RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 IGKV2D-28P01615 120 aa8.04□□□□□ -1.12
PABPC1-205ENST00000518196 TAL2Q16559 108 aa8.04□□□□□ -1.12
PABPC1-205ENST00000518196 PRO1933Q9H354 126 aa8.04□□□□□ -1.12
PABPC1-205ENST00000518196 DDTP30046 118 aa8.03□□□□□ -1.12
PABPC1-205ENST00000518196 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
PABPC1-205ENST00000518196 KRTAP11-1Q8IUC1 163 aa8.03□□□□□ -1.12
PABPC1-205ENST00000518196 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
PABPC1-205ENST00000518196 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
PABPC1-205ENST00000518196 CBY1Q9Y3M2 126 aa8.02□□□□□ -1.13
PABPC1-205ENST00000518196 A4D1N5 150 aa8.01□□□□□ -1.13
PABPC1-205ENST00000518196 HNRNPA3P51991 378 aaKnown RBP8.01□□□□□ -1.13
PABPC1-205ENST00000518196 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
PABPC1-205ENST00000518196 TMEM126AQ9H061 195 aa8.01□□□□□ -1.13
PABPC1-205ENST00000518196 TRAV13-2A0A0B4J235 113 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 TSTD3H0UI37 97 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 PRYO14603 147 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 IGLV6-57P01721 117 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 HSD52Q0P140 79 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 REG3GQ6UW15 175 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 CEND1Q8N111 149 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
PABPC1-205ENST00000518196 BCE1O60756 84 aa7.99□□□□□ -1.13
PABPC1-205ENST00000518196 A6NDN8 102 aa7.98□□□□□ -1.13
PABPC1-205ENST00000518196 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
PABPC1-205ENST00000518196 KRTAP10-4P60372 401 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-205ENST00000518196 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
PABPC1-205ENST00000518196 KRTAP9-9Q9BYP9 154 aa7.98□□□□□ -1.13
PABPC1-205ENST00000518196 KRTAP9-4Q9BYQ2 154 aa7.98□□□□□ -1.13
PABPC1-205ENST00000518196 VPS13BQ7Z7G8 4022 aa7.98□□□□□ -1.13
PABPC1-205ENST00000518196 TRAV23DV6A0A075B6W5 121 aa7.97□□□□□ -1.13
PABPC1-205ENST00000518196 UBE2AP49459 152 aa7.97□□□□□ -1.13
PABPC1-205ENST00000518196 HERC2O95714 4834 aa7.96□□□□□ -1.13
PABPC1-205ENST00000518196 FAM19A1Q7Z5A9 133 aa7.96□□□□□ -1.14
PABPC1-205ENST00000518196 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
PABPC1-205ENST00000518196 RPL28P46779 137 aaKnown RBP7.95□□□□□ -1.14
PABPC1-205ENST00000518196 HINT1P49773 126 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-205ENST00000518196 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
PABPC1-205ENST00000518196 ZNF861PO60384 105 aa7.94□□□□□ -1.14
PABPC1-205ENST00000518196 SPRR1AP35321 89 aa7.94□□□□□ -1.14
PABPC1-205ENST00000518196 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
PABPC1-205ENST00000518196 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
PABPC1-205ENST00000518196 ZNF73O43830 326 aaPredicted RBP7.93□□□□□ -1.14
PABPC1-205ENST00000518196 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 CFC1P0CG37 223 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 INAFM2P0DMQ5 153 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 FXYD2P54710 66 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 CTAG1AP78358 180 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 FAT1Q14517 4588 aa7.93□□□□□ -1.14
PABPC1-205ENST00000518196 A0A0B4J2C4 111 aa7.92□□□□□ -1.14
PABPC1-205ENST00000518196 RPL13AP40429 203 aaKnown RBP7.92□□□□□ -1.14
PABPC1-205ENST00000518196 H0Y9J4 135 aa7.91□□□□□ -1.14
PABPC1-205ENST00000518196 PRLHP81277 87 aa7.91□□□□□ -1.14
PABPC1-205ENST00000518196 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
PABPC1-205ENST00000518196 M0R143 59 aa7.9□□□□□ -1.14
PABPC1-205ENST00000518196 BVES-AS1Q5T3Y7 98 aa7.9□□□□□ -1.14
PABPC1-205ENST00000518196 NHP2Q9NX24 153 aaKnown RBP7.9□□□□□ -1.14
PABPC1-205ENST00000518196 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
PABPC1-205ENST00000518196 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
PABPC1-205ENST00000518196 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
PABPC1-205ENST00000518196 PRO1854Q9UHT4 67 aa7.89□□□□□ -1.15
PABPC1-205ENST00000518196 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
PABPC1-205ENST00000518196 TRBV7-6A0A0J9YX20 115 aa7.88□□□□□ -1.15
PABPC1-205ENST00000518196 COX7BP24311 80 aa7.88□□□□□ -1.15
PABPC1-205ENST00000518196 Q6ZRX8 168 aa7.88□□□□□ -1.15
PABPC1-205ENST00000518196 H7C2G1 150 aa7.87□□□□□ -1.15
PABPC1-205ENST00000518196 VAMP3Q15836 100 aa7.87□□□□□ -1.15
PABPC1-205ENST00000518196 Q1RN00 199 aa7.87□□□□□ -1.15
PABPC1-205ENST00000518196 HIGD2AQ9BW72 106 aa7.87□□□□□ -1.15
PABPC1-205ENST00000518196 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
PABPC1-205ENST00000518196 ELOF1P60002 83 aaKnown RBP7.85□□□□□ -1.15
PABPC1-205ENST00000518196 SMCR5Q8TEV8 140 aa7.85□□□□□ -1.15
PABPC1-205ENST00000518196 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
PABPC1-205ENST00000518196 DHRS4-AS1Q9P1J3 65 aa7.84□□□□□ -1.15
PABPC1-205ENST00000518196 K7ERJ3 54 aa7.83□□□□□ -1.16
PABPC1-205ENST00000518196 Q9BRP9 147 aa7.83□□□□□ -1.16
PABPC1-205ENST00000518196 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-205ENST00000518196 SLC25A20O43772 301 aa7.81□□□□□ -1.16
PABPC1-205ENST00000518196 H0YGX0 51 aa7.8□□□□□ -1.16
PABPC1-205ENST00000518196 PSMB2P49721 201 aa7.8□□□□□ -1.16
PABPC1-205ENST00000518196 BATFQ16520 125 aa7.8□□□□□ -1.16
PABPC1-205ENST00000518196 ERC2-IT1O76042 136 aa7.79□□□□□ -1.16
PABPC1-205ENST00000518196 OXTP01178 125 aa7.79□□□□□ -1.16
PABPC1-205ENST00000518196 SNCGO76070 127 aa7.78□□□□□ -1.16
PABPC1-205ENST00000518196 TSPAN13O95857 204 aa7.78□□□□□ -1.16
PABPC1-205ENST00000518196 COX6CP09669 75 aa7.78□□□□□ -1.16
PABPC1-205ENST00000518196 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
PABPC1-205ENST00000518196 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
PABPC1-205ENST00000518196 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-205ENST00000518196 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
PABPC1-205ENST00000518196 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
PABPC1-205ENST00000518196 LINC01600Q96MT4 127 aa7.77□□□□□ -1.17
PABPC1-205ENST00000518196 PCP4L1A6NKN8 68 aa7.76□□□□□ -1.17
PABPC1-205ENST00000518196 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-205ENST00000518196 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
PABPC1-205ENST00000518196 FAM229BQ4G0N7 80 aa7.75□□□□□ -1.17
PABPC1-205ENST00000518196 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
PABPC1-205ENST00000518196 SCGB1C2P0DMR2 95 aa7.74□□□□□ -1.17
PABPC1-205ENST00000518196 CRYGAP11844 174 aa7.74□□□□□ -1.17
PABPC1-205ENST00000518196 ST20-AS1Q8NBB2 130 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms