RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 NDUFC1O43677 76 aa2.3□□□□□ -2.04
NPM1-212ENST00000524204 EFNA4P52798 201 aa2.3□□□□□ -2.04
NPM1-212ENST00000524204 TRBV7-3A0A075B6L6 115 aa2.29□□□□□ -2.04
NPM1-212ENST00000524204 FAUP35544 74 aaKnown RBP2.29□□□□□ -2.04
NPM1-212ENST00000524204 FXYD4P59646 89 aa2.29□□□□□ -2.04
NPM1-212ENST00000524204 NPVFQ9HCQ7 196 aa2.29□□□□□ -2.04
NPM1-212ENST00000524204 MANBALQ9NQG1 85 aa2.29□□□□□ -2.04
NPM1-212ENST00000524204 UQCR10Q9UDW1 63 aa2.29□□□□□ -2.04
NPM1-212ENST00000524204 ARFGEF3Q5TH69 2177 aa2.29□□□□□ -2.04
NPM1-212ENST00000524204 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 IGKV3D-7A0A0C4DH55 119 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 IGKV3OR2-268A0A0C4DH90 116 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 SFT2D2O95562 160 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 ELOF1P60002 83 aaKnown RBP2.28□□□□□ -2.04
NPM1-212ENST00000524204 KRTAP10-10P60014 251 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 XAF1Q6GPH4 301 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 UNQ6190/PRO20217Q6UXQ8 127 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 FAM213BQ8TBF2 198 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 TENM2Q9NT68 2774 aa2.28□□□□□ -2.04
NPM1-212ENST00000524204 HERC2O95714 4834 aa2.28□□□□□ -2.05
NPM1-212ENST00000524204 STAB2Q8WWQ8 2551 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
NPM1-212ENST00000524204 CCL3L1P16619 93 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 FXYD3Q14802 87 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 ZNF56Q15929 161 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 ZNF563Q8TA94 476 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 COX7B2Q8TF08 81 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 BPESC1Q9GZL8 116 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 CYSTM1Q9H1C7 97 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 HYDINQ4G0P3 5121 aa2.27□□□□□ -2.05
NPM1-212ENST00000524204 IGKV2-40A0A087WW87 121 aaPredicted RBP2.26□□□□□ -2.05
NPM1-212ENST00000524204 TRBV7-7A0A0K0K1E9 115 aa2.26□□□□□ -2.05
NPM1-212ENST00000524204 IGKV2D-40P01614 121 aaPredicted RBP2.26□□□□□ -2.05
NPM1-212ENST00000524204 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
NPM1-212ENST00000524204 FAM167A-AS1Q96KT0 104 aa2.26□□□□□ -2.05
NPM1-212ENST00000524204 TRGV9Q99603 122 aa2.26□□□□□ -2.05
NPM1-212ENST00000524204 PRO1854Q9UHT4 67 aa2.26□□□□□ -2.05
NPM1-212ENST00000524204 RYR1P21817 5038 aa2.26□□□□□ -2.05
NPM1-212ENST00000524204 EXPH5Q8NEV8 1989 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 NBDYA0A0U1RRE5 68 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 FXYD1O00168 92 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 COX6CP09669 75 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 EDDM3BP56851 147 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 PEA15Q15121 130 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 SERP2Q8N6R1 65 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 OBSCN-AS1Q96MR7 158 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 DYNLRB1Q9NP97 96 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 LENEPQ9Y5L5 61 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 WNK2Q9Y3S1 2297 aa2.25□□□□□ -2.05
NPM1-212ENST00000524204 COL7A1Q02388 2944 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 CHKB-CPT1BH3BT56 60 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 K7EP34 96 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 CYB5AP00167 134 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 C5orf56Q8N8D9 126 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 CACFD1Q9UGQ2 172 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 V9GYV3 84 aa2.24□□□□□ -2.05
NPM1-212ENST00000524204 UQCRHLA0A096LP55 91 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 PPP1R17O96001 155 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 APOC3P02656 99 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 TRAPPC2P0DI81 140 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 TRAPPC2BP0DI82 140 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 Q6ZQY7 126 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 PCLOQ9Y6V0 5065 aa2.23□□□□□ -2.05
NPM1-212ENST00000524204 CLPSL1A2RUU4 121 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 PIN1P1O15428 100 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 IFI6P09912 130 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 CAV3P56539 151 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 UBE2D3P61077 147 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 UBE2D2P62837 147 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 SPAG11BQ08648 103 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 SPAG11AQ6PDA7 123 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 Q8N6K4 173 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 DEFB108BQ8NET1 73 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 R4GMQ9 66 aa2.22□□□□□ -2.05
NPM1-212ENST00000524204 KLKP1Q107X0 134 aa2.21□□□□□ -2.06
NPM1-212ENST00000524204 S100A16Q96FQ6 103 aaKnown RBP2.21□□□□□ -2.06
NPM1-212ENST00000524204 LINC00208Q96KT6 92 aa2.21□□□□□ -2.06
NPM1-212ENST00000524204 S100A13Q99584 98 aa2.21□□□□□ -2.06
NPM1-212ENST00000524204 NDUFA4L2Q9NRX3 87 aa2.21□□□□□ -2.06
NPM1-212ENST00000524204 HUWE1Q7Z6Z7 4374 aaKnown RBP2.2□□□□□ -2.06
NPM1-212ENST00000524204 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 LYNX1G3V0Z9 82 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 H3BQF6 201 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 SYS1-DBNDD2H3BUS1 97 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 LYNX1P0DP58 116 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 TMEM170BQ5T4T1 132 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 WFDC9Q8NEX5 89 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 NXT2Q9NPJ8 142 aaKnown RBP2.2□□□□□ -2.06
NPM1-212ENST00000524204 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 RABAC1Q9UI14 185 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 V9GYH0 126 aa2.2□□□□□ -2.06
NPM1-212ENST00000524204 LYSTQ99698 3801 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 K7EIL1 84 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 HMGN4O00479 90 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 PCOTHQ58A44 107 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 Q5VV11 94 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 Q86TA4 180 aa2.19□□□□□ -2.06
NPM1-212ENST00000524204 C20orf78Q9BR46 151 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms