RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 SNHG12Q9BXW3 62 aa4.42□□□□□ -1.7
HMBOX1-204ENST00000517386 A0A096LNJ9 63 aa4.41□□□□□ -1.7
HMBOX1-204ENST00000517386 LINC01546A6NGU7 62 aa4.41□□□□□ -1.7
HMBOX1-204ENST00000517386 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
HMBOX1-204ENST00000517386 SMCR5Q8TEV8 140 aa4.41□□□□□ -1.7
HMBOX1-204ENST00000517386 SPANXB1Q9NS25 103 aaPredicted RBP4.41□□□□□ -1.7
HMBOX1-204ENST00000517386 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.71
HMBOX1-204ENST00000517386 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
HMBOX1-204ENST00000517386 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
HMBOX1-204ENST00000517386 SPAG11AQ6PDA7 123 aa4.4□□□□□ -1.71
HMBOX1-204ENST00000517386 BAGE3Q86Y29 109 aa4.4□□□□□ -1.71
HMBOX1-204ENST00000517386 GNB1LQ9BYB4 327 aa4.4□□□□□ -1.71
HMBOX1-204ENST00000517386 SMIM13P0DJ93 91 aa4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 MOBPQ13875 183 aa4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 COX17Q14061 63 aa4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 PYY3Q5JQD4 70 aa4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 GAGE2AQ6NT46 116 aa4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 FP248Q71RG6 208 aaPredicted RBP4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 URB1-AS1Q96HZ7 61 aa4.39□□□□□ -1.71
HMBOX1-204ENST00000517386 ETDCA0A1B0GVM5 59 aa4.38□□□□□ -1.71
HMBOX1-204ENST00000517386 ERC2-IT1O76042 136 aa4.38□□□□□ -1.71
HMBOX1-204ENST00000517386 SS18L2Q9UHA2 77 aa4.38□□□□□ -1.71
HMBOX1-204ENST00000517386 ZNF706Q9Y5V0 76 aaPredicted RBP4.38□□□□□ -1.71
HMBOX1-204ENST00000517386 TRAV9-1A0A075B6T8 112 aa4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 TMEM218A2RU14 115 aa4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 HBDP02042 147 aa4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 SNRPEP62304 92 aaKnown RBP4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 MEIG1Q5JSS6 88 aa4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
HMBOX1-204ENST00000517386 TRBV10-3A0A0K0K1G6 114 aa4.36□□□□□ -1.71
HMBOX1-204ENST00000517386 PRYO14603 147 aa4.36□□□□□ -1.71
HMBOX1-204ENST00000517386 MIR7-3HGQ8N6C7 128 aa4.36□□□□□ -1.71
HMBOX1-204ENST00000517386 C18orf32Q8TCD1 76 aa4.36□□□□□ -1.71
HMBOX1-204ENST00000517386 TMEM223A0PJW6 202 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 SPINK1P00995 79 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 Q8N377 158 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 SEC11CQ9BY50 192 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 RPS10P5Q9NQ39 176 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 SPANXCQ9NY87 97 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 TRAPPC1Q9Y5R8 145 aa4.35□□□□□ -1.71
HMBOX1-204ENST00000517386 KRTAP4-16G5E9R7 235 aaPredicted RBP4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 SPRR1AP35321 89 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 TAL2Q16559 108 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 COL5A1-AS1Q5SY13 56 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 SIGMAR1Q99720 223 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 KCNQ1DNQ9H478 68 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 NDUFA12Q9UI09 145 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
HMBOX1-204ENST00000517386 B5MCH6 92 aa4.33□□□□□ -1.72
HMBOX1-204ENST00000517386 LINC00483Q53H64 154 aa4.33□□□□□ -1.72
HMBOX1-204ENST00000517386 C9orf153Q5TBE3 101 aa4.33□□□□□ -1.72
HMBOX1-204ENST00000517386 Q9BRP9 147 aa4.33□□□□□ -1.72
HMBOX1-204ENST00000517386 SLC25A20O43772 301 aa4.32□□□□□ -1.72
HMBOX1-204ENST00000517386 S100A2P29034 98 aa4.32□□□□□ -1.72
HMBOX1-204ENST00000517386 TSPEAR-AS2P59090 65 aa4.32□□□□□ -1.72
HMBOX1-204ENST00000517386 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
HMBOX1-204ENST00000517386 HRCT1Q6UXD1 115 aa4.32□□□□□ -1.72
HMBOX1-204ENST00000517386 HSPB8Q9UJY1 196 aa4.32□□□□□ -1.72
HMBOX1-204ENST00000517386 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
HMBOX1-204ENST00000517386 PCOTHQ58A44 107 aa4.31□□□□□ -1.72
HMBOX1-204ENST00000517386 ST20-AS1Q8NBB2 130 aa4.31□□□□□ -1.72
HMBOX1-204ENST00000517386 IFI27L1Q96BM0 104 aa4.31□□□□□ -1.72
HMBOX1-204ENST00000517386 IGLV8-61A0A075B6I0 122 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 A0A1B0GX51 115 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 NPC2P61916 151 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 MT1HP80294 61 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
HMBOX1-204ENST00000517386 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 CD164Q04900 197 aa4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 JOSD1Q15040 202 aaPredicted RBP4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 RHEBQ15382 184 aa4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 C4orf26Q17RF5 130 aa4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 Q6ZRX8 168 aa4.29□□□□□ -1.72
HMBOX1-204ENST00000517386 S100A7L2Q5SY68 101 aa4.28□□□□□ -1.72
HMBOX1-204ENST00000517386 C10orf91Q5T1B1 145 aa4.28□□□□□ -1.72
HMBOX1-204ENST00000517386 SVBPQ8N300 66 aa4.28□□□□□ -1.72
HMBOX1-204ENST00000517386 PMCHL2Q9BQD1 86 aa4.28□□□□□ -1.72
HMBOX1-204ENST00000517386 PRO1933Q9H354 126 aa4.27□□□□□ -1.73
HMBOX1-204ENST00000517386 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 COLCA2A8K830 154 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 H7C2G1 150 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 LEPROTO15243 131 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 APOC3P02656 99 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 RPS29P62273 56 aaKnown RBP4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 SOSTDC1Q6X4U4 206 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 MIEN1Q9BRT3 115 aa4.26□□□□□ -1.73
HMBOX1-204ENST00000517386 TRBV10-2A0A0K0K1G8 114 aa4.25□□□□□ -1.73
HMBOX1-204ENST00000517386 J3QQQ9 107 aa4.25□□□□□ -1.73
HMBOX1-204ENST00000517386 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
HMBOX1-204ENST00000517386 IGLV6-57P01721 117 aa4.25□□□□□ -1.73
HMBOX1-204ENST00000517386 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms