RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 ABCA4P78363 2273 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 IGHV6-1A0A0B4J1U7 121 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 C19orf84I3L1E1 186 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 SYCNQ0VAF6 134 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 MOBPQ13875 183 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 C4orf26Q17RF5 130 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 ASB16-AS1Q495Z4 193 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 C1orf137Q5JT78 98 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 DEFB104AQ8WTQ1 72 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 ZNF706Q9Y5V0 76 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 APC2O95996 2303 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 BDP1A6H8Y1 2624 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 PLXNB1O43157 2135 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 ANKRD11Q6UB99 2663 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 GVINP1Q7Z2Y8 2422 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 CEP250Q9BV73 2442 aa1.58□□□□□ -2.16
ECHDC1-218ENST00000525745 DOPEY1Q5JWR5 2465 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 TRAV22A0A0B4J277 110 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 PSPHP1O15172 72 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 IGKV4-1P06312 121 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 SPRR1AP35321 89 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 PMAIP1Q13794 54 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 ATP11AUNQ6ZP68 121 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 C3orf56Q8N813 242 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 LINC00208Q96KT6 92 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 MYO15AQ9UKN7 3530 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 ADGRG4Q8IZF6 3080 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 CFAP54Q96N23 3096 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 WDFY3Q8IZQ1 3526 aa1.57□□□□□ -2.16
ECHDC1-218ENST00000525745 TNRC18O15417 2968 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 ROS1P08922 2347 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 PTPRQQ9UMZ3 2332 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 SPTBN2O15020 2390 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 EYSQ5T1H1 3165 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 EP300Q09472 2414 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 SPEGQ15772 3267 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 IGLV10-54A0A075B6I4 117 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 CLPSL2Q6UWE3 100 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 C10orf99Q6UWK7 81 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 KTN1-AS1Q86SY8 53 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 Q8NAQ8 132 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 WFDC9Q8NEX5 89 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 CIRBP-AS1Q8TBR5 109 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 B9D2Q9BPU9 175 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 TM2D3Q9BRN9 247 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 C8orf17Q9NRJ1 99 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 C6orf48Q9UBA6 75 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 LINC00588Q9Y4M8 146 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 SNURFQ9Y675 71 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 SPTBN5Q9NRC6 3674 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.56□□□□□ -2.166e-8■■■■□ 24.3
ECHDC1-218ENST00000525745 ZZEF1O43149 2961 aa1.56□□□□□ -2.16
ECHDC1-218ENST00000525745 CELSR3Q9NYQ7 3312 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 DOPEY2Q9Y3R5 2298 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 TTC28Q96AY4 2481 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 A0A096LPF7 62 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 TRAV10A0A0B4J240 114 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 A8MWP4 228 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 C8orf87E5RJ46 101 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 KRTAP10-10P60014 251 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 CNBPP62633 177 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 DEFB135Q30KP9 77 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 DEFB116Q30KQ4 102 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 UNQ6190/PRO20217Q6UXQ8 127 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 CASC2Q6XLA1 102 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 FP248Q71RG6 208 aaPredicted RBP1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 C15orf56Q8N910 161 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 WFDC11Q8NEX6 87 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 ZCCHC13Q8WW36 166 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 XAGE1AQ9HD64 81 aa1.55□□□□□ -2.16
ECHDC1-218ENST00000525745 FRYLO94915 3013 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 FRYQ5TBA9 3013 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 MUC6Q6W4X9 2439 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 IGLV1-50A0A075B6I6 118 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 DEFB131BA0A096LNP1 70 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 LOC101927531A0A1B0GV80 90 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 C16orf90A8MZG2 172 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 C3orf84H3BNL1 204 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 PSCAO43653 123 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 SPRR1BP22528 89 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 PHF5AQ7RTV0 110 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 C1orf64Q8NEQ6 169 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 CYSTM1Q9H1C7 97 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 WFDC10AQ9H1F0 79 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 ZNF292O60281 2723 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 PRRC2CQ9Y520 2896 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 CFAP47Q6ZTR5 3102 aa1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 SPTBN1Q01082 2364 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 SPTAN1Q13813 2472 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-218ENST00000525745 CEP295Q9C0D2 2601 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 A6NED7 52 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 H0Y9P7 68 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 LOC400499M0QZD8 3231 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 COL6A3P12111 3177 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 HTN3P15516 51 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 MUC3AQ02505 3323 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 LUZP6Q538Z0 58 aa1.53□□□□□ -2.16
ECHDC1-218ENST00000525745 LINC00483Q53H64 154 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms