RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
PDPN-210ENST00000513143 A6NDN8 102 aa7.79□□□□□ -1.16
PDPN-210ENST00000513143 PCP4L1A6NKN8 68 aa7.79□□□□□ -1.16
PDPN-210ENST00000513143 UBE2BP63146 152 aa7.79□□□□□ -1.16
PDPN-210ENST00000513143 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
PDPN-210ENST00000513143 NHP2Q9NX24 153 aaKnown RBP7.79□□□□□ -1.16
PDPN-210ENST00000513143 RAB37Q96AX2 223 aa7.78□□□□□ -1.16
PDPN-210ENST00000513143 KCNQ1DNQ9H478 68 aa7.78□□□□□ -1.16
PDPN-210ENST00000513143 PRO1854Q9UHT4 67 aa7.78□□□□□ -1.16
PDPN-210ENST00000513143 CBY1Q9Y3M2 126 aa7.77□□□□□ -1.17
PDPN-210ENST00000513143 HSPG2P98160 4391 aa7.76□□□□□ -1.17
PDPN-210ENST00000513143 TRAV23DV6A0A075B6W5 121 aa7.76□□□□□ -1.17
PDPN-210ENST00000513143 PRYO14603 147 aa7.76□□□□□ -1.17
PDPN-210ENST00000513143 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
PDPN-210ENST00000513143 RPL13AP40429 203 aaKnown RBP7.76□□□□□ -1.17
PDPN-210ENST00000513143 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
PDPN-210ENST00000513143 RYR1P21817 5038 aa7.75□□□□□ -1.17
PDPN-210ENST00000513143 K7ERJ3 54 aa7.75□□□□□ -1.17
PDPN-210ENST00000513143 SPRR1AP35321 89 aa7.75□□□□□ -1.17
PDPN-210ENST00000513143 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
PDPN-210ENST00000513143 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
PDPN-210ENST00000513143 BATFQ16520 125 aa7.74□□□□□ -1.17
PDPN-210ENST00000513143 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
PDPN-210ENST00000513143 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
PDPN-210ENST00000513143 FAT1Q14517 4588 aa7.73□□□□□ -1.17
PDPN-210ENST00000513143 KRTAP4-8A0A0G2JLE6 195 aa7.73□□□□□ -1.17
PDPN-210ENST00000513143 KRTAP4-16G5E9R7 235 aaPredicted RBP7.73□□□□□ -1.17
PDPN-210ENST00000513143 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
PDPN-210ENST00000513143 SNHG12Q9BXW3 62 aa7.73□□□□□ -1.17
PDPN-210ENST00000513143 H7C2G1 150 aa7.72□□□□□ -1.17
PDPN-210ENST00000513143 BCE1O60756 84 aa7.72□□□□□ -1.17
PDPN-210ENST00000513143 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
PDPN-210ENST00000513143 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
PDPN-210ENST00000513143 C6orf99Q4VX62 202 aa7.71□□□□□ -1.18
PDPN-210ENST00000513143 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
PDPN-210ENST00000513143 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
PDPN-210ENST00000513143 TSPAN13O95857 204 aa7.7□□□□□ -1.18
PDPN-210ENST00000513143 VPS13BQ7Z7G8 4022 aa7.7□□□□□ -1.18
PDPN-210ENST00000513143 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
PDPN-210ENST00000513143 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
PDPN-210ENST00000513143 B5MCH6 92 aa7.69□□□□□ -1.18
PDPN-210ENST00000513143 Q1RN00 199 aa7.69□□□□□ -1.18
PDPN-210ENST00000513143 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
PDPN-210ENST00000513143 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
PDPN-210ENST00000513143 FAM19A1Q7Z5A9 133 aa7.68□□□□□ -1.18
PDPN-210ENST00000513143 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
PDPN-210ENST00000513143 H0Y9J4 135 aa7.67□□□□□ -1.18
PDPN-210ENST00000513143 ELOF1P60002 83 aaKnown RBP7.67□□□□□ -1.18
PDPN-210ENST00000513143 Q8N1X5 172 aa7.67□□□□□ -1.18
PDPN-210ENST00000513143 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
PDPN-210ENST00000513143 TRIAP1O43715 76 aa7.66□□□□□ -1.18
PDPN-210ENST00000513143 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
PDPN-210ENST00000513143 COX7BP24311 80 aa7.66□□□□□ -1.18
PDPN-210ENST00000513143 UBE2AP49459 152 aa7.66□□□□□ -1.18
PDPN-210ENST00000513143 PRLHP81277 87 aa7.66□□□□□ -1.18
PDPN-210ENST00000513143 VAMP3Q15836 100 aa7.66□□□□□ -1.18
PDPN-210ENST00000513143 Q6ZRX8 168 aa7.66□□□□□ -1.18
PDPN-210ENST00000513143 TAX1BP3O14907 124 aa7.65□□□□□ -1.18
PDPN-210ENST00000513143 ZNF861PO60384 105 aa7.65□□□□□ -1.18
PDPN-210ENST00000513143 PSMB2P49721 201 aa7.65□□□□□ -1.18
PDPN-210ENST00000513143 COL5A1-AS1Q5SY13 56 aa7.65□□□□□ -1.18
PDPN-210ENST00000513143 Q5VSD8 79 aa7.65□□□□□ -1.18
PDPN-210ENST00000513143 H0YGX0 51 aa7.63□□□□□ -1.19
PDPN-210ENST00000513143 Q9BRP9 147 aa7.63□□□□□ -1.19
PDPN-210ENST00000513143 C9orf118A6NHY6 69 aa7.62□□□□□ -1.19
PDPN-210ENST00000513143 COX6CP09669 75 aa7.62□□□□□ -1.19
PDPN-210ENST00000513143 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
PDPN-210ENST00000513143 SMCR5Q8TEV8 140 aa7.62□□□□□ -1.19
PDPN-210ENST00000513143 LINC00575Q6W349 94 aa7.61□□□□□ -1.19
PDPN-210ENST00000513143 NAA38Q9BRA0 125 aaKnown RBP7.61□□□□□ -1.19
PDPN-210ENST00000513143 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
PDPN-210ENST00000513143 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
PDPN-210ENST00000513143 H3BUT2 72 aa7.6□□□□□ -1.19
PDPN-210ENST00000513143 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
PDPN-210ENST00000513143 ERC2-IT1O76042 136 aa7.59□□□□□ -1.19
PDPN-210ENST00000513143 SCGB1C2P0DMR2 95 aa7.59□□□□□ -1.19
PDPN-210ENST00000513143 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
PDPN-210ENST00000513143 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
PDPN-210ENST00000513143 hADV29S1A0JD25 119 aa7.58□□□□□ -1.2
PDPN-210ENST00000513143 SLC25A20O43772 301 aa7.58□□□□□ -1.2
PDPN-210ENST00000513143 CLEC2BQ92478 149 aa7.58□□□□□ -1.2
PDPN-210ENST00000513143 HERC2O95714 4834 aa7.58□□□□□ -1.2
PDPN-210ENST00000513143 A0A1B0GX51 115 aa7.57□□□□□ -1.2
PDPN-210ENST00000513143 LYRM7Q5U5X0 104 aa7.57□□□□□ -1.2
PDPN-210ENST00000513143 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
PDPN-210ENST00000513143 SNCGO76070 127 aa7.55□□□□□ -1.2
PDPN-210ENST00000513143 LST1O00453 97 aa7.54□□□□□ -1.2
PDPN-210ENST00000513143 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
PDPN-210ENST00000513143 TCL1BO95988 128 aa7.53□□□□□ -1.2
PDPN-210ENST00000513143 FABP2P12104 132 aa7.53□□□□□ -1.2
PDPN-210ENST00000513143 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
PDPN-210ENST00000513143 ST20-AS1Q8NBB2 130 aa7.53□□□□□ -1.2
PDPN-210ENST00000513143 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
PDPN-210ENST00000513143 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
PDPN-210ENST00000513143 TRBV20-1A0A075B6N2 111 aa7.52□□□□□ -1.2
PDPN-210ENST00000513143 TRACP01848 142 aa7.52□□□□□ -1.2
PDPN-210ENST00000513143 ATXN8Q156A1 80 aa7.52□□□□□ -1.2
PDPN-210ENST00000513143 Q6ZQY7 126 aa7.52□□□□□ -1.2
PDPN-210ENST00000513143 SPRR4Q96PI1 79 aa7.52□□□□□ -1.2
PDPN-210ENST00000513143 IGLV5-48A0A075B6I7 105 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms