1O00453 97 aa4.77□□□□□ -1.65
SSBP3-211ENST00000528787 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
SSBP3-211ENST00000528787 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 C4orf48Q5BLP8 95 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 Q6JHZ5 121 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 SPAG11AQ6PDA7 123 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 GTF2H5Q6ZYL4 71 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 DEFB105AQ8NG35 78 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 TYMSOSQ8TAI1 123 aa4.76□□□□□ -1.65
SSBP3-211ENST00000528787 HSPG2P98160 4391 aa4.75□□□□□ -1.65
SSBP3-211ENST00000528787 J3QL48 77 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms