RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 Q1RN00 199 aa8.21□□□□□ -1.1
CPNE3-205ENST00000522240 DPH3Q96FX2 82 aa8.21□□□□□ -1.1
CPNE3-205ENST00000522240 LINC00167Q96N53 147 aa8.21□□□□□ -1.1
CPNE3-205ENST00000522240 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
CPNE3-205ENST00000522240 DNAH8Q96JB1 4490 aa8.21□□□□□ -1.1
CPNE3-205ENST00000522240 IGLV1-50A0A075B6I6 118 aa8.2□□□□□ -1.1
CPNE3-205ENST00000522240 TRAV23DV6A0A075B6W5 121 aa8.2□□□□□ -1.1
CPNE3-205ENST00000522240 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
CPNE3-205ENST00000522240 B5MCH6 92 aa8.2□□□□□ -1.1
CPNE3-205ENST00000522240 PRYO14603 147 aa8.2□□□□□ -1.1
CPNE3-205ENST00000522240 H7C2G1 150 aa8.19□□□□□ -1.1
CPNE3-205ENST00000522240 RPL28P46779 137 aaKnown RBP8.19□□□□□ -1.1
CPNE3-205ENST00000522240 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
CPNE3-205ENST00000522240 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
CPNE3-205ENST00000522240 SMIM11BQ8TCY0 68 aa8.19□□□□□ -1.1
CPNE3-205ENST00000522240 KCNQ1DNQ9H478 68 aa8.19□□□□□ -1.1
CPNE3-205ENST00000522240 UBE2BP63146 152 aa8.17□□□□□ -1.1
CPNE3-205ENST00000522240 CIRBP-AS1Q8TBR5 109 aa8.17□□□□□ -1.1
CPNE3-205ENST00000522240 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
CPNE3-205ENST00000522240 TRIAP1O43715 76 aa8.16□□□□□ -1.1
CPNE3-205ENST00000522240 ZNF73O43830 326 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-205ENST00000522240 DYNC1H1Q14204 4646 aaKnown RBP8.16□□□□□ -1.1
CPNE3-205ENST00000522240 LYRM7Q5U5X0 104 aa8.16□□□□□ -1.1
CPNE3-205ENST00000522240 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
CPNE3-205ENST00000522240 RPL37AP8A6NKH3 93 aa8.15□□□□□ -1.1
CPNE3-205ENST00000522240 H3BUT2 72 aa8.15□□□□□ -1.1
CPNE3-205ENST00000522240 SPRR1AP35321 89 aa8.15□□□□□ -1.1
CPNE3-205ENST00000522240 PSMB2P49721 201 aa8.15□□□□□ -1.1
CPNE3-205ENST00000522240 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
CPNE3-205ENST00000522240 COX6CP09669 75 aa8.14□□□□□ -1.11
CPNE3-205ENST00000522240 C6orf99Q4VX62 202 aa8.14□□□□□ -1.11
CPNE3-205ENST00000522240 LRP1BQ9NZR2 4599 aa8.13□□□□□ -1.11
CPNE3-205ENST00000522240 A0A1W2PPM0 123 aa8.13□□□□□ -1.11
CPNE3-205ENST00000522240 REG3GQ6UW15 175 aa8.13□□□□□ -1.11
CPNE3-205ENST00000522240 NAA38Q9BRA0 125 aaKnown RBP8.13□□□□□ -1.11
CPNE3-205ENST00000522240 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
CPNE3-205ENST00000522240 H0YGX0 51 aa8.11□□□□□ -1.11
CPNE3-205ENST00000522240 FABP2P12104 132 aa8.11□□□□□ -1.11
CPNE3-205ENST00000522240 ELOF1P60002 83 aaKnown RBP8.11□□□□□ -1.11
CPNE3-205ENST00000522240 VAMP3Q15836 100 aa8.11□□□□□ -1.11
CPNE3-205ENST00000522240 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
CPNE3-205ENST00000522240 ETDCA0A1B0GVM5 59 aa8.1□□□□□ -1.11
CPNE3-205ENST00000522240 COX7BP24311 80 aa8.1□□□□□ -1.11
CPNE3-205ENST00000522240 BCE1O60756 84 aa8.09□□□□□ -1.11
CPNE3-205ENST00000522240 SCGB1C2P0DMR2 95 aa8.09□□□□□ -1.11
CPNE3-205ENST00000522240 XGP55808 180 aa8.09□□□□□ -1.11
CPNE3-205ENST00000522240 HAMPP81172 84 aa8.09□□□□□ -1.11
CPNE3-205ENST00000522240 HSPG2P98160 4391 aa8.09□□□□□ -1.11
CPNE3-205ENST00000522240 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
CPNE3-205ENST00000522240 A0A1B0GX51 115 aa8.08□□□□□ -1.12
CPNE3-205ENST00000522240 Q6ZRX8 168 aa8.08□□□□□ -1.12
CPNE3-205ENST00000522240 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
CPNE3-205ENST00000522240 H0Y9J4 135 aa8.07□□□□□ -1.12
CPNE3-205ENST00000522240 KRTAP4-5Q9BYR2 181 aa8.07□□□□□ -1.12
CPNE3-205ENST00000522240 LST1O00453 97 aa8.06□□□□□ -1.12
CPNE3-205ENST00000522240 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
CPNE3-205ENST00000522240 FAM19A1Q7Z5A9 133 aa8.06□□□□□ -1.12
CPNE3-205ENST00000522240 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
CPNE3-205ENST00000522240 SPCS1Q9Y6A9 102 aa8.06□□□□□ -1.12
CPNE3-205ENST00000522240 TCL1BO95988 128 aa8.05□□□□□ -1.12
CPNE3-205ENST00000522240 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
CPNE3-205ENST00000522240 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
CPNE3-205ENST00000522240 LINC00575Q6W349 94 aa8.05□□□□□ -1.12
CPNE3-205ENST00000522240 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
CPNE3-205ENST00000522240 K7EP34 96 aa8.04□□□□□ -1.12
CPNE3-205ENST00000522240 SLC25A20O43772 301 aa8.04□□□□□ -1.12
CPNE3-205ENST00000522240 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
CPNE3-205ENST00000522240 KRTAP13-1Q8IUC0 172 aa8.04□□□□□ -1.12
CPNE3-205ENST00000522240 FAM218AQ96MZ4 157 aa8.04□□□□□ -1.12
CPNE3-205ENST00000522240 APOBP04114 4563 aaKnown RBP8.04□□□□□ -1.12
CPNE3-205ENST00000522240 SNCGO76070 127 aa8.03□□□□□ -1.12
CPNE3-205ENST00000522240 TRACP01848 142 aa8.03□□□□□ -1.12
CPNE3-205ENST00000522240 UBE2AP49459 152 aa8.03□□□□□ -1.12
CPNE3-205ENST00000522240 A0A1B0GV90 55 aa8.02□□□□□ -1.13
CPNE3-205ENST00000522240 hADV29S1A0JD25 119 aa8.02□□□□□ -1.13
CPNE3-205ENST00000522240 PRLHP81277 87 aa8.02□□□□□ -1.13
CPNE3-205ENST00000522240 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
CPNE3-205ENST00000522240 Q9BRP9 147 aa8.02□□□□□ -1.13
CPNE3-205ENST00000522240 DNAL4O96015 105 aa8□□□□□ -1.13
CPNE3-205ENST00000522240 IGLV7-43P04211 117 aa8□□□□□ -1.13
CPNE3-205ENST00000522240 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
CPNE3-205ENST00000522240 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
CPNE3-205ENST00000522240 ZNF861PO60384 105 aa7.99□□□□□ -1.13
CPNE3-205ENST00000522240 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
CPNE3-205ENST00000522240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.99□□□□□ -1.13
CPNE3-205ENST00000522240 H3BMG7 143 aa7.98□□□□□ -1.13
CPNE3-205ENST00000522240 Q8N1X5 172 aa7.98□□□□□ -1.13
CPNE3-205ENST00000522240 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
CPNE3-205ENST00000522240 OCIAD2Q56VL3 154 aa7.97□□□□□ -1.13
CPNE3-205ENST00000522240 Q6ZQY7 126 aa7.97□□□□□ -1.13
CPNE3-205ENST00000522240 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.14
CPNE3-205ENST00000522240 H3BQ85 93 aa7.95□□□□□ -1.14
CPNE3-205ENST00000522240 ERC2-IT1O76042 136 aa7.95□□□□□ -1.14
CPNE3-205ENST00000522240 ORMDL1Q9P0S3 153 aa7.95□□□□□ -1.14
CPNE3-205ENST00000522240 HERC1Q15751 4861 aa7.95□□□□□ -1.14
CPNE3-205ENST00000522240 C9JAW5 83 aa7.94□□□□□ -1.14
CPNE3-205ENST00000522240 H3BT86 120 aa7.94□□□□□ -1.14
CPNE3-205ENST00000522240 UBE2V1Q13404 147 aa7.94□□□□□ -1.14
CPNE3-205ENST00000522240 PPDPFLQ8WWR9 84 aa7.94□□□□□ -1.14
CPNE3-205ENST00000522240 IGLV5-48A0A075B6I7 105 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms