RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 WFDC9Q8NEX5 89 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 PPDPFLQ8WWR9 84 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 LINC00052Q96N35 136 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 NOTCH1P46531 2555 aa2.99□□□□□ -1.93
PCF11-202ENST00000528336 IGKCP01834 107 aa2.98□□□□□ -1.93
PCF11-202ENST00000528336 IAPPP10997 89 aa2.98□□□□□ -1.93
PCF11-202ENST00000528336 PDE6HQ13956 83 aa2.98□□□□□ -1.93
PCF11-202ENST00000528336 C9orf116Q5BN46 136 aaPredicted RBP2.98□□□□□ -1.93
PCF11-202ENST00000528336 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
PCF11-202ENST00000528336 NMES1Q9C002 83 aa2.98□□□□□ -1.93
PCF11-202ENST00000528336 hADV29S1A0JD25 119 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 SIX6O95475 246 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 CTSGP08311 255 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 UBE2G1P62253 170 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 C2orf82Q6UX34 121 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 Q6ZTI0 123 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 PPP1R1CQ8WVI7 109 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 PSENENQ9NZ42 101 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 MRPL36Q9P0J6 103 aaKnown RBP2.97□□□□□ -1.93
PCF11-202ENST00000528336 FBN3Q75N90 2809 aa2.97□□□□□ -1.93
PCF11-202ENST00000528336 C2orf70A6NJV1 201 aa2.96□□□□□ -1.94
PCF11-202ENST00000528336 ATOX1O00244 68 aa2.96□□□□□ -1.94
PCF11-202ENST00000528336 NDUFA4O00483 81 aa2.96□□□□□ -1.94
PCF11-202ENST00000528336 NUPR1O60356 82 aa2.96□□□□□ -1.94
PCF11-202ENST00000528336 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
PCF11-202ENST00000528336 S100A7L2Q5SY68 101 aa2.96□□□□□ -1.94
PCF11-202ENST00000528336 C20orf78Q9BR46 151 aa2.96□□□□□ -1.94
PCF11-202ENST00000528336 CFDP00746 253 aaPredicted RBP2.95□□□□□ -1.94
PCF11-202ENST00000528336 IGHV3-33P01772 117 aa2.95□□□□□ -1.94
PCF11-202ENST00000528336 TRGV9Q99603 122 aa2.95□□□□□ -1.94
PCF11-202ENST00000528336 LINC00474Q9P2X8 69 aa2.95□□□□□ -1.94
PCF11-202ENST00000528336 MEGF8Q7Z7M0 2845 aa2.95□□□□□ -1.94
PCF11-202ENST00000528336 HINT1P49773 126 aaPredicted RBP2.94□□□□□ -1.94
PCF11-202ENST00000528336 KRTDAPP60985 99 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 DEFB114Q30KQ6 69 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 Q5BKY6 102 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 ALKAL2Q6UX46 152 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 OR10AG1Q8NH19 301 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 UQCR10Q9UDW1 63 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 RABAC1Q9UI14 185 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 C22orf24Q9Y442 160 aa2.94□□□□□ -1.94
PCF11-202ENST00000528336 CMYA5Q8N3K9 4069 aa2.93□□□□□ -1.94
PCF11-202ENST00000528336 TRBV10-3A0A0K0K1G6 114 aa2.93□□□□□ -1.94
PCF11-202ENST00000528336 CYP2G1PQ6ZSU1 146 aa2.93□□□□□ -1.94
PCF11-202ENST00000528336 MGST2Q99735 147 aa2.93□□□□□ -1.94
PCF11-202ENST00000528336 RHPN1-AS1Q9BWJ2 59 aa2.93□□□□□ -1.94
PCF11-202ENST00000528336 CYP4F30PQ9H0H9 118 aa2.93□□□□□ -1.94
PCF11-202ENST00000528336 FXYD6-FXYD2A0A087WZ82 144 aa2.92□□□□□ -1.94
PCF11-202ENST00000528336 C1orf137Q5JT78 98 aa2.92□□□□□ -1.94
PCF11-202ENST00000528336 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
PCF11-202ENST00000528336 SORL1Q92673 2214 aa2.91□□□□□ -1.94
PCF11-202ENST00000528336 HCG22E2RYF7 251 aa2.91□□□□□ -1.94
PCF11-202ENST00000528336 C10orf113Q5VZT2 155 aa2.91□□□□□ -1.94
PCF11-202ENST00000528336 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
PCF11-202ENST00000528336 SERP2Q8N6R1 65 aa2.91□□□□□ -1.94
PCF11-202ENST00000528336 DNAH3Q8TD57 4116 aa2.9□□□□□ -1.94
PCF11-202ENST00000528336 TRAV13-2A0A0B4J235 113 aa2.9□□□□□ -1.95
PCF11-202ENST00000528336 H3BRN7 92 aa2.9□□□□□ -1.95
PCF11-202ENST00000528336 K7EIL1 84 aa2.9□□□□□ -1.95
PCF11-202ENST00000528336 RPL7L1Q6DKI1 246 aaKnown RBP2.9□□□□□ -1.95
PCF11-202ENST00000528336 PRKDCP78527 4128 aaKnown RBP2.89□□□□□ -1.95
PCF11-202ENST00000528336 IGKV3-7A0A075B6H7 116 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 KANTRA0A1W2PQU2 76 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 IGKV4-1P06312 121 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 SEC11AP67812 179 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 SERF2P84101 59 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 CMTM2Q8TAZ6 248 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 TIMM21Q9BVV7 248 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 TMEM14CQ9P0S9 112 aa2.89□□□□□ -1.95
PCF11-202ENST00000528336 H3BRM9 83 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 NDUFC1O43677 76 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 IGLC2P0DOY2 106 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 ELOBQ15370 118 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 PSMG4Q5JS54 123 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 LYPD5Q6UWN5 251 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 FAM167A-AS1Q96KT0 104 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 CYSTM1Q9H1C7 97 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 WFDC10AQ9H1F0 79 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 ST20Q9HBF5 79 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 SMCO4Q9NRQ5 59 aa2.88□□□□□ -1.95
PCF11-202ENST00000528336 UMAD1C9J7I0 102 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 APOC3P02656 99 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 DEFB131AP59861 70 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 DEFB121Q5J5C9 76 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 LINC00322Q6ZN03 302 aaPredicted RBP2.87□□□□□ -1.95
PCF11-202ENST00000528336 SPTSSBQ8NFR3 76 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 FAM213BQ8TBF2 198 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 STAB2Q8WWQ8 2551 aa2.87□□□□□ -1.95
PCF11-202ENST00000528336 A0A0G2JQZ4 141 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 A0A0J9YY99 117 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 TRBV10-1A0A0K0K1A3 114 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 CTXND1A0A1B0GTU2 59 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 ARL14EPLP0DKL9 152 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 CSAG1Q6PB30 78 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 LINC00304Q8N9R0 145 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 ODF3Q96PU9 254 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 TMEM167BQ9NRX6 74 aa2.86□□□□□ -1.95
PCF11-202ENST00000528336 NBEAL2Q6ZNJ1 2754 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms