RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
CLCN3-209ENST00000513761 USP34Q70CQ2 3546 aa5.17□□□□□ -1.58
CLCN3-209ENST00000513761 USP24Q9UPU5 2620 aa5.17□□□□□ -1.58
CLCN3-209ENST00000513761 A0A096LNT2 108 aa5.17□□□□□ -1.58
CLCN3-209ENST00000513761 ZNF706Q9Y5V0 76 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-209ENST00000513761 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
CLCN3-209ENST00000513761 CFAP47Q6ZTR5 3102 aa5.16□□□□□ -1.58
CLCN3-209ENST00000513761 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
CLCN3-209ENST00000513761 ZNF292O60281 2723 aa5.15□□□□□ -1.58
CLCN3-209ENST00000513761 FLNAP21333 2647 aaKnown RBP5.15□□□□□ -1.58
CLCN3-209ENST00000513761 CIRBP-AS1Q8TBR5 109 aa5.15□□□□□ -1.58
CLCN3-209ENST00000513761 A0A0G2JQZ4 141 aa5.15□□□□□ -1.59
CLCN3-209ENST00000513761 A0A1W2PNN7 141 aa5.15□□□□□ -1.59
CLCN3-209ENST00000513761 A8MUN3 132 aa5.15□□□□□ -1.59
CLCN3-209ENST00000513761 A0A1B0GW54 56 aa5.14□□□□□ -1.59
CLCN3-209ENST00000513761 SPAG11AQ6PDA7 123 aa5.14□□□□□ -1.59
CLCN3-209ENST00000513761 Q8N377 158 aa5.14□□□□□ -1.59
CLCN3-209ENST00000513761 CHD6Q8TD26 2715 aa5.14□□□□□ -1.59
CLCN3-209ENST00000513761 TACC2O95359 2948 aa5.14□□□□□ -1.59
CLCN3-209ENST00000513761 PRR34Q9NV39 138 aa5.14□□□□□ -1.59
CLCN3-209ENST00000513761 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
CLCN3-209ENST00000513761 PHF5AQ7RTV0 110 aaKnown RBP5.12□□□□□ -1.59
CLCN3-209ENST00000513761 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
CLCN3-209ENST00000513761 H3BNG1 76 aa5.12□□□□□ -1.59
CLCN3-209ENST00000513761 LINC00612Q8N6U2 182 aa5.12□□□□□ -1.59
CLCN3-209ENST00000513761 LRBAP50851 2863 aa5.11□□□□□ -1.59
CLCN3-209ENST00000513761 ITPR3Q14573 2671 aa5.11□□□□□ -1.59
CLCN3-209ENST00000513761 TRAV22A0A0B4J277 110 aa5.11□□□□□ -1.59
CLCN3-209ENST00000513761 HECTD1Q9ULT8 2610 aa5.1□□□□□ -1.59
CLCN3-209ENST00000513761 IGLV1-50A0A075B6I6 118 aa5.1□□□□□ -1.59
CLCN3-209ENST00000513761 EPM2AB3EWF7 344 aa5.1□□□□□ -1.59
CLCN3-209ENST00000513761 CHTF8P0CG12 524 aa5.1□□□□□ -1.59
CLCN3-209ENST00000513761 LINC00588Q9Y4M8 146 aa5.1□□□□□ -1.59
CLCN3-209ENST00000513761 Q5XG85 94 aa5.09□□□□□ -1.59
CLCN3-209ENST00000513761 ATMQ13315 3056 aa5.09□□□□□ -1.59
CLCN3-209ENST00000513761 Q8NDZ9 215 aa5.09□□□□□ -1.59
CLCN3-209ENST00000513761 WDFY3Q8IZQ1 3526 aa5.09□□□□□ -1.6
CLCN3-209ENST00000513761 LOC400499M0QZD8 3231 aa5.09□□□□□ -1.6
CLCN3-209ENST00000513761 SPINK1P00995 79 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 IGFL1Q6UW32 110 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 ATRQ13535 2644 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 KRTAP10-3P60369 221 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 MOBPQ13875 183 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 DMXL2Q8TDJ6 3036 aa5.08□□□□□ -1.6
CLCN3-209ENST00000513761 GCN1Q92616 2671 aaKnown RBP5.08□□□□□ -1.6
CLCN3-209ENST00000513761 H3BPC8 53 aa5.07□□□□□ -1.6
CLCN3-209ENST00000513761 OXTP01178 125 aa5.07□□□□□ -1.6
CLCN3-209ENST00000513761 TP53AIP1Q9HCN2 124 aa5.07□□□□□ -1.6
CLCN3-209ENST00000513761 COA5Q86WW8 74 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 C16orf90A8MZG2 172 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 NBEAL2Q6ZNJ1 2754 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 A8MWP4 228 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 WIPF1O43516 503 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 DNAH10OSP0CZ25 163 aa5.06□□□□□ -1.6
CLCN3-209ENST00000513761 CR1P17927 2039 aa5.05□□□□□ -1.6
CLCN3-209ENST00000513761 LY6G6CO95867 125 aa5.05□□□□□ -1.6
CLCN3-209ENST00000513761 MGAM2Q2M2H8 2515 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 CFAP46Q8IYW2 2715 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 IGLV5-52A0A0A0MRZ9 124 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 K7ERS5 55 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 FAM229BQ4G0N7 80 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 IGKV2D-30A0A075B6S6 120 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 IGKV2-30P06310 120 aa5.04□□□□□ -1.6
CLCN3-209ENST00000513761 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
CLCN3-209ENST00000513761 FLNBO75369 2602 aaKnown RBP5.04□□□□□ -1.6
CLCN3-209ENST00000513761 ZZEF1O43149 2961 aa5.03□□□□□ -1.6
CLCN3-209ENST00000513761 A0A1B0GU69 56 aa5.03□□□□□ -1.6
CLCN3-209ENST00000513761 CASC10Q5T4H9 136 aa5.03□□□□□ -1.6
CLCN3-209ENST00000513761 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
CLCN3-209ENST00000513761 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
CLCN3-209ENST00000513761 NUPR2A6NF83 97 aa5.02□□□□□ -1.61
CLCN3-209ENST00000513761 KRTAP1-3Q8IUG1 177 aa5.02□□□□□ -1.61
CLCN3-209ENST00000513761 ACYP2P14621 99 aa5.02□□□□□ -1.61
CLCN3-209ENST00000513761 UNC79Q9P2D8 2635 aa5.01□□□□□ -1.61
CLCN3-209ENST00000513761 COL12A1Q99715 3063 aa5.01□□□□□ -1.61
CLCN3-209ENST00000513761 KRTAP10-11P60412 298 aa5□□□□□ -1.61
CLCN3-209ENST00000513761 MDFIQ99750 246 aa5□□□□□ -1.61
CLCN3-209ENST00000513761 DSCR10P59022 87 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 CYP4F30PQ9H0H9 118 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 IGLV8-61A0A075B6I0 122 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 DCHS1Q96JQ0 3298 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 ASH1LQ9NR48 2969 aaKnown RBP4.99□□□□□ -1.61
CLCN3-209ENST00000513761 KRTAP24-1Q3LI83 254 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 TLX1NBP0CAT3 122 aa4.99□□□□□ -1.61
CLCN3-209ENST00000513761 C7orf65Q6ZTY9 151 aa4.98□□□□□ -1.61
CLCN3-209ENST00000513761 TEX15Q9BXT5 2789 aa4.98□□□□□ -1.61
CLCN3-209ENST00000513761 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
CLCN3-209ENST00000513761 PLA2G2DQ9UNK4 145 aa4.98□□□□□ -1.61
CLCN3-209ENST00000513761 ATP11AUNQ6ZP68 121 aa4.97□□□□□ -1.61
CLCN3-209ENST00000513761 C8orf17Q9NRJ1 99 aa4.97□□□□□ -1.61
CLCN3-209ENST00000513761 KRTAP1-1Q07627 177 aa4.97□□□□□ -1.61
CLCN3-209ENST00000513761 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
CLCN3-209ENST00000513761 ITPR1Q14643 2758 aa4.96□□□□□ -1.61
CLCN3-209ENST00000513761 Q1T7F1 81 aa4.96□□□□□ -1.62
CLCN3-209ENST00000513761 MAST4O15021 2626 aa4.95□□□□□ -1.62
CLCN3-209ENST00000513761 C1orf134Q5TEV5 83 aa4.95□□□□□ -1.62
CLCN3-209ENST00000513761 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms