RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 M0R378 163 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 RPL35P42766 123 aaKnown RBP1.03□□□□□ -2.24
CHD1-210ENST00000513064 Q0VG73 95 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 LELP1Q5T871 98 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 EIF5AL1Q6IS14 154 aaKnown RBP1.03□□□□□ -2.24
CHD1-210ENST00000513064 Q86TA4 180 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 AKAP14Q86UN6 197 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 LYSTQ99698 3801 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 IMUPQ9GZP8 106 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 CYSTM1Q9H1C7 97 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 MANBALQ9NQG1 85 aa1.03□□□□□ -2.24
CHD1-210ENST00000513064 CSMD3Q7Z407 3707 aa1.03□□□□□ -2.25
CHD1-210ENST00000513064 KMT2AQ03164 3969 aa1.03□□□□□ -2.25
CHD1-210ENST00000513064 STARD9Q9P2P6 4700 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 TRBV7-3A0A075B6L6 115 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 A0A087WTM6 91 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 IGHV1-24A0A0C4DH33 117 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 F8W036 122 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 RNASE3P12724 160 aaKnown RBP1.02□□□□□ -2.25
CHD1-210ENST00000513064 FCER1GP30273 86 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 CRIP1P50238 77 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 RAB4BP61018 213 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 PKIAP61925 76 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 ADIRFQ15847 76 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 ALKAL2Q6UX46 152 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 OR10AG1Q8NH19 301 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 AP1S3Q96PC3 154 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 RETNLBQ9BQ08 111 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 SMIM7Q9BQ49 75 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 TMEM126AQ9H061 195 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 ST20Q9HBF5 79 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 FRAS1Q86XX4 4008 aa1.02□□□□□ -2.25
CHD1-210ENST00000513064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
CHD1-210ENST00000513064 TRBV6-8A0A0A6YYG3 113 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.01□□□□□ -2.25
CHD1-210ENST00000513064 TRBV6-1A0A0K0K1D8 114 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 ZNF727A8MUV8 499 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 F2Z2F3 143 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 K7EP13 123 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 TIMM17BO60830 172 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 BCL2P10415 239 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 CKS2P33552 79 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 UBE2D3P61077 147 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 UBE2D2P62837 147 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 UBE2BP63146 152 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 PEA15Q15121 130 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 TDRG1Q3Y452 100 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 LINC01556Q5JQF7 62 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 Q5VSD8 79 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 MRPL54Q6P161 138 aaKnown RBP1.01□□□□□ -2.25
CHD1-210ENST00000513064 LINC00269Q8N2A0 174 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 Q8N814 137 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 RPL39LQ96EH5 51 aaKnown RBP1.01□□□□□ -2.25
CHD1-210ENST00000513064 TCEAL7Q9BRU2 100 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 NIT2Q9NQR4 276 aa1.01□□□□□ -2.25
CHD1-210ENST00000513064 DMBT1Q9UGM3 2413 aaPredicted RBP1□□□□□ -2.25
CHD1-210ENST00000513064 TRAV13-1A0A0B4J241 112 aa1□□□□□ -2.25
CHD1-210ENST00000513064 TRBV10-1A0A0K0K1A3 114 aa1□□□□□ -2.25
CHD1-210ENST00000513064 A0A1B0GUT8 65 aa1□□□□□ -2.25
CHD1-210ENST00000513064 HIGD1CA8MV81 97 aa1□□□□□ -2.25
CHD1-210ENST00000513064 I3L3M4 83 aa1□□□□□ -2.25
CHD1-210ENST00000513064 NCR2O95944 276 aa1□□□□□ -2.25
CHD1-210ENST00000513064 CXCL1P09341 107 aa1□□□□□ -2.25
CHD1-210ENST00000513064 FOXA3P55318 350 aaPredicted RBP1□□□□□ -2.25
CHD1-210ENST00000513064 NDUFA6P56556 154 aa1□□□□□ -2.25
CHD1-210ENST00000513064 RPL37AP61513 92 aaKnown RBP1□□□□□ -2.25
CHD1-210ENST00000513064 WFDC2Q14508 124 aa1□□□□□ -2.25
CHD1-210ENST00000513064 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
CHD1-210ENST00000513064 TEX261Q6UWH6 196 aa1□□□□□ -2.25
CHD1-210ENST00000513064 ENHOQ6UWT2 76 aa1□□□□□ -2.25
CHD1-210ENST00000513064 UNQ6190/PRO20217Q6UXQ8 127 aa1□□□□□ -2.25
CHD1-210ENST00000513064 C5orf38Q86SI9 138 aa1□□□□□ -2.25
CHD1-210ENST00000513064 TCTE3Q8IZS6 198 aa1□□□□□ -2.25
CHD1-210ENST00000513064 LINC00526Q96FQ7 95 aa1□□□□□ -2.25
CHD1-210ENST00000513064 TMEM242Q9NWH2 141 aa1□□□□□ -2.25
CHD1-210ENST00000513064 TOMM7Q9P0U1 55 aa1□□□□□ -2.25
CHD1-210ENST00000513064 FAT2Q9NYQ8 4349 aa1□□□□□ -2.25
CHD1-210ENST00000513064 RYR2Q92736 4967 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 DYNC1H1Q14204 4646 aaKnown RBP0.99□□□□□ -2.25
CHD1-210ENST00000513064 DNAH11Q96DT5 4516 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 IGKV3D-7A0A0C4DH55 119 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 LINC00959A0A1B0GUT2 108 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 C7orf77A4D0Y5 90 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 K7ERJ3 54 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 M0QY20 66 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 CCL25O15444 150 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 PPP1R17O96001 155 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 MT-ND4LP03901 98 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 MT-ND6P03923 174 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 S100A8P05109 93 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 BAALC-AS2P0C853 105 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 IGLC6P0CF74 106 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 LINC00694P0DN24 101 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 COX6A2Q02221 97 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 C9orf62Q8N4C0 152 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 TSKUQ8WUA8 353 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 PRELID3AQ96N28 172 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 TMEM70Q9BUB7 260 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 TMEM191AQ9H0A3 160 aa0.99□□□□□ -2.25
CHD1-210ENST00000513064 SMCO4Q9NRQ5 59 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms