RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KNTC1P50748 2209 aa1.16□□□□□ -2.22
SQLE-204ENST00000520493 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.22
SQLE-204ENST00000520493 APC2O95996 2303 aa1.15□□□□□ -2.23
SQLE-204ENST00000520493 SPINT3P49223 89 aa1.15□□□□□ -2.23
SQLE-204ENST00000520493 TANC1Q9C0D5 1861 aa1.15□□□□□ -2.23
SQLE-204ENST00000520493 CACNA1EQ15878 2313 aa1.15□□□□□ -2.23
SQLE-204ENST00000520493 TRBV7-3A0A075B6L6 115 aa1.14□□□□□ -2.23
SQLE-204ENST00000520493 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.14□□□□□ -2.23
SQLE-204ENST00000520493 MGST2Q99735 147 aa1.14□□□□□ -2.23
SQLE-204ENST00000520493 USH2AO75445 5202 aa1.14□□□□□ -2.23
SQLE-204ENST00000520493 PSME4Q14997 1843 aa1.14□□□□□ -2.23
SQLE-204ENST00000520493 RGPD3A6NKT7 1758 aaPredicted RBP1.13□□□□□ -2.23
SQLE-204ENST00000520493 RGPD4Q7Z3J3 1758 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 PI4KAP42356 2102 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 ANK2Q01484 3957 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 A0A0G2JND7 137 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 F2Z2F3 143 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 CCL18P55774 89 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 Q5VV11 94 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 DEFB106AQ8N104 65 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 BPESC1Q9GZL8 116 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 LINC00474Q9P2X8 69 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 Q9Y3F1 56 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 PRKDCP78527 4128 aaKnown RBP1.13□□□□□ -2.23
SQLE-204ENST00000520493 SSC5DA1L4H1 1573 aa1.13□□□□□ -2.23
SQLE-204ENST00000520493 PPP1R17O96001 155 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 ZNF137PP52743 207 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 NCBP2-AS2Q69YL0 99 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 VMO1Q7Z5L0 202 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 SMIM11BQ8TCY0 68 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 Q9H521 79 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 R4GMQ9 66 aa1.12□□□□□ -2.23
SQLE-204ENST00000520493 TRGV1A0A0A0MS02 117 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 SMIM31A0A1B0GVY4 71 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 M0R143 59 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 ACYP2P14621 99 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 BAGE3Q86Y29 109 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 DEFB107AQ8IZN7 70 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 NDUFA4L2Q9NRX3 87 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 AP4S1Q9Y587 144 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 A0A0G2JMZ2 1700 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 DOCK11Q5JSL3 2073 aa1.11□□□□□ -2.23
SQLE-204ENST00000520493 F5P12259 2224 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 A0A087WXM4 84 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 GVQW2A0A096LPI5 108 aaPredicted RBP1.1□□□□□ -2.23
SQLE-204ENST00000520493 LOC285095A0A1B0GVY8 99 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 NAP1L6A6NFF2 107 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 TMEM14DPA8MWL7 114 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 CD52P31358 61 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 SPAG11BQ08648 103 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 SPAG11AQ6PDA7 123 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 TSLPQ969D9 159 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 DYNLRB1Q9NP97 96 aa1.1□□□□□ -2.23
SQLE-204ENST00000520493 LRRC37A2A6NM11 1700 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 PAPPA2Q9BXP8 1791 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 DNAH1Q9P2D7 4330 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 LINC00032P0C843 101 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 S100A10P60903 97 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 C6orf52Q5T4I8 152 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 FAM167A-AS1Q96KT0 104 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 PLXNB2O15031 1838 aa1.09□□□□□ -2.23
SQLE-204ENST00000520493 TSC2P49815 1807 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 ZNF236Q9UL36 1845 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 PDCD11Q14690 1871 aaKnown RBP1.08□□□□□ -2.24
SQLE-204ENST00000520493 CCL22O00626 93 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 GNGT2O14610 69 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 S100A3P33764 101 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 KRTDAPP60985 99 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 DPY30Q9C005 99 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 SACSQ9NZJ4 4579 aa1.08□□□□□ -2.24
SQLE-204ENST00000520493 PKHD1P08F94 4074 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 TRAV1-2A0A0B4J238 106 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 LOC730098B7Z3J9 87 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 HMGA1P17096 107 aaKnown RBP1.07□□□□□ -2.24
SQLE-204ENST00000520493 SNCAP37840 140 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 SMIM11AP58511 58 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 RPL38P63173 70 aaKnown RBP1.07□□□□□ -2.24
SQLE-204ENST00000520493 NCMAPQ5T1S8 102 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 RPS27LQ71UM5 84 aaKnown RBP1.07□□□□□ -2.24
SQLE-204ENST00000520493 S100ZQ8WXG8 99 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 AMELXQ99217 191 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 PRR15LQ9BU68 103 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 V9GYH0 126 aa1.07□□□□□ -2.24
SQLE-204ENST00000520493 MYCBP2O75592 4640 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 A0A0D9SG42 100 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 M0R135 149 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 PKIAP61925 76 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 Q6ZRX8 168 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 FAIMQ9NVQ4 179 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 UQCR10Q9UDW1 63 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 HECTD4Q9Y4D8 3996 aa1.06□□□□□ -2.24
SQLE-204ENST00000520493 DYNC2H1Q8NCM8 4307 aaKnown RBP1.06□□□□□ -2.24
SQLE-204ENST00000520493 ANKRD36A6QL64 1941 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 HMGN4O00479 90 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 MPC2O95563 127 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 UBE2D3P61077 147 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 SNRPGP62308 76 aaKnown RBP1.05□□□□□ -2.24
SQLE-204ENST00000520493 UBE2D2P62837 147 aa1.05□□□□□ -2.24
SQLE-204ENST00000520493 LELP1Q5T871 98 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms