RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
HMGCLL1-209ENST00000515546 PRLHP81277 87 aa8.77□□□□□ -1.01
HMGCLL1-209ENST00000515546 MIEN1Q9BRT3 115 aa8.77□□□□□ -1.01
HMGCLL1-209ENST00000515546 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
HMGCLL1-209ENST00000515546 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
HMGCLL1-209ENST00000515546 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
HMGCLL1-209ENST00000515546 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
HMGCLL1-209ENST00000515546 CRYGAP11844 174 aa8.75□□□□□ -1.01
HMGCLL1-209ENST00000515546 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
HMGCLL1-209ENST00000515546 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
HMGCLL1-209ENST00000515546 TSTD3H0UI37 97 aa8.73□□□□□ -1.01
HMGCLL1-209ENST00000515546 KRTAP13-2Q52LG2 175 aa8.73□□□□□ -1.01
HMGCLL1-209ENST00000515546 Q6ZVH6 145 aa8.73□□□□□ -1.01
HMGCLL1-209ENST00000515546 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
HMGCLL1-209ENST00000515546 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
HMGCLL1-209ENST00000515546 LPAP08519 4548 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 PRYO14603 147 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 LCE2BO14633 110 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 NCR3O14931 201 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 IFITM1P13164 125 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 SPRR1AP35321 89 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 HIST1H4GQ99525 98 aa8.72□□□□□ -1.01
HMGCLL1-209ENST00000515546 PPDPFQ9H3Y8 114 aa8.71□□□□□ -1.02
HMGCLL1-209ENST00000515546 KCNQ1DNQ9H478 68 aa8.71□□□□□ -1.02
HMGCLL1-209ENST00000515546 TAL2Q16559 108 aa8.7□□□□□ -1.02
HMGCLL1-209ENST00000515546 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
HMGCLL1-209ENST00000515546 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
HMGCLL1-209ENST00000515546 KRTAP4-16G5E9R7 235 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-209ENST00000515546 HSD52Q0P140 79 aa8.69□□□□□ -1.02
HMGCLL1-209ENST00000515546 TRBV10-3A0A0K0K1G6 114 aa8.68□□□□□ -1.02
HMGCLL1-209ENST00000515546 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
HMGCLL1-209ENST00000515546 NDUFC2O95298 119 aa8.68□□□□□ -1.02
HMGCLL1-209ENST00000515546 CEND1Q8N111 149 aa8.68□□□□□ -1.02
HMGCLL1-209ENST00000515546 A4D1N5 150 aa8.67□□□□□ -1.02
HMGCLL1-209ENST00000515546 DDTP30046 118 aa8.67□□□□□ -1.02
HMGCLL1-209ENST00000515546 FXYD2P54710 66 aa8.67□□□□□ -1.02
HMGCLL1-209ENST00000515546 CTAG1AP78358 180 aa8.67□□□□□ -1.02
HMGCLL1-209ENST00000515546 COPS9Q8WXC6 57 aa8.67□□□□□ -1.02
HMGCLL1-209ENST00000515546 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
HMGCLL1-209ENST00000515546 SPRR4Q96PI1 79 aa8.66□□□□□ -1.02
HMGCLL1-209ENST00000515546 ETDCA0A1B0GVM5 59 aa8.63□□□□□ -1.03
HMGCLL1-209ENST00000515546 TSPAN13O95857 204 aa8.63□□□□□ -1.03
HMGCLL1-209ENST00000515546 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
HMGCLL1-209ENST00000515546 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
HMGCLL1-209ENST00000515546 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
HMGCLL1-209ENST00000515546 PRR4Q16378 134 aa8.62□□□□□ -1.03
HMGCLL1-209ENST00000515546 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
HMGCLL1-209ENST00000515546 SMCR5Q8TEV8 140 aa8.62□□□□□ -1.03
HMGCLL1-209ENST00000515546 B5MCH6 92 aa8.61□□□□□ -1.03
HMGCLL1-209ENST00000515546 HINT1P49773 126 aaPredicted RBP8.61□□□□□ -1.03
HMGCLL1-209ENST00000515546 C3orf22Q8N5N4 141 aa8.61□□□□□ -1.03
HMGCLL1-209ENST00000515546 CFC1BP0CG36 223 aa8.6□□□□□ -1.03
HMGCLL1-209ENST00000515546 CFC1P0CG37 223 aa8.6□□□□□ -1.03
HMGCLL1-209ENST00000515546 PCP4L1A6NKN8 68 aa8.59□□□□□ -1.03
HMGCLL1-209ENST00000515546 LINC00483Q53H64 154 aa8.59□□□□□ -1.03
HMGCLL1-209ENST00000515546 TRAV23DV6A0A075B6W5 121 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 A0A0B4J2C4 111 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 A0A1B0GWB2 263 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 A6NJY4 79 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 K7ERJ3 54 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 M0R143 59 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 Q6ZRX8 168 aa8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 NHP2Q9NX24 153 aaKnown RBP8.58□□□□□ -1.04
HMGCLL1-209ENST00000515546 OR13C6PQ8NH95 151 aa8.57□□□□□ -1.04
HMGCLL1-209ENST00000515546 Q9BRP9 147 aa8.57□□□□□ -1.04
HMGCLL1-209ENST00000515546 TRAV13-2A0A0B4J235 113 aa8.56□□□□□ -1.04
HMGCLL1-209ENST00000515546 A6NDN8 102 aa8.56□□□□□ -1.04
HMGCLL1-209ENST00000515546 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
HMGCLL1-209ENST00000515546 ZNF73O43830 326 aaPredicted RBP8.54□□□□□ -1.04
HMGCLL1-209ENST00000515546 RAB37Q96AX2 223 aa8.54□□□□□ -1.04
HMGCLL1-209ENST00000515546 BATFQ16520 125 aa8.53□□□□□ -1.04
HMGCLL1-209ENST00000515546 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
HMGCLL1-209ENST00000515546 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
HMGCLL1-209ENST00000515546 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
HMGCLL1-209ENST00000515546 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
HMGCLL1-209ENST00000515546 SNHG12Q9BXW3 62 aa8.52□□□□□ -1.05
HMGCLL1-209ENST00000515546 CBY1Q9Y3M2 126 aa8.52□□□□□ -1.05
HMGCLL1-209ENST00000515546 H7C2G1 150 aa8.51□□□□□ -1.05
HMGCLL1-209ENST00000515546 GAGE2AQ6NT46 116 aa8.51□□□□□ -1.05
HMGCLL1-209ENST00000515546 Q8NBF4 154 aa8.51□□□□□ -1.05
HMGCLL1-209ENST00000515546 MUC2Q02817 5179 aa8.5□□□□□ -1.05
HMGCLL1-209ENST00000515546 C6orf99Q4VX62 202 aa8.48□□□□□ -1.05
HMGCLL1-209ENST00000515546 MOBPQ13875 183 aa8.46□□□□□ -1.06
HMGCLL1-209ENST00000515546 TPRXLQ17RH7 258 aa8.46□□□□□ -1.06
HMGCLL1-209ENST00000515546 Q1RN00 199 aa8.46□□□□□ -1.06
HMGCLL1-209ENST00000515546 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
HMGCLL1-209ENST00000515546 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
HMGCLL1-209ENST00000515546 ST20-AS1Q8NBB2 130 aa8.45□□□□□ -1.06
HMGCLL1-209ENST00000515546 IGLV7-46A0A075B6I9 117 aa8.44□□□□□ -1.06
HMGCLL1-209ENST00000515546 TRIAP1O43715 76 aa8.44□□□□□ -1.06
HMGCLL1-209ENST00000515546 SPINK1P00995 79 aa8.44□□□□□ -1.06
HMGCLL1-209ENST00000515546 ELOF1P60002 83 aaKnown RBP8.44□□□□□ -1.06
HMGCLL1-209ENST00000515546 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
HMGCLL1-209ENST00000515546 TRBV7-6A0A0J9YX20 115 aa8.43□□□□□ -1.06
HMGCLL1-209ENST00000515546 TAX1BP3O14907 124 aa8.43□□□□□ -1.06
HMGCLL1-209ENST00000515546 SPRR1BP22528 89 aa8.43□□□□□ -1.06
HMGCLL1-209ENST00000515546 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
HMGCLL1-209ENST00000515546 FP248Q71RG6 208 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms