RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
LINC01001-202ENST00000527683 H7C2G1 150 aa3.81□□□□□ -1.8
LINC01001-202ENST00000527683 M0QXV9 152 aa3.81□□□□□ -1.8
LINC01001-202ENST00000527683 TCL1BO95988 128 aa3.81□□□□□ -1.8
LINC01001-202ENST00000527683 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
LINC01001-202ENST00000527683 Q6ZRN7 208 aaPredicted RBP3.81□□□□□ -1.8
LINC01001-202ENST00000527683 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
LINC01001-202ENST00000527683 HERC1Q15751 4861 aa3.8□□□□□ -1.8
LINC01001-202ENST00000527683 IGKV2D-24A0A075B6R9 120 aa3.8□□□□□ -1.8
LINC01001-202ENST00000527683 RPL28P46779 137 aaKnown RBP3.8□□□□□ -1.8
LINC01001-202ENST00000527683 TTC32Q5I0X7 151 aa3.8□□□□□ -1.8
LINC01001-202ENST00000527683 CAMK2N2Q96S95 79 aa3.8□□□□□ -1.8
LINC01001-202ENST00000527683 IGKV2-28A0A075B6P5 120 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 LST1O00453 97 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 IGKV2D-28P01615 120 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 SMR3BP02814 79 aaPredicted RBP3.79□□□□□ -1.8
LINC01001-202ENST00000527683 Q5VSD8 79 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 UNQ6190/PRO20217Q6UXQ8 127 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 LINC00337Q8N6G1 96 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 C15orf56Q8N910 161 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 CARD19Q96LW7 228 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 LINC01600Q96MT4 127 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
LINC01001-202ENST00000527683 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
LINC01001-202ENST00000527683 FAT1Q14517 4588 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 TRBV10-2A0A0K0K1G8 114 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 H3BT86 120 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 LINC01620Q4KN68 170 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 Q9HAA7 133 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 C6orf48Q9UBA6 75 aa3.78□□□□□ -1.8
LINC01001-202ENST00000527683 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.81
LINC01001-202ENST00000527683 A0A087WTM6 91 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 C9JAW5 83 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 H0YGX0 51 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 SLC25A20O43772 301 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 TRACP01848 142 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 SYCNQ0VAF6 134 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 WFDC2Q14508 124 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 HIGD2BQ4VC39 106 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 C9orf116Q5BN46 136 aaPredicted RBP3.77□□□□□ -1.81
LINC01001-202ENST00000527683 TEN1Q86WV5 123 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 OR13C6PQ8NH95 151 aa3.77□□□□□ -1.81
LINC01001-202ENST00000527683 A0A1B0GX51 115 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 ETDBQ3ZM63 59 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 Q6ZRU5 148 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 ANKRD29Q8N6D5 301 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 SMIM11BQ8TCY0 68 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 CLEC2BQ92478 149 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 LINC00526Q96FQ7 95 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 SS18L2Q9UHA2 77 aa3.76□□□□□ -1.81
LINC01001-202ENST00000527683 USP17L23D6RBM5 183 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 DNAL4O96015 105 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 C14orf177Q52M58 125 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 S100A7L2Q5SY68 101 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 MPLKIPQ8TAP9 179 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 PPDPFLQ8WWR9 84 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 ANAPC13Q9BS18 74 aa3.75□□□□□ -1.81
LINC01001-202ENST00000527683 NCR3O14931 201 aa3.74□□□□□ -1.81
LINC01001-202ENST00000527683 SNCGO76070 127 aa3.74□□□□□ -1.81
LINC01001-202ENST00000527683 HAMPP81172 84 aa3.74□□□□□ -1.81
LINC01001-202ENST00000527683 PKIGQ9Y2B9 76 aa3.74□□□□□ -1.81
LINC01001-202ENST00000527683 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
LINC01001-202ENST00000527683 LRCOL1A6NCL2 159 aa3.73□□□□□ -1.81
LINC01001-202ENST00000527683 PSCAO43653 123 aa3.73□□□□□ -1.81
LINC01001-202ENST00000527683 IGLV6-57P01721 117 aa3.73□□□□□ -1.81
LINC01001-202ENST00000527683 VPREB1P12018 145 aa3.73□□□□□ -1.81
LINC01001-202ENST00000527683 TRAV23DV6A0A075B6W5 121 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 LOC107984640A0A0U1RRK4 108 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 M0R378 163 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
LINC01001-202ENST00000527683 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
LINC01001-202ENST00000527683 Q6ZRP5 223 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 Q8NDZ9 215 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 DIRC1Q969H9 104 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 XAGE1AQ9HD64 81 aa3.72□□□□□ -1.81
LINC01001-202ENST00000527683 IGLV5-37A0A075B6J1 123 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 A0A087WYN8 130 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 H3BQ85 93 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 LECT2O14960 151 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 GAGE2EQ4V326 116 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 C6orf99Q4VX62 202 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 SERTAD4-AS1Q5TG53 156 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 SMIM20Q8N5G0 67 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 NKAPP1Q8N9T2 125 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 LINC00167Q96N53 147 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 GAGE2DQ9UEU5 116 aa3.71□□□□□ -1.82
LINC01001-202ENST00000527683 IGLV5-52A0A0A0MRZ9 124 aa3.7□□□□□ -1.82
LINC01001-202ENST00000527683 TRBV10-3A0A0K0K1G6 114 aa3.7□□□□□ -1.82
LINC01001-202ENST00000527683 BAALC-AS2P0C853 105 aa3.7□□□□□ -1.82
LINC01001-202ENST00000527683 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
LINC01001-202ENST00000527683 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
LINC01001-202ENST00000527683 ORMDL1Q9P0S3 153 aa3.7□□□□□ -1.82
LINC01001-202ENST00000527683 FAM240AA0A1B0GVK7 77 aa3.69□□□□□ -1.82
LINC01001-202ENST00000527683 ZNF73O43830 326 aaPredicted RBP3.69□□□□□ -1.82
LINC01001-202ENST00000527683 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms