RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 KRTDAPP60985 99 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 ETDBQ3ZM63 59 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 SERP2Q8N6R1 65 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 ST20Q9HBF5 79 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 CACFD1Q9UGQ2 172 aa2.26□□□□□ -2.05
CPNE3-201ENST00000517354 HYDINQ4G0P3 5121 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 STAB2Q8WWQ8 2551 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 RYR2Q92736 4967 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 LCE6AA0A183 80 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 CLPSL1A2RUU4 121 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 ADIRFQ15847 76 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 LYPD5Q6UWN5 251 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 MGST2Q99735 147 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 TMEM14CQ9P0S9 112 aa2.25□□□□□ -2.05
CPNE3-201ENST00000517354 A0A1W2PPM0 123 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 SYS1-DBNDD2H3BUS1 97 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 IGLC2P0DOY2 106 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 IGLC3P0DOY3 106 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 WFDC2Q14508 124 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 DEFB121Q5J5C9 76 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 TRGV9Q99603 122 aa2.24□□□□□ -2.05
CPNE3-201ENST00000517354 DOCK11Q5JSL3 2073 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 CFDP00746 253 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-201ENST00000517354 BVES-AS1Q5T3Y7 98 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 GDF5OSQ5U4N7 250 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 IFI27L1Q96BM0 104 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 LIMD2Q9BT23 127 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 NXT2Q9NPJ8 142 aaKnown RBP2.23□□□□□ -2.05
CPNE3-201ENST00000517354 HIGD1BQ9P298 99 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 RABAC1Q9UI14 185 aa2.23□□□□□ -2.05
CPNE3-201ENST00000517354 TRBV7-1A0A0A6YYK4 115 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 TRAV12-3A0A0B4J271 114 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 TEX49A0A1B0GTD5 131 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 TMEM30CPA0ZSE6 113 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 NMSQ5H8A3 153 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 CYP4F30PQ9H0H9 118 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 MANBALQ9NQG1 85 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 C22orf24Q9Y442 160 aa2.22□□□□□ -2.05
CPNE3-201ENST00000517354 DYNC2H1Q8NCM8 4307 aaKnown RBP2.22□□□□□ -2.05
CPNE3-201ENST00000517354 DNAH1Q9P2D7 4330 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 IGLV3-32A0A0A0MS00 114 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 A0A0G2JND7 137 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 H7BZZ5 65 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 SIX6O95475 246 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 LINC00322Q6ZN03 302 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-201ENST00000517354 CYP2G1PQ6ZSU1 146 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 HERC2O95714 4834 aa2.21□□□□□ -2.06
CPNE3-201ENST00000517354 SACSQ9NZJ4 4579 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 H3BUT2 72 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 K7EIL1 84 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 LINC00299Q6ZSB3 139 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 OBSCN-AS1Q96MR7 158 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 DYNLRB1Q9NP97 96 aa2.2□□□□□ -2.06
CPNE3-201ENST00000517354 DNAH9Q9NYC9 4486 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 TRBV10-1A0A0K0K1A3 114 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 LYNX1G3V0Z9 82 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 NDUFC1O43677 76 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 MRPL33O75394 65 aaKnown RBP2.19□□□□□ -2.06
CPNE3-201ENST00000517354 PPYP01298 95 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 IGHV3-33P01772 117 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 LYNX1P0DP58 116 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 UBE2D1P51668 147 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 UBE2D3P61077 147 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 UBE2D2P62837 147 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 PMCHL1Q16048 86 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 Q5VV11 94 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 SFTA2Q6UW10 78 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 WFDC9Q8NEX5 89 aa2.19□□□□□ -2.06
CPNE3-201ENST00000517354 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 TRBV7-3A0A075B6L6 115 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 TRAV22A0A0B4J277 110 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 NUPR2A6NF83 97 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 JMJD7-PLA2G4BH0Y9G9 81 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 SPATA45Q537H7 98 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 C10orf128Q5T292 105 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 FAM223AQ8IWN6 122 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 Q8N6K4 173 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 DEFB108BQ8NET1 73 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 S100ZQ8WXG8 99 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 FAM167A-AS1Q96KT0 104 aa2.18□□□□□ -2.06
CPNE3-201ENST00000517354 LYSTQ99698 3801 aa2.17□□□□□ -2.06
CPNE3-201ENST00000517354 DEFB112Q30KQ8 113 aa2.17□□□□□ -2.06
CPNE3-201ENST00000517354 HEPN1Q6WQI6 88 aa2.17□□□□□ -2.06
CPNE3-201ENST00000517354 VMO1Q7Z5L0 202 aa2.17□□□□□ -2.06
CPNE3-201ENST00000517354 MRPL36Q9P0J6 103 aaKnown RBP2.17□□□□□ -2.06
CPNE3-201ENST00000517354 CHKB-CPT1BH3BT56 60 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 EDDM3BP56851 147 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 ZNF818PQ6ZRF7 136 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 NDUFA11Q86Y39 141 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 PRO1854Q9UHT4 67 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
CPNE3-201ENST00000517354 SORL1Q92673 2214 aa2.15□□□□□ -2.06
CPNE3-201ENST00000517354 DNAH7Q8WXX0 4024 aa2.15□□□□□ -2.06
CPNE3-201ENST00000517354 TRAV23DV6A0A075B6W5 121 aa2.15□□□□□ -2.07
CPNE3-201ENST00000517354 KLKP1Q107X0 134 aa2.15□□□□□ -2.07
CPNE3-201ENST00000517354 C18orf32Q8TCD1 76 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms