RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNF815PA8K554 130 aa7.07□□□□□ -1.28
TRAPPC4-209ENST00000528230 B5MCH6 92 aa7.07□□□□□ -1.28
TRAPPC4-209ENST00000528230 TSPAN13O95857 204 aa7.07□□□□□ -1.28
TRAPPC4-209ENST00000528230 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC4-209ENST00000528230 NPC2P61916 151 aa7.06□□□□□ -1.28
TRAPPC4-209ENST00000528230 LINC00304Q8N9R0 145 aa7.06□□□□□ -1.28
TRAPPC4-209ENST00000528230 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
TRAPPC4-209ENST00000528230 CBY1Q9Y3M2 126 aa7.06□□□□□ -1.28
TRAPPC4-209ENST00000528230 PRR4Q16378 134 aa7.05□□□□□ -1.28
TRAPPC4-209ENST00000528230 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
TRAPPC4-209ENST00000528230 LRP2P98164 4655 aa7.04□□□□□ -1.28
TRAPPC4-209ENST00000528230 TRAV23DV6A0A075B6W5 121 aa7.04□□□□□ -1.28
TRAPPC4-209ENST00000528230 Q6ZRX8 168 aa7.04□□□□□ -1.28
TRAPPC4-209ENST00000528230 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 C3orf22Q8N5N4 141 aa7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 TTTY13Q9BZ97 58 aa7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
TRAPPC4-209ENST00000528230 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC4-209ENST00000528230 ANKRD39Q53RE8 183 aa7.02□□□□□ -1.29
TRAPPC4-209ENST00000528230 LINC00518Q8N0U6 118 aa7.02□□□□□ -1.29
TRAPPC4-209ENST00000528230 Q9BRP9 147 aa7.02□□□□□ -1.29
TRAPPC4-209ENST00000528230 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 HINT1P49773 126 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 HIST3H2BBQ8N257 126 aa7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 COPS9Q8WXC6 57 aa7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 PPDPFQ9H3Y8 114 aa7.01□□□□□ -1.29
TRAPPC4-209ENST00000528230 C5orf52A6NGY3 159 aa7□□□□□ -1.29
TRAPPC4-209ENST00000528230 S100A2P29034 98 aa7□□□□□ -1.29
TRAPPC4-209ENST00000528230 Q6ZVH6 145 aa7□□□□□ -1.29
TRAPPC4-209ENST00000528230 ATOH7Q8N100 152 aa7□□□□□ -1.29
TRAPPC4-209ENST00000528230 IFITM1P13164 125 aa6.99□□□□□ -1.29
TRAPPC4-209ENST00000528230 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
TRAPPC4-209ENST00000528230 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
TRAPPC4-209ENST00000528230 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
TRAPPC4-209ENST00000528230 S100A6P06703 90 aa6.97□□□□□ -1.29
TRAPPC4-209ENST00000528230 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
TRAPPC4-209ENST00000528230 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
TRAPPC4-209ENST00000528230 Q8NBF4 154 aa6.96□□□□□ -1.3
TRAPPC4-209ENST00000528230 LPAP08519 4548 aa6.96□□□□□ -1.3
TRAPPC4-209ENST00000528230 SPINK1P00995 79 aa6.95□□□□□ -1.3
TRAPPC4-209ENST00000528230 DHRS4-AS1Q9P1J3 65 aa6.95□□□□□ -1.3
TRAPPC4-209ENST00000528230 HSBP1L1C9JCN9 74 aa6.94□□□□□ -1.3
TRAPPC4-209ENST00000528230 MUSTN1Q8IVN3 82 aa6.94□□□□□ -1.3
TRAPPC4-209ENST00000528230 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
TRAPPC4-209ENST00000528230 TRBV7-6A0A0J9YX20 115 aa6.93□□□□□ -1.3
TRAPPC4-209ENST00000528230 COX7BP24311 80 aa6.93□□□□□ -1.3
TRAPPC4-209ENST00000528230 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
TRAPPC4-209ENST00000528230 MOBPQ13875 183 aa6.93□□□□□ -1.3
TRAPPC4-209ENST00000528230 IGLV7-46A0A075B6I9 117 aa6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 IGLV9-49A0A0B4J1Y8 123 aa6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 SPRR1BP22528 89 aa6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 C6orf99Q4VX62 202 aa6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 ST20-AS1Q8NBB2 130 aa6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
TRAPPC4-209ENST00000528230 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
TRAPPC4-209ENST00000528230 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC4-209ENST00000528230 TRAV13-2A0A0B4J235 113 aa6.9□□□□□ -1.3
TRAPPC4-209ENST00000528230 A6NDN8 102 aa6.9□□□□□ -1.3
TRAPPC4-209ENST00000528230 SLC25A34Q6PIV7 304 aa6.9□□□□□ -1.3
TRAPPC4-209ENST00000528230 A0A1B0GWB2 263 aa6.89□□□□□ -1.31
TRAPPC4-209ENST00000528230 A4D1N5 150 aa6.88□□□□□ -1.31
TRAPPC4-209ENST00000528230 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
TRAPPC4-209ENST00000528230 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
TRAPPC4-209ENST00000528230 LAMTOR3Q9UHA4 124 aa6.87□□□□□ -1.31
TRAPPC4-209ENST00000528230 TAL2Q16559 108 aa6.86□□□□□ -1.31
TRAPPC4-209ENST00000528230 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
TRAPPC4-209ENST00000528230 TEX49A0A1B0GTD5 131 aa6.85□□□□□ -1.31
TRAPPC4-209ENST00000528230 SLC25A20O43772 301 aa6.85□□□□□ -1.31
TRAPPC4-209ENST00000528230 Q8N377 158 aa6.85□□□□□ -1.31
TRAPPC4-209ENST00000528230 SMIM11BQ8TCY0 68 aa6.85□□□□□ -1.31
TRAPPC4-209ENST00000528230 DLEU1O43261 78 aa6.84□□□□□ -1.31
TRAPPC4-209ENST00000528230 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
TRAPPC4-209ENST00000528230 COX8AP10176 69 aa6.83□□□□□ -1.32
TRAPPC4-209ENST00000528230 VAMP3Q15836 100 aa6.83□□□□□ -1.32
TRAPPC4-209ENST00000528230 IGLV5-48A0A075B6I7 105 aa6.82□□□□□ -1.32
TRAPPC4-209ENST00000528230 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
TRAPPC4-209ENST00000528230 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
TRAPPC4-209ENST00000528230 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC4-209ENST00000528230 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
TRAPPC4-209ENST00000528230 CD164Q04900 197 aa6.8□□□□□ -1.32
TRAPPC4-209ENST00000528230 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
TRAPPC4-209ENST00000528230 HIST1H4GQ99525 98 aa6.8□□□□□ -1.32
TRAPPC4-209ENST00000528230 PRO1933Q9H354 126 aa6.8□□□□□ -1.32
TRAPPC4-209ENST00000528230 Q1RN00 199 aa6.79□□□□□ -1.32
TRAPPC4-209ENST00000528230 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
TRAPPC4-209ENST00000528230 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
TRAPPC4-209ENST00000528230 LINC00575Q6W349 94 aa6.78□□□□□ -1.32
TRAPPC4-209ENST00000528230 HIGD1BQ9P298 99 aa6.78□□□□□ -1.32
TRAPPC4-209ENST00000528230 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC4-209ENST00000528230 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
TRAPPC4-209ENST00000528230 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
TRAPPC4-209ENST00000528230 SPATA45Q537H7 98 aa6.76□□□□□ -1.33
TRAPPC4-209ENST00000528230 C14orf144Q96I85 54 aa6.76□□□□□ -1.33
TRAPPC4-209ENST00000528230 VAMP8Q9BV40 100 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms