RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 A0A0B4J2C4 111 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 A0A1B0GWB2 263 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 M0R143 59 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 CFC1BP0CG36 223 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 CFC1P0CG37 223 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
ARFGEF1-202ENST00000517955 NCR3O14931 201 aa7.11□□□□□ -1.27
ARFGEF1-202ENST00000517955 BVES-AS1Q5T3Y7 98 aa7.11□□□□□ -1.27
ARFGEF1-202ENST00000517955 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
ARFGEF1-202ENST00000517955 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
ARFGEF1-202ENST00000517955 PRYO14603 147 aa7.09□□□□□ -1.27
ARFGEF1-202ENST00000517955 HAMPP81172 84 aa7.09□□□□□ -1.27
ARFGEF1-202ENST00000517955 S100A7L2Q5SY68 101 aa7.09□□□□□ -1.27
ARFGEF1-202ENST00000517955 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
ARFGEF1-202ENST00000517955 GAGE10A6NGK3 116 aa7.08□□□□□ -1.28
ARFGEF1-202ENST00000517955 RPL37AP8A6NKH3 93 aa7.08□□□□□ -1.28
ARFGEF1-202ENST00000517955 SPRR1AP35321 89 aa7.08□□□□□ -1.28
ARFGEF1-202ENST00000517955 UBE2BP63146 152 aa7.08□□□□□ -1.28
ARFGEF1-202ENST00000517955 HSPG2P98160 4391 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 A6NDN8 102 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 HINT1P49773 126 aaPredicted RBP7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 OR13C6PQ8NH95 151 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 RAB37Q96AX2 223 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 PRO1854Q9UHT4 67 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 PSORS1C2Q9UIG4 136 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 VPS13BQ7Z7G8 4022 aa7.07□□□□□ -1.28
ARFGEF1-202ENST00000517955 TRAV23DV6A0A075B6W5 121 aa7.06□□□□□ -1.28
ARFGEF1-202ENST00000517955 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
ARFGEF1-202ENST00000517955 NHP2Q9NX24 153 aaKnown RBP7.06□□□□□ -1.28
ARFGEF1-202ENST00000517955 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
ARFGEF1-202ENST00000517955 H0Y9J4 135 aa7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 BCE1O60756 84 aa7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 RPL13AP40429 203 aaKnown RBP7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 RPL28P46779 137 aaKnown RBP7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
ARFGEF1-202ENST00000517955 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
ARFGEF1-202ENST00000517955 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
ARFGEF1-202ENST00000517955 FAT1Q14517 4588 aa7.02□□□□□ -1.29
ARFGEF1-202ENST00000517955 RPL37AP61513 92 aaKnown RBP7.02□□□□□ -1.29
ARFGEF1-202ENST00000517955 C1orf137Q5JT78 98 aa7.02□□□□□ -1.29
ARFGEF1-202ENST00000517955 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
ARFGEF1-202ENST00000517955 Q8N1X5 172 aa7.02□□□□□ -1.29
ARFGEF1-202ENST00000517955 DIRC1Q969H9 104 aa7.02□□□□□ -1.29
ARFGEF1-202ENST00000517955 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
ARFGEF1-202ENST00000517955 B5MCH6 92 aa7.01□□□□□ -1.29
ARFGEF1-202ENST00000517955 K7ERJ3 54 aa7.01□□□□□ -1.29
ARFGEF1-202ENST00000517955 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
ARFGEF1-202ENST00000517955 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
ARFGEF1-202ENST00000517955 SNHG12Q9BXW3 62 aa7.01□□□□□ -1.29
ARFGEF1-202ENST00000517955 ZNF861PO60384 105 aa7□□□□□ -1.29
ARFGEF1-202ENST00000517955 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
ARFGEF1-202ENST00000517955 C6orf99Q4VX62 202 aa7□□□□□ -1.29
ARFGEF1-202ENST00000517955 ETDCA0A1B0GVM5 59 aa6.99□□□□□ -1.29
ARFGEF1-202ENST00000517955 INAFM2P0DMQ5 153 aa6.99□□□□□ -1.29
ARFGEF1-202ENST00000517955 Q6ZRX8 168 aa6.99□□□□□ -1.29
ARFGEF1-202ENST00000517955 TSPAN13O95857 204 aa6.98□□□□□ -1.29
ARFGEF1-202ENST00000517955 VAMP3Q15836 100 aa6.98□□□□□ -1.29
ARFGEF1-202ENST00000517955 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
ARFGEF1-202ENST00000517955 H0YGX0 51 aa6.97□□□□□ -1.29
ARFGEF1-202ENST00000517955 H7C2G1 150 aa6.97□□□□□ -1.29
ARFGEF1-202ENST00000517955 COX7BP24311 80 aa6.97□□□□□ -1.29
ARFGEF1-202ENST00000517955 BATFQ16520 125 aa6.97□□□□□ -1.29
ARFGEF1-202ENST00000517955 Q5VSD8 79 aa6.97□□□□□ -1.29
ARFGEF1-202ENST00000517955 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
ARFGEF1-202ENST00000517955 UBE2AP49459 152 aa6.96□□□□□ -1.3
ARFGEF1-202ENST00000517955 Q1RN00 199 aa6.96□□□□□ -1.3
ARFGEF1-202ENST00000517955 COL5A1-AS1Q5SY13 56 aa6.96□□□□□ -1.3
ARFGEF1-202ENST00000517955 DHRS4-AS1Q9P1J3 65 aa6.96□□□□□ -1.3
ARFGEF1-202ENST00000517955 TAX1BP3O14907 124 aa6.95□□□□□ -1.3
ARFGEF1-202ENST00000517955 TRIAP1O43715 76 aa6.95□□□□□ -1.3
ARFGEF1-202ENST00000517955 COX6CP09669 75 aa6.95□□□□□ -1.3
ARFGEF1-202ENST00000517955 PRLHP81277 87 aa6.95□□□□□ -1.3
ARFGEF1-202ENST00000517955 SPINK6Q6UWN8 80 aa6.95□□□□□ -1.3
ARFGEF1-202ENST00000517955 Q9BRP9 147 aa6.95□□□□□ -1.3
ARFGEF1-202ENST00000517955 A0A1B0GX51 115 aa6.94□□□□□ -1.3
ARFGEF1-202ENST00000517955 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
ARFGEF1-202ENST00000517955 SMCR5Q8TEV8 140 aa6.94□□□□□ -1.3
ARFGEF1-202ENST00000517955 C9orf118A6NHY6 69 aa6.93□□□□□ -1.3
ARFGEF1-202ENST00000517955 PSMB2P49721 201 aa6.92□□□□□ -1.3
ARFGEF1-202ENST00000517955 SLC25A20O43772 301 aa6.91□□□□□ -1.3
ARFGEF1-202ENST00000517955 A0A1B0GV90 55 aa6.9□□□□□ -1.3
ARFGEF1-202ENST00000517955 hADV29S1A0JD25 119 aa6.9□□□□□ -1.3
ARFGEF1-202ENST00000517955 SNCGO76070 127 aa6.9□□□□□ -1.3
ARFGEF1-202ENST00000517955 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
ARFGEF1-202ENST00000517955 HIGD2AQ9BW72 106 aa6.9□□□□□ -1.3
ARFGEF1-202ENST00000517955 ERC2-IT1O76042 136 aa6.89□□□□□ -1.31
ARFGEF1-202ENST00000517955 SCGB1C2P0DMR2 95 aa6.89□□□□□ -1.31
ARFGEF1-202ENST00000517955 FAM218AQ96MZ4 157 aa6.89□□□□□ -1.31
ARFGEF1-202ENST00000517955 PKHD1L1Q86WI1 4243 aa6.88□□□□□ -1.31
ARFGEF1-202ENST00000517955 H3BUT2 72 aa6.88□□□□□ -1.31
ARFGEF1-202ENST00000517955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
ARFGEF1-202ENST00000517955 ZNF706Q9Y5V0 76 aaPredicted RBP6.88□□□□□ -1.31
ARFGEF1-202ENST00000517955 TRBV20-1A0A075B6N2 111 aa6.87□□□□□ -1.31
ARFGEF1-202ENST00000517955 A0A1W2PPM0 123 aa6.87□□□□□ -1.31
ARFGEF1-202ENST00000517955 LST1O00453 97 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms