RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 MEIG1Q5JSS6 88 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 Q6ZUT4 128 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 SCGB3A1Q96QR1 104 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 TIMM21Q9BVV7 248 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 TTTY13Q9BZ97 58 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 TRBV7-6A0A0J9YX20 115 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 K7EMI3 77 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 CFC1P0CG37 223 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 UBE2AP49459 152 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 NDUFA6P56556 154 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 PMCHL1Q16048 86 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 HIGD2BQ4VC39 106 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 CAMK2N1Q7Z7J9 78 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 C5orf38Q86SI9 138 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 BAGE3Q86Y29 109 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 CIRBP-AS1Q8TBR5 109 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 DPH3Q96FX2 82 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 TMEM141Q96I45 108 aa1.77□□□□□ -2.13
SKP1-204ENST00000517691 IGLV1-50A0A075B6I6 118 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 IGHV1-58A0A0C4DH39 117 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 COLCA2A8K830 154 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 LGALS3P17931 250 aaKnown RBP1.76□□□□□ -2.13
SKP1-204ENST00000517691 MRPS36P82909 103 aaKnown RBP1.76□□□□□ -2.13
SKP1-204ENST00000517691 LINC01554Q52M75 96 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 ZC2HC1BQ5TFG8 222 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 KRTAP26-1Q6PEX3 210 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 C18orf32Q8TCD1 76 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 EPPK1P58107 5090 aaKnown RBP1.76□□□□□ -2.13
SKP1-204ENST00000517691 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.76□□□□□ -2.13
SKP1-204ENST00000517691 LINC01546A6NGU7 62 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 LINC01549A6NIU2 74 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 IGIPA6NJ69 53 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 KRTAP10-1P60331 282 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 UBE2BP63146 152 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 HSD52Q0P140 79 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 GTF2H5Q6ZYL4 71 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 C15orf56Q8N910 161 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 LINC00526Q96FQ7 95 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 DNAH2Q9P225 4427 aa1.76□□□□□ -2.13
SKP1-204ENST00000517691 DNAH10Q8IVF4 4471 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 IGHV3-64A0A075B6Q5 118 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 A6NED7 52 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 A8MWP4 228 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 H3BMG7 143 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 LEPROTO15243 131 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 HBDP02042 147 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 UBE2D1P51668 147 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 KRTAP10-5P60370 271 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 HAMPP81172 84 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 COX6A2Q02221 97 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 FAM19A2Q8N3H0 131 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 CHCHD1Q96BP2 118 aaKnown RBP1.75□□□□□ -2.13
SKP1-204ENST00000517691 AMELXQ99217 191 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 TOMM7Q9P0U1 55 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 PKD1P98161 4303 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 DNAH17Q9UFH2 4485 aa1.75□□□□□ -2.13
SKP1-204ENST00000517691 IGLV4-69A0A075B6H9 119 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 A0A087WYN8 130 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 GVQW2A0A096LPI5 108 aaPredicted RBP1.74□□□□□ -2.13
SKP1-204ENST00000517691 FABP4P15090 132 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 TSPEAR-AS2P59090 65 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 SEC11AP67812 179 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 SPAG11BQ08648 103 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 SYCNQ0VAF6 134 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 Q1RN00 199 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 COL5A1-AS1Q5SY13 56 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 FAT2Q9NYQ8 4349 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 A0A096LNJ9 63 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 IGKV2-24A0A0C4DH68 120 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 BPY2O14599 106 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
SKP1-204ENST00000517691 CNBPP62633 177 aaKnown RBP1.74□□□□□ -2.13
SKP1-204ENST00000517691 C9orf129Q5T035 196 aaKnown RBP1.74□□□□□ -2.13
SKP1-204ENST00000517691 SDIM1Q6ZPB5 146 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 C9orf163Q8N9P6 203 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 IFI27L1Q96BM0 104 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 CDKN2A-AS1Q9UH64 79 aa1.74□□□□□ -2.13
SKP1-204ENST00000517691 H3BRM9 83 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 NDUFA1O15239 70 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 NUPR1O60356 82 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 HIST1H2BKO60814 126 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 LEPROTL1O95214 131 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 HIST1H2BJP06899 126 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 SPINK8P0C7L1 97 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 TMEM170BQ5T4T1 132 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 C2orf82Q6UX34 121 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 UNQ6190/PRO20217Q6UXQ8 127 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 SOSTDC1Q6X4U4 206 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 PCP2Q8IVA1 136 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 PRO1933Q9H354 126 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 K7ERS5 55 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 PHF5AQ7RTV0 110 aaKnown RBP1.73□□□□□ -2.13
SKP1-204ENST00000517691 COX7B2Q8TF08 81 aa1.73□□□□□ -2.13
SKP1-204ENST00000517691 MRPL35Q9NZE8 188 aaKnown RBP1.73□□□□□ -2.13
SKP1-204ENST00000517691 A0A096LNI7 61 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 TRAV12-1A0A0B4J245 112 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 C11orf86A6NJI1 115 aa1.72□□□□□ -2.13
SKP1-204ENST00000517691 PANO1I0J062 215 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms