RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SMIM29Q86T20 159 aa8.52□□□□□ -1.04
TRAPPC9-208ENST00000520857 IGKV4-1P06312 121 aa8.52□□□□□ -1.05
TRAPPC9-208ENST00000520857 KPRPQ5T749 579 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC9-208ENST00000520857 UBE2BP63146 152 aa8.51□□□□□ -1.05
TRAPPC9-208ENST00000520857 SYCNQ0VAF6 134 aa8.51□□□□□ -1.05
TRAPPC9-208ENST00000520857 ESRGQ1W209 222 aa8.51□□□□□ -1.05
TRAPPC9-208ENST00000520857 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
TRAPPC9-208ENST00000520857 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
TRAPPC9-208ENST00000520857 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-208ENST00000520857 VWFP04275 2813 aa8.5□□□□□ -1.05
TRAPPC9-208ENST00000520857 Q8NAQ8 132 aa8.5□□□□□ -1.05
TRAPPC9-208ENST00000520857 KRTAP10-3P60369 221 aa8.49□□□□□ -1.05
TRAPPC9-208ENST00000520857 FAM229BQ4G0N7 80 aa8.49□□□□□ -1.05
TRAPPC9-208ENST00000520857 Q6ZRP5 223 aa8.49□□□□□ -1.05
TRAPPC9-208ENST00000520857 RETNQ9HD89 108 aa8.49□□□□□ -1.05
TRAPPC9-208ENST00000520857 HELZ2Q9BYK8 2649 aaKnown RBP8.48□□□□□ -1.05
TRAPPC9-208ENST00000520857 C1orf137Q5JT78 98 aa8.48□□□□□ -1.05
TRAPPC9-208ENST00000520857 C1orf195Q5TG92 126 aa8.48□□□□□ -1.05
TRAPPC9-208ENST00000520857 BAHCC1Q9P281 2608 aa8.46□□□□□ -1.05
TRAPPC9-208ENST00000520857 C7orf33Q8WU49 177 aa8.46□□□□□ -1.05
TRAPPC9-208ENST00000520857 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
TRAPPC9-208ENST00000520857 OCR1Q9BZK8 76 aa8.45□□□□□ -1.06
TRAPPC9-208ENST00000520857 HIVEP1P15822 2718 aa8.45□□□□□ -1.06
TRAPPC9-208ENST00000520857 Q6ZTC4 211 aa8.45□□□□□ -1.06
TRAPPC9-208ENST00000520857 EPM2AB3EWF7 344 aa8.44□□□□□ -1.06
TRAPPC9-208ENST00000520857 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
TRAPPC9-208ENST00000520857 PSPHP1O15172 72 aa8.44□□□□□ -1.06
TRAPPC9-208ENST00000520857 WFDC13Q8IUB5 93 aa8.44□□□□□ -1.06
TRAPPC9-208ENST00000520857 Q8N377 158 aa8.44□□□□□ -1.06
TRAPPC9-208ENST00000520857 SERTAD4-AS1Q5TG53 156 aa8.43□□□□□ -1.06
TRAPPC9-208ENST00000520857 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
TRAPPC9-208ENST00000520857 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
TRAPPC9-208ENST00000520857 KRTAP1-1Q07627 177 aa8.42□□□□□ -1.06
TRAPPC9-208ENST00000520857 DHRS4-AS1Q9P1J3 65 aa8.42□□□□□ -1.06
TRAPPC9-208ENST00000520857 AKAP9Q99996 3911 aa8.41□□□□□ -1.06
TRAPPC9-208ENST00000520857 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
TRAPPC9-208ENST00000520857 V9GYY9 64 aa8.41□□□□□ -1.06
TRAPPC9-208ENST00000520857 ZNF469Q96JG9 3925 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC9-208ENST00000520857 A0A0G2JQZ4 141 aa8.4□□□□□ -1.06
TRAPPC9-208ENST00000520857 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
TRAPPC9-208ENST00000520857 FAM168BA1KXE4 195 aa8.4□□□□□ -1.07
TRAPPC9-208ENST00000520857 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
TRAPPC9-208ENST00000520857 INAFM1C9JVW0 142 aa8.39□□□□□ -1.07
TRAPPC9-208ENST00000520857 K7EQZ3 153 aa8.39□□□□□ -1.07
TRAPPC9-208ENST00000520857 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
TRAPPC9-208ENST00000520857 DEFB131BA0A096LNP1 70 aa8.38□□□□□ -1.07
TRAPPC9-208ENST00000520857 MP68P56378 58 aa8.38□□□□□ -1.07
TRAPPC9-208ENST00000520857 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
TRAPPC9-208ENST00000520857 Q6ZRX8 168 aa8.37□□□□□ -1.07
TRAPPC9-208ENST00000520857 Q8NBF4 154 aa8.37□□□□□ -1.07
TRAPPC9-208ENST00000520857 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
TRAPPC9-208ENST00000520857 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
TRAPPC9-208ENST00000520857 IGKV2-24A0A0C4DH68 120 aa8.36□□□□□ -1.07
TRAPPC9-208ENST00000520857 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
TRAPPC9-208ENST00000520857 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
TRAPPC9-208ENST00000520857 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
TRAPPC9-208ENST00000520857 A0A096LNI7 61 aa8.33□□□□□ -1.08
TRAPPC9-208ENST00000520857 HCG22E2RYF7 251 aa8.33□□□□□ -1.08
TRAPPC9-208ENST00000520857 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
TRAPPC9-208ENST00000520857 PSCAO43653 123 aa8.33□□□□□ -1.08
TRAPPC9-208ENST00000520857 FLNBO75369 2602 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-208ENST00000520857 A0A087WSZ3 146 aa8.33□□□□□ -1.08
TRAPPC9-208ENST00000520857 C11orf45Q8TAV5 145 aa8.32□□□□□ -1.08
TRAPPC9-208ENST00000520857 Q9BRP9 147 aa8.32□□□□□ -1.08
TRAPPC9-208ENST00000520857 MAST4O15021 2626 aa8.32□□□□□ -1.08
TRAPPC9-208ENST00000520857 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-208ENST00000520857 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
TRAPPC9-208ENST00000520857 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-208ENST00000520857 PRLHP81277 87 aa8.3□□□□□ -1.08
TRAPPC9-208ENST00000520857 LINC00476Q8WZB0 136 aa8.3□□□□□ -1.08
TRAPPC9-208ENST00000520857 PDZD2O15018 2839 aa8.3□□□□□ -1.08
TRAPPC9-208ENST00000520857 DSCR10P59022 87 aa8.3□□□□□ -1.08
TRAPPC9-208ENST00000520857 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
TRAPPC9-208ENST00000520857 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
TRAPPC9-208ENST00000520857 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
TRAPPC9-208ENST00000520857 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
TRAPPC9-208ENST00000520857 COL6A5A8TX70 2615 aa8.27□□□□□ -1.09
TRAPPC9-208ENST00000520857 CASC10Q5T4H9 136 aa8.27□□□□□ -1.09
TRAPPC9-208ENST00000520857 REG3GQ6UW15 175 aa8.27□□□□□ -1.09
TRAPPC9-208ENST00000520857 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
TRAPPC9-208ENST00000520857 A8MUN3 132 aa8.26□□□□□ -1.09
TRAPPC9-208ENST00000520857 NDUFB1O75438 58 aa8.26□□□□□ -1.09
TRAPPC9-208ENST00000520857 UBE2AP49459 152 aa8.26□□□□□ -1.09
TRAPPC9-208ENST00000520857 SEC61GP60059 68 aa8.26□□□□□ -1.09
TRAPPC9-208ENST00000520857 SPTSSBQ8NFR3 76 aa8.26□□□□□ -1.09
TRAPPC9-208ENST00000520857 TENM3Q9P273 2699 aa8.25□□□□□ -1.09
TRAPPC9-208ENST00000520857 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
TRAPPC9-208ENST00000520857 H0Y9J4 135 aa8.25□□□□□ -1.09
TRAPPC9-208ENST00000520857 NSD1Q96L73 2696 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC9-208ENST00000520857 A0A1B0GW54 56 aa8.24□□□□□ -1.09
TRAPPC9-208ENST00000520857 CHKB-CPT1BH3BT56 60 aa8.24□□□□□ -1.09
TRAPPC9-208ENST00000520857 J3QKU1 62 aa8.24□□□□□ -1.09
TRAPPC9-208ENST00000520857 NBEAL1Q6ZS30 2694 aa8.24□□□□□ -1.09
TRAPPC9-208ENST00000520857 H3BNG1 76 aa8.23□□□□□ -1.09
TRAPPC9-208ENST00000520857 B9D2Q9BPU9 175 aa8.23□□□□□ -1.09
TRAPPC9-208ENST00000520857 H0Y9P7 68 aa8.23□□□□□ -1.09
TRAPPC9-208ENST00000520857 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
TRAPPC9-208ENST00000520857 F8WDY8 70 aa8.22□□□□□ -1.09
TRAPPC9-208ENST00000520857 IGFL1Q6UW32 110 aa8.22□□□□□ -1.09
TRAPPC9-208ENST00000520857 CASC2Q6XLA1 102 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms