RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 IFI27L1Q96BM0 104 aa10.69□□□□□ -0.7
SQSTM1-215ENST00000514093 TRAPPC1Q9Y5R8 145 aa10.69□□□□□ -0.7
SQSTM1-215ENST00000514093 C5orf52A6NGY3 159 aa10.68□□□□□ -0.7
SQSTM1-215ENST00000514093 MIEN1Q9BRT3 115 aa10.68□□□□□ -0.7
SQSTM1-215ENST00000514093 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
SQSTM1-215ENST00000514093 FCGBPQ9Y6R7 5405 aaPredicted RBP10.67□□□□□ -0.7
SQSTM1-215ENST00000514093 NDUFC2O95298 119 aa10.66□□□□□ -0.7
SQSTM1-215ENST00000514093 C1orf195Q5TG92 126 aa10.66□□□□□ -0.7
SQSTM1-215ENST00000514093 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
SQSTM1-215ENST00000514093 NPC2P61916 151 aa10.65□□□□□ -0.7
SQSTM1-215ENST00000514093 EIF4EBP3O60516 100 aaPredicted RBP10.64□□□□□ -0.71
SQSTM1-215ENST00000514093 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
SQSTM1-215ENST00000514093 CD164Q04900 197 aa10.63□□□□□ -0.71
SQSTM1-215ENST00000514093 Q1RN00 199 aa10.63□□□□□ -0.71
SQSTM1-215ENST00000514093 SOSTDC1Q6X4U4 206 aa10.63□□□□□ -0.71
SQSTM1-215ENST00000514093 LEPROTO15243 131 aa10.62□□□□□ -0.71
SQSTM1-215ENST00000514093 H0Y8G0 127 aa10.61□□□□□ -0.71
SQSTM1-215ENST00000514093 COMMD7Q86VX2 200 aa10.61□□□□□ -0.71
SQSTM1-215ENST00000514093 PRO1933Q9H354 126 aa10.61□□□□□ -0.71
SQSTM1-215ENST00000514093 A0A0G2JQZ4 141 aa10.6□□□□□ -0.71
SQSTM1-215ENST00000514093 UQCC3Q6UW78 93 aa10.6□□□□□ -0.71
SQSTM1-215ENST00000514093 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
SQSTM1-215ENST00000514093 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
SQSTM1-215ENST00000514093 DEFB105AQ8NG35 78 aa10.59□□□□□ -0.71
SQSTM1-215ENST00000514093 J3QQQ9 107 aa10.58□□□□□ -0.72
SQSTM1-215ENST00000514093 CFC1P0CG37 223 aa10.58□□□□□ -0.72
SQSTM1-215ENST00000514093 Q5XG85 94 aa10.58□□□□□ -0.72
SQSTM1-215ENST00000514093 IFITM2Q01629 132 aa10.57□□□□□ -0.72
SQSTM1-215ENST00000514093 DHRS4-AS1Q9P1J3 65 aa10.57□□□□□ -0.72
SQSTM1-215ENST00000514093 TAL2Q16559 108 aa10.56□□□□□ -0.72
SQSTM1-215ENST00000514093 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
SQSTM1-215ENST00000514093 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
SQSTM1-215ENST00000514093 CHCHD1Q96BP2 118 aaKnown RBP10.55□□□□□ -0.72
SQSTM1-215ENST00000514093 OR13C6PQ8NH95 151 aa10.54□□□□□ -0.72
SQSTM1-215ENST00000514093 LGALS3P17931 250 aaKnown RBP10.53□□□□□ -0.72
SQSTM1-215ENST00000514093 AKR1D1P51857 326 aa10.53□□□□□ -0.72
SQSTM1-215ENST00000514093 RHEBQ15382 184 aa10.53□□□□□ -0.72
SQSTM1-215ENST00000514093 CBY1Q9Y3M2 126 aa10.52□□□□□ -0.73
SQSTM1-215ENST00000514093 NMUP48645 174 aa10.51□□□□□ -0.73
SQSTM1-215ENST00000514093 SYNE2Q8WXH0 6885 aaKnown RBP10.5□□□□□ -0.73
SQSTM1-215ENST00000514093 KRTAP19-1Q8IUB9 90 aa10.5□□□□□ -0.73
SQSTM1-215ENST00000514093 TEX49A0A1B0GTD5 131 aa10.49□□□□□ -0.73
SQSTM1-215ENST00000514093 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
SQSTM1-215ENST00000514093 COX7BP24311 80 aa10.48□□□□□ -0.73
SQSTM1-215ENST00000514093 ELOF1P60002 83 aaKnown RBP10.48□□□□□ -0.73
SQSTM1-215ENST00000514093 HERVK_113P61574 105 aa10.47□□□□□ -0.73
SQSTM1-215ENST00000514093 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
SQSTM1-215ENST00000514093 HSBP1O75506 76 aa10.46□□□□□ -0.73
SQSTM1-215ENST00000514093 C10orf91Q5T1B1 145 aa10.46□□□□□ -0.73
SQSTM1-215ENST00000514093 PLNP26678 52 aa10.45□□□□□ -0.74
SQSTM1-215ENST00000514093 C6orf99Q4VX62 202 aa10.45□□□□□ -0.74
SQSTM1-215ENST00000514093 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
SQSTM1-215ENST00000514093 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
SQSTM1-215ENST00000514093 LINC00308Q8TCZ7 52 aa10.43□□□□□ -0.74
SQSTM1-215ENST00000514093 DPM2O94777 84 aa10.42□□□□□ -0.74
SQSTM1-215ENST00000514093 MACF1Q9UPN3 7388 aaKnown RBP10.41□□□□□ -0.74
SQSTM1-215ENST00000514093 LCE2BO14633 110 aa10.41□□□□□ -0.74
SQSTM1-215ENST00000514093 LEPROTL1O95214 131 aa10.41□□□□□ -0.74
SQSTM1-215ENST00000514093 TCL1BO95988 128 aa10.41□□□□□ -0.74
SQSTM1-215ENST00000514093 PCP2Q8IVA1 136 aa10.41□□□□□ -0.74
SQSTM1-215ENST00000514093 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
SQSTM1-215ENST00000514093 C20orf202A1L168 122 aa10.39□□□□□ -0.75
SQSTM1-215ENST00000514093 IGKCP01834 107 aa10.39□□□□□ -0.75
SQSTM1-215ENST00000514093 MT2AP02795 61 aa10.39□□□□□ -0.75
SQSTM1-215ENST00000514093 OBSCN-AS1Q96MR7 158 aa10.39□□□□□ -0.75
SQSTM1-215ENST00000514093 LITAFQ99732 161 aa10.38□□□□□ -0.75
SQSTM1-215ENST00000514093 Q75L30 129 aa10.37□□□□□ -0.75
SQSTM1-215ENST00000514093 IGLV5-48A0A075B6I7 105 aa10.36□□□□□ -0.75
SQSTM1-215ENST00000514093 FABP4P15090 132 aa10.35□□□□□ -0.75
SQSTM1-215ENST00000514093 E9PLD3 99 aa10.32□□□□□ -0.76
SQSTM1-215ENST00000514093 MT1FP04733 61 aa10.32□□□□□ -0.76
SQSTM1-215ENST00000514093 SERF1AO75920 110 aa10.31□□□□□ -0.76
SQSTM1-215ENST00000514093 LINC00310P59036 64 aa10.31□□□□□ -0.76
SQSTM1-215ENST00000514093 APOC3P02656 99 aa10.3□□□□□ -0.76
SQSTM1-215ENST00000514093 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
SQSTM1-215ENST00000514093 YPEL4Q96NS1 127 aa10.3□□□□□ -0.76
SQSTM1-215ENST00000514093 HSPB8Q9UJY1 196 aa10.3□□□□□ -0.76
SQSTM1-215ENST00000514093 TRBV7-6A0A0J9YX20 115 aa10.29□□□□□ -0.76
SQSTM1-215ENST00000514093 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
SQSTM1-215ENST00000514093 A0A1B0GWB2 263 aa10.27□□□□□ -0.77
SQSTM1-215ENST00000514093 TIMM17BO60830 172 aa10.27□□□□□ -0.77
SQSTM1-215ENST00000514093 Q96NJ1 140 aa10.26□□□□□ -0.77
SQSTM1-215ENST00000514093 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
SQSTM1-215ENST00000514093 SNAPINO95295 136 aa10.23□□□□□ -0.77
SQSTM1-215ENST00000514093 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
SQSTM1-215ENST00000514093 TTTY13Q9BZ97 58 aa10.22□□□□□ -0.77
SQSTM1-215ENST00000514093 TRBV7-7A0A0K0K1E9 115 aa10.21□□□□□ -0.77
SQSTM1-215ENST00000514093 ZNF815PA8K554 130 aa10.21□□□□□ -0.77
SQSTM1-215ENST00000514093 F8WEM9 126 aa10.21□□□□□ -0.77
SQSTM1-215ENST00000514093 TRGC2P03986 189 aa10.21□□□□□ -0.77
SQSTM1-215ENST00000514093 A6NDN8 102 aa10.2□□□□□ -0.78
SQSTM1-215ENST00000514093 SVBPQ8N300 66 aa10.2□□□□□ -0.78
SQSTM1-215ENST00000514093 IGFL1Q6UW32 110 aa10.17□□□□□ -0.78
SQSTM1-215ENST00000514093 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-215ENST00000514093 FAM236DA0A1B0GTK5 79 aa10.15□□□□□ -0.78
SQSTM1-215ENST00000514093 A4D1N5 150 aa10.15□□□□□ -0.78
SQSTM1-215ENST00000514093 FAM236CP0DP71 79 aa10.15□□□□□ -0.78
SQSTM1-215ENST00000514093 NDUFA5Q16718 116 aa10.15□□□□□ -0.78
SQSTM1-215ENST00000514093 CLEC2BQ92478 149 aa10.15□□□□□ -0.78
SQSTM1-215ENST00000514093 C20orf166-AS1Q96NR2 134 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms