RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 BCE1O60756 84 aa9.3□□□□□ -0.92
SQSTM1-214ENST00000512234 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
SQSTM1-214ENST00000512234 TMEM126AQ9H061 195 aa9.3□□□□□ -0.92
SQSTM1-214ENST00000512234 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
SQSTM1-214ENST00000512234 PRLHP81277 87 aa9.29□□□□□ -0.92
SQSTM1-214ENST00000512234 GTF2H5Q6ZYL4 71 aa9.29□□□□□ -0.92
SQSTM1-214ENST00000512234 TIMM17BO60830 172 aa9.28□□□□□ -0.92
SQSTM1-214ENST00000512234 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
SQSTM1-214ENST00000512234 Q6ZVH6 145 aa9.28□□□□□ -0.92
SQSTM1-214ENST00000512234 ZNF861PO60384 105 aa9.27□□□□□ -0.93
SQSTM1-214ENST00000512234 H0Y9J4 135 aa9.26□□□□□ -0.93
SQSTM1-214ENST00000512234 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
SQSTM1-214ENST00000512234 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
SQSTM1-214ENST00000512234 UBE2AP49459 152 aa9.25□□□□□ -0.93
SQSTM1-214ENST00000512234 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
SQSTM1-214ENST00000512234 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
SQSTM1-214ENST00000512234 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
SQSTM1-214ENST00000512234 TNXBP22105 4242 aa9.24□□□□□ -0.93
SQSTM1-214ENST00000512234 OXTP01178 125 aa9.24□□□□□ -0.93
SQSTM1-214ENST00000512234 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
SQSTM1-214ENST00000512234 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
SQSTM1-214ENST00000512234 SPANXCQ9NY87 97 aa9.24□□□□□ -0.93
SQSTM1-214ENST00000512234 ANAPC11Q9NYG5 84 aa9.24□□□□□ -0.93
SQSTM1-214ENST00000512234 K7EP34 96 aa9.23□□□□□ -0.93
SQSTM1-214ENST00000512234 NDUFC2O95298 119 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 CEND1Q8N111 149 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 A0A1W2PPM0 123 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 KCNQ1DNQ9H478 68 aa9.22□□□□□ -0.93
SQSTM1-214ENST00000512234 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.94
SQSTM1-214ENST00000512234 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.94
SQSTM1-214ENST00000512234 PRR26Q8N8Z3 221 aa9.21□□□□□ -0.94
SQSTM1-214ENST00000512234 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
SQSTM1-214ENST00000512234 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
SQSTM1-214ENST00000512234 FABP2P12104 132 aa9.2□□□□□ -0.94
SQSTM1-214ENST00000512234 H3BUT2 72 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 K7ERU9 68 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 PRYO14603 147 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 OCIAD2Q56VL3 154 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 HIGD2AQ9BW72 106 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 FXYD2P54710 66 aa9.19□□□□□ -0.94
SQSTM1-214ENST00000512234 SPRR1AP35321 89 aa9.18□□□□□ -0.94
SQSTM1-214ENST00000512234 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
SQSTM1-214ENST00000512234 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
SQSTM1-214ENST00000512234 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
SQSTM1-214ENST00000512234 SPCS1Q9Y6A9 102 aa9.17□□□□□ -0.94
SQSTM1-214ENST00000512234 IFITM1P13164 125 aa9.16□□□□□ -0.94
SQSTM1-214ENST00000512234 A6NJY4 79 aa9.15□□□□□ -0.94
SQSTM1-214ENST00000512234 B5MCH6 92 aa9.15□□□□□ -0.94
SQSTM1-214ENST00000512234 HIST1H4GQ99525 98 aa9.15□□□□□ -0.94
SQSTM1-214ENST00000512234 A0A087X002 238 aa9.14□□□□□ -0.95
SQSTM1-214ENST00000512234 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
SQSTM1-214ENST00000512234 ZNF73O43830 326 aaPredicted RBP9.14□□□□□ -0.95
SQSTM1-214ENST00000512234 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
SQSTM1-214ENST00000512234 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
SQSTM1-214ENST00000512234 A4D1N5 150 aa9.13□□□□□ -0.95
SQSTM1-214ENST00000512234 RAB37Q96AX2 223 aa9.13□□□□□ -0.95
SQSTM1-214ENST00000512234 Q9BRP9 147 aa9.13□□□□□ -0.95
SQSTM1-214ENST00000512234 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
SQSTM1-214ENST00000512234 F8W1H4 67 aa9.1□□□□□ -0.95
SQSTM1-214ENST00000512234 C6orf99Q4VX62 202 aa9.09□□□□□ -0.95
SQSTM1-214ENST00000512234 Q6ZRX8 168 aa9.09□□□□□ -0.95
SQSTM1-214ENST00000512234 COPS9Q8WXC6 57 aa9.09□□□□□ -0.95
SQSTM1-214ENST00000512234 KRTAP13-2Q52LG2 175 aa9.08□□□□□ -0.96
SQSTM1-214ENST00000512234 LYRM7Q5U5X0 104 aa9.08□□□□□ -0.96
SQSTM1-214ENST00000512234 K7ERJ3 54 aa9.07□□□□□ -0.96
SQSTM1-214ENST00000512234 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
SQSTM1-214ENST00000512234 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
SQSTM1-214ENST00000512234 VPS25Q9BRG1 176 aa9.07□□□□□ -0.96
SQSTM1-214ENST00000512234 NAA38Q9BRA0 125 aaKnown RBP9.06□□□□□ -0.96
SQSTM1-214ENST00000512234 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
SQSTM1-214ENST00000512234 GAGE2AQ6NT46 116 aa9.05□□□□□ -0.96
SQSTM1-214ENST00000512234 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
SQSTM1-214ENST00000512234 CRYGAP11844 174 aa9.04□□□□□ -0.96
SQSTM1-214ENST00000512234 HMCN2Q8NDA2 5059 aa9.03□□□□□ -0.96
SQSTM1-214ENST00000512234 TRAV13-2A0A0B4J235 113 aa9.03□□□□□ -0.96
SQSTM1-214ENST00000512234 J3QR89 54 aa9.03□□□□□ -0.96
SQSTM1-214ENST00000512234 COX7BP24311 80 aa9.03□□□□□ -0.96
SQSTM1-214ENST00000512234 H7C2G1 150 aa9.02□□□□□ -0.96
SQSTM1-214ENST00000512234 RPL13AP40429 203 aaKnown RBP9.02□□□□□ -0.96
SQSTM1-214ENST00000512234 CFC1BP0CG36 223 aa9.02□□□□□ -0.97
SQSTM1-214ENST00000512234 CFC1P0CG37 223 aa9.02□□□□□ -0.97
SQSTM1-214ENST00000512234 ELOF1P60002 83 aaKnown RBP9.02□□□□□ -0.97
SQSTM1-214ENST00000512234 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
SQSTM1-214ENST00000512234 TRBV20-1A0A075B6N2 111 aa9□□□□□ -0.97
SQSTM1-214ENST00000512234 PRO0461Q9UI25 63 aa9□□□□□ -0.97
SQSTM1-214ENST00000512234 TSPAN13O95857 204 aa8.99□□□□□ -0.97
SQSTM1-214ENST00000512234 A0A0B4J2C4 111 aa8.98□□□□□ -0.97
SQSTM1-214ENST00000512234 FAM229BQ4G0N7 80 aa8.98□□□□□ -0.97
SQSTM1-214ENST00000512234 H3BMG7 143 aa8.97□□□□□ -0.97
SQSTM1-214ENST00000512234 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
SQSTM1-214ENST00000512234 IGLV9-49A0A0B4J1Y8 123 aa8.97□□□□□ -0.97
SQSTM1-214ENST00000512234 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
SQSTM1-214ENST00000512234 PRO1854Q9UHT4 67 aa8.97□□□□□ -0.97
SQSTM1-214ENST00000512234 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms