RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 A0A0J9YXY3 114 aa6.08□□□□□ -1.44
CAPN1-210ENST00000527699 ACYP1P07311 99 aa6.08□□□□□ -1.44
CAPN1-210ENST00000527699 MALP21145 153 aa6.08□□□□□ -1.44
CAPN1-210ENST00000527699 MRPS36P82909 103 aaKnown RBP6.08□□□□□ -1.44
CAPN1-210ENST00000527699 RPL18AQ02543 176 aaKnown RBP6.08□□□□□ -1.44
CAPN1-210ENST00000527699 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
CAPN1-210ENST00000527699 LOC107984640A0A0U1RRK4 108 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 TINCRA0A1B0GVN0 87 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 H7C423 109 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 C1orf137Q5JT78 98 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 C2orf82Q6UX34 121 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 C5orf38Q86SI9 138 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 CAMK2N2Q96S95 79 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 CDC42SE2Q9NRR3 84 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
CAPN1-210ENST00000527699 TRAV13-1A0A0B4J241 112 aa6.06□□□□□ -1.44
CAPN1-210ENST00000527699 NDUFV3P56181 108 aaKnown RBP6.06□□□□□ -1.44
CAPN1-210ENST00000527699 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
CAPN1-210ENST00000527699 CD164L2Q6UWJ8 174 aa6.06□□□□□ -1.44
CAPN1-210ENST00000527699 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
CAPN1-210ENST00000527699 COX7A2LO14548 114 aa6.05□□□□□ -1.44
CAPN1-210ENST00000527699 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
CAPN1-210ENST00000527699 NDUFA12Q9UI09 145 aa6.05□□□□□ -1.44
CAPN1-210ENST00000527699 FAM168BA1KXE4 195 aa6.04□□□□□ -1.44
CAPN1-210ENST00000527699 H7C2G1 150 aa6.04□□□□□ -1.44
CAPN1-210ENST00000527699 LST1O00453 97 aa6.04□□□□□ -1.44
CAPN1-210ENST00000527699 TRIAP1O43715 76 aa6.04□□□□□ -1.44
CAPN1-210ENST00000527699 KRTAP11-1Q8IUC1 163 aa6.04□□□□□ -1.44
CAPN1-210ENST00000527699 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
CAPN1-210ENST00000527699 SPAG11BQ08648 103 aa6.03□□□□□ -1.44
CAPN1-210ENST00000527699 PKIGQ9Y2B9 76 aa6.03□□□□□ -1.44
CAPN1-210ENST00000527699 A0A087WZ39 114 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 TRBV7-7A0A0K0K1E9 115 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 NDUFA1O15239 70 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 PRSS2P07478 247 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 HERVK_113P63121 156 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
CAPN1-210ENST00000527699 LITAFQ99732 161 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 UBE2D4Q9Y2X8 147 aa6.02□□□□□ -1.45
CAPN1-210ENST00000527699 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
CAPN1-210ENST00000527699 TMEM126AQ9H061 195 aa6.01□□□□□ -1.45
CAPN1-210ENST00000527699 IGLV5-45A0A087WSX0 123 aa6□□□□□ -1.45
CAPN1-210ENST00000527699 TEX49A0A1B0GTD5 131 aa6□□□□□ -1.45
CAPN1-210ENST00000527699 IGLV7-43P04211 117 aa6□□□□□ -1.45
CAPN1-210ENST00000527699 HERV-K104P63124 156 aa6□□□□□ -1.45
CAPN1-210ENST00000527699 SS18L2Q9UHA2 77 aa6□□□□□ -1.45
CAPN1-210ENST00000527699 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
CAPN1-210ENST00000527699 B5MCH6 92 aa5.99□□□□□ -1.45
CAPN1-210ENST00000527699 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
CAPN1-210ENST00000527699 TRACP01848 142 aa5.99□□□□□ -1.45
CAPN1-210ENST00000527699 PRR4Q16378 134 aa5.99□□□□□ -1.45
CAPN1-210ENST00000527699 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
CAPN1-210ENST00000527699 FAM19A3Q7Z5A8 133 aa5.98□□□□□ -1.45
CAPN1-210ENST00000527699 DIRC1Q969H9 104 aa5.98□□□□□ -1.45
CAPN1-210ENST00000527699 C2orf48Q96LS8 159 aa5.98□□□□□ -1.45
CAPN1-210ENST00000527699 H0Y9J4 135 aa5.97□□□□□ -1.45
CAPN1-210ENST00000527699 CXCL5P42830 114 aa5.97□□□□□ -1.45
CAPN1-210ENST00000527699 UBE2BP63146 152 aa5.97□□□□□ -1.45
CAPN1-210ENST00000527699 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
CAPN1-210ENST00000527699 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
CAPN1-210ENST00000527699 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
CAPN1-210ENST00000527699 CSDC2Q9Y534 153 aaKnown RBP5.96□□□□□ -1.46
CAPN1-210ENST00000527699 TRAV13-2A0A0B4J235 113 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 DAND5Q8N907 189 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 CLEC2BQ92478 149 aa5.95□□□□□ -1.46
CAPN1-210ENST00000527699 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
CAPN1-210ENST00000527699 ADAMTSL4-AS1Q5T5F5 129 aa5.94□□□□□ -1.46
CAPN1-210ENST00000527699 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
CAPN1-210ENST00000527699 NPC2P61916 151 aa5.93□□□□□ -1.46
CAPN1-210ENST00000527699 CDKN2A-AS1Q9UH64 79 aa5.93□□□□□ -1.46
CAPN1-210ENST00000527699 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
CAPN1-210ENST00000527699 DNAL4O96015 105 aa5.92□□□□□ -1.46
CAPN1-210ENST00000527699 IGLV1-50A0A075B6I6 118 aa5.91□□□□□ -1.46
CAPN1-210ENST00000527699 FAM236AA0A1B0GUQ0 79 aa5.91□□□□□ -1.46
CAPN1-210ENST00000527699 FAM236BA0A1B0GV22 79 aa5.91□□□□□ -1.46
CAPN1-210ENST00000527699 ATOX1O00244 68 aa5.91□□□□□ -1.46
CAPN1-210ENST00000527699 UQCRQO14949 82 aa5.91□□□□□ -1.46
CAPN1-210ENST00000527699 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
CAPN1-210ENST00000527699 TOMM7Q9P0U1 55 aa5.91□□□□□ -1.46
CAPN1-210ENST00000527699 SMIM1B2RUZ4 78 aa5.9□□□□□ -1.46
CAPN1-210ENST00000527699 H0YGX0 51 aa5.9□□□□□ -1.46
CAPN1-210ENST00000527699 RPL28P46779 137 aaKnown RBP5.9□□□□□ -1.46
CAPN1-210ENST00000527699 KIAA0087Q14695 138 aa5.9□□□□□ -1.46
CAPN1-210ENST00000527699 LINC00242Q5T6M2 205 aa5.9□□□□□ -1.46
CAPN1-210ENST00000527699 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.46
CAPN1-210ENST00000527699 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.46
CAPN1-210ENST00000527699 BAALC-AS2P0C853 105 aa5.89□□□□□ -1.47
CAPN1-210ENST00000527699 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
CAPN1-210ENST00000527699 ZNF625Q96I27 306 aaPredicted RBP5.89□□□□□ -1.47
CAPN1-210ENST00000527699 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
CAPN1-210ENST00000527699 S100A7L2Q5SY68 101 aa5.88□□□□□ -1.47
CAPN1-210ENST00000527699 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
CAPN1-210ENST00000527699 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
CAPN1-210ENST00000527699 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
CAPN1-210ENST00000527699 F8WDY8 70 aa5.87□□□□□ -1.47
CAPN1-210ENST00000527699 A0A1B0GX51 115 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms