RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 UBE2D4Q9Y2X8 147 aa2.08□□□□□ -2.08
CHD1-209ENST00000512844 URB1O60287 2271 aaKnown RBP2.08□□□□□ -2.08
CHD1-209ENST00000512844 WDR87Q6ZQQ6 2873 aa2.08□□□□□ -2.08
CHD1-209ENST00000512844 CADP27708 2225 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 H3BUX3 64 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 M0R2N4 97 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 INE1O15225 51 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 SPAG11BQ08648 103 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 SPINK13Q1W4C9 94 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 Q5VV11 94 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
CHD1-209ENST00000512844 MUC4Q99102 2169 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.06□□□□□ -2.08
CHD1-209ENST00000512844 IGKV2-29A2NJV5 120 aaPredicted RBP2.06□□□□□ -2.08
CHD1-209ENST00000512844 LINC00158P58513 81 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 RPL37AP61513 92 aaKnown RBP2.06□□□□□ -2.08
CHD1-209ENST00000512844 BPESC1Q9GZL8 116 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 CDKN2A-AS1Q9UH64 79 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 UTRNP46939 3433 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 ZGRF1Q86YA3 2104 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
CHD1-209ENST00000512844 RP1L1Q8IWN7 2480 aaPredicted RBP2.06□□□□□ -2.08
CHD1-209ENST00000512844 ABCA1O95477 2261 aa2.05□□□□□ -2.08
CHD1-209ENST00000512844 TPRP12270 2363 aaKnown RBP2.05□□□□□ -2.08
CHD1-209ENST00000512844 ANKHD1Q8IWZ3 2542 aaKnown RBP2.05□□□□□ -2.08
CHD1-209ENST00000512844 LOC101927531A0A1B0GV80 90 aa2.05□□□□□ -2.08
CHD1-209ENST00000512844 A8MTW9 85 aa2.05□□□□□ -2.08
CHD1-209ENST00000512844 HTN1P15515 57 aa2.05□□□□□ -2.08
CHD1-209ENST00000512844 DEFB131AP59861 70 aa2.05□□□□□ -2.08
CHD1-209ENST00000512844 ZNF625Q96I27 306 aaPredicted RBP2.05□□□□□ -2.08
CHD1-209ENST00000512844 CCL19Q99731 98 aa2.05□□□□□ -2.08
CHD1-209ENST00000512844 TRGV1A0A0A0MS02 117 aa2.04□□□□□ -2.08
CHD1-209ENST00000512844 COX17Q14061 63 aa2.04□□□□□ -2.08
CHD1-209ENST00000512844 TOMM7Q9P0U1 55 aa2.04□□□□□ -2.08
CHD1-209ENST00000512844 ICE1Q9Y2F5 2266 aa2.04□□□□□ -2.08
CHD1-209ENST00000512844 PKDREJQ9NTG1 2253 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 TECTAO75443 2155 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 ARFGEF3Q5TH69 2177 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 LOC110117498A0A087WWA1 95 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 IGKV3D-7A0A0C4DH55 119 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 SMIM11BQ8TCY0 68 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 DEFB104AQ8WTQ1 72 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 OBSCN-AS1Q96MR7 158 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 WNK2Q9Y3S1 2297 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 C5orf42Q9H799 3197 aa2.03□□□□□ -2.08
CHD1-209ENST00000512844 BRCA2P51587 3418 aa2.03□□□□□ -2.09
CHD1-209ENST00000512844 UQCR11O14957 56 aa2.02□□□□□ -2.09
CHD1-209ENST00000512844 DEFB1P60022 68 aa2.02□□□□□ -2.09
CHD1-209ENST00000512844 Q8IZM0 81 aa2.02□□□□□ -2.09
CHD1-209ENST00000512844 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
CHD1-209ENST00000512844 LINC00846Q9NV44 126 aa2.02□□□□□ -2.09
CHD1-209ENST00000512844 MAP1BP46821 2468 aaKnown RBP2.02□□□□□ -2.09
CHD1-209ENST00000512844 NCOR1O75376 2440 aa2.02□□□□□ -2.09
CHD1-209ENST00000512844 ROS1P08922 2347 aa2.01□□□□□ -2.09
CHD1-209ENST00000512844 CACNA1BQ00975 2339 aa2.01□□□□□ -2.09
CHD1-209ENST00000512844 F8WEM9 126 aa2.01□□□□□ -2.09
CHD1-209ENST00000512844 NCR3O14931 201 aa2.01□□□□□ -2.09
CHD1-209ENST00000512844 CCL18P55774 89 aa2.01□□□□□ -2.09
CHD1-209ENST00000512844 CEP250Q9BV73 2442 aa2.01□□□□□ -2.09
CHD1-209ENST00000512844 ABCA4P78363 2273 aa2□□□□□ -2.09
CHD1-209ENST00000512844 IGKV3OR2-268A0A0C4DH90 116 aa2□□□□□ -2.09
CHD1-209ENST00000512844 HAMPP81172 84 aa2□□□□□ -2.09
CHD1-209ENST00000512844 COX6A2Q02221 97 aa2□□□□□ -2.09
CHD1-209ENST00000512844 DEFB112Q30KQ8 113 aa2□□□□□ -2.09
CHD1-209ENST00000512844 ENHOQ6UWT2 76 aa2□□□□□ -2.09
CHD1-209ENST00000512844 ZFHX2Q9C0A1 2572 aaPredicted RBP2□□□□□ -2.09
CHD1-209ENST00000512844 A0A087WVE0 104 aa1.99□□□□□ -2.09
CHD1-209ENST00000512844 LINC00959A0A1B0GUT2 108 aa1.99□□□□□ -2.09
CHD1-209ENST00000512844 DEFB114Q30KQ6 69 aa1.99□□□□□ -2.09
CHD1-209ENST00000512844 LINC00575Q6W349 94 aa1.99□□□□□ -2.09
CHD1-209ENST00000512844 NOP10Q9NPE3 64 aaKnown RBP1.99□□□□□ -2.09
CHD1-209ENST00000512844 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
CHD1-209ENST00000512844 SPTA1P02549 2419 aa1.99□□□□□ -2.09
CHD1-209ENST00000512844 LAMA2P24043 3122 aaKnown RBP1.99□□□□□ -2.09
CHD1-209ENST00000512844 MKI67P46013 3256 aaKnown RBP1.99□□□□□ -2.09
CHD1-209ENST00000512844 NDUFB1O75438 58 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 COX7BP24311 80 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 NREPQ16612 68 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 Q6ZQY7 126 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 PRO0255Q9UI72 69 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 BAHCC1Q9P281 2608 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 CACNA1HO95180 2353 aa1.98□□□□□ -2.09
CHD1-209ENST00000512844 APC2O95996 2303 aa1.97□□□□□ -2.09
CHD1-209ENST00000512844 ACACAQ13085 2346 aa1.97□□□□□ -2.09
CHD1-209ENST00000512844 MUC6Q6W4X9 2439 aa1.97□□□□□ -2.09
CHD1-209ENST00000512844 NBDYA0A0U1RRE5 68 aa1.97□□□□□ -2.09
CHD1-209ENST00000512844 PRR15LQ9BU68 103 aa1.97□□□□□ -2.09
CHD1-209ENST00000512844 PTPRZ1P23471 2315 aaPredicted RBP1.97□□□□□ -2.09
CHD1-209ENST00000512844 SPTBN2O15020 2390 aa1.96□□□□□ -2.09
CHD1-209ENST00000512844 ARHGAP32A7KAX9 2087 aa1.96□□□□□ -2.1
CHD1-209ENST00000512844 GVQW2A0A096LPI5 108 aaPredicted RBP1.96□□□□□ -2.1
CHD1-209ENST00000512844 ANGP03950 147 aaKnown RBP1.96□□□□□ -2.1
CHD1-209ENST00000512844 DEFB136Q30KP8 78 aa1.96□□□□□ -2.1
CHD1-209ENST00000512844 CNOT1A5YKK6 2376 aaKnown RBP1.96□□□□□ -2.1
CHD1-209ENST00000512844 PIEZO2Q9H5I5 2752 aa1.96□□□□□ -2.1
CHD1-209ENST00000512844 LAMA1P25391 3075 aa1.96□□□□□ -2.1
CHD1-209ENST00000512844 PRRC2CQ9Y520 2896 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 587.8 ms