RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
SH3TC1-220ENST00000511002 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
SH3TC1-220ENST00000511002 OR13C6PQ8NH95 151 aa9.42□□□□□ -0.9
SH3TC1-220ENST00000511002 A4D1N5 150 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 ZNF861PO60384 105 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 SPRR1AP35321 89 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 UBE2AP49459 152 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 PRLHP81277 87 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 LINC00518Q8N0U6 118 aa9.41□□□□□ -0.9
SH3TC1-220ENST00000511002 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
SH3TC1-220ENST00000511002 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
SH3TC1-220ENST00000511002 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
SH3TC1-220ENST00000511002 H0Y9J4 135 aa9.38□□□□□ -0.91
SH3TC1-220ENST00000511002 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
SH3TC1-220ENST00000511002 DIRC1Q969H9 104 aa9.38□□□□□ -0.91
SH3TC1-220ENST00000511002 C12orf57Q99622 126 aa9.38□□□□□ -0.91
SH3TC1-220ENST00000511002 PRO1933Q9H354 126 aa9.38□□□□□ -0.91
SH3TC1-220ENST00000511002 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
SH3TC1-220ENST00000511002 ETDCA0A1B0GVM5 59 aa9.37□□□□□ -0.91
SH3TC1-220ENST00000511002 A6NDN8 102 aa9.37□□□□□ -0.91
SH3TC1-220ENST00000511002 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
SH3TC1-220ENST00000511002 TAL2Q16559 108 aa9.35□□□□□ -0.91
SH3TC1-220ENST00000511002 TRAV13-2A0A0B4J235 113 aa9.34□□□□□ -0.91
SH3TC1-220ENST00000511002 B5MCH6 92 aa9.34□□□□□ -0.91
SH3TC1-220ENST00000511002 CEND1Q8N111 149 aa9.34□□□□□ -0.91
SH3TC1-220ENST00000511002 HSD52Q0P140 79 aa9.33□□□□□ -0.92
SH3TC1-220ENST00000511002 HIGD2AQ9BW72 106 aa9.33□□□□□ -0.92
SH3TC1-220ENST00000511002 CBY1Q9Y3M2 126 aa9.33□□□□□ -0.92
SH3TC1-220ENST00000511002 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
SH3TC1-220ENST00000511002 RPL13AP40429 203 aaKnown RBP9.31□□□□□ -0.92
SH3TC1-220ENST00000511002 FXYD2P54710 66 aa9.31□□□□□ -0.92
SH3TC1-220ENST00000511002 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
SH3TC1-220ENST00000511002 Q6ZRX8 168 aa9.31□□□□□ -0.92
SH3TC1-220ENST00000511002 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
SH3TC1-220ENST00000511002 CFC1P0CG37 223 aa9.3□□□□□ -0.92
SH3TC1-220ENST00000511002 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
SH3TC1-220ENST00000511002 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
SH3TC1-220ENST00000511002 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
SH3TC1-220ENST00000511002 Q9BRP9 147 aa9.29□□□□□ -0.92
SH3TC1-220ENST00000511002 A0A0B4J2C4 111 aa9.27□□□□□ -0.93
SH3TC1-220ENST00000511002 TMEM238LA0A1B0GVL6 79 aa9.27□□□□□ -0.93
SH3TC1-220ENST00000511002 A6NJY4 79 aa9.27□□□□□ -0.93
SH3TC1-220ENST00000511002 ERC2-IT1O76042 136 aa9.27□□□□□ -0.93
SH3TC1-220ENST00000511002 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
SH3TC1-220ENST00000511002 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
SH3TC1-220ENST00000511002 COX7BP24311 80 aa9.26□□□□□ -0.93
SH3TC1-220ENST00000511002 ELOF1P60002 83 aaKnown RBP9.26□□□□□ -0.93
SH3TC1-220ENST00000511002 H7C2G1 150 aa9.25□□□□□ -0.93
SH3TC1-220ENST00000511002 ANAPC11Q9NYG5 84 aa9.25□□□□□ -0.93
SH3TC1-220ENST00000511002 TSTD3H0UI37 97 aa9.24□□□□□ -0.93
SH3TC1-220ENST00000511002 TRBV7-6A0A0J9YX20 115 aa9.23□□□□□ -0.93
SH3TC1-220ENST00000511002 K7ERJ3 54 aa9.23□□□□□ -0.93
SH3TC1-220ENST00000511002 CTAG1AP78358 180 aa9.23□□□□□ -0.93
SH3TC1-220ENST00000511002 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
SH3TC1-220ENST00000511002 NHP2Q9NX24 153 aaKnown RBP9.23□□□□□ -0.93
SH3TC1-220ENST00000511002 A0A1B0GWB2 263 aa9.22□□□□□ -0.93
SH3TC1-220ENST00000511002 BVES-AS1Q5T3Y7 98 aa9.22□□□□□ -0.93
SH3TC1-220ENST00000511002 LRP2P98164 4655 aa9.22□□□□□ -0.93
SH3TC1-220ENST00000511002 A0A087X002 238 aa9.21□□□□□ -0.94
SH3TC1-220ENST00000511002 PRO1854Q9UHT4 67 aa9.21□□□□□ -0.94
SH3TC1-220ENST00000511002 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
SH3TC1-220ENST00000511002 ZNF706Q9Y5V0 76 aaPredicted RBP9.2□□□□□ -0.94
SH3TC1-220ENST00000511002 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
SH3TC1-220ENST00000511002 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
SH3TC1-220ENST00000511002 Q1RN00 199 aa9.18□□□□□ -0.94
SH3TC1-220ENST00000511002 VAMP3Q15836 100 aa9.17□□□□□ -0.94
SH3TC1-220ENST00000511002 FAM229BQ4G0N7 80 aa9.17□□□□□ -0.94
SH3TC1-220ENST00000511002 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
SH3TC1-220ENST00000511002 M0R143 59 aa9.16□□□□□ -0.94
SH3TC1-220ENST00000511002 CRYGAP11844 174 aa9.16□□□□□ -0.94
SH3TC1-220ENST00000511002 KRTAP13-2Q52LG2 175 aa9.16□□□□□ -0.94
SH3TC1-220ENST00000511002 LINC00483Q53H64 154 aa9.16□□□□□ -0.94
SH3TC1-220ENST00000511002 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
SH3TC1-220ENST00000511002 TSPAN13O95857 204 aa9.13□□□□□ -0.95
SH3TC1-220ENST00000511002 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
SH3TC1-220ENST00000511002 TRIAP1O43715 76 aa9.12□□□□□ -0.95
SH3TC1-220ENST00000511002 SLC25A20O43772 301 aa9.11□□□□□ -0.95
SH3TC1-220ENST00000511002 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
SH3TC1-220ENST00000511002 LPAP08519 4548 aa9.1□□□□□ -0.95
SH3TC1-220ENST00000511002 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
SH3TC1-220ENST00000511002 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
SH3TC1-220ENST00000511002 hADV29S1A0JD25 119 aa9.09□□□□□ -0.95
SH3TC1-220ENST00000511002 SPRR1BP22528 89 aa9.09□□□□□ -0.95
SH3TC1-220ENST00000511002 PSMB2P49721 201 aa9.09□□□□□ -0.95
SH3TC1-220ENST00000511002 LINC01547P58512 204 aaPredicted RBP9.09□□□□□ -0.95
SH3TC1-220ENST00000511002 BATFQ16520 125 aa9.09□□□□□ -0.95
SH3TC1-220ENST00000511002 H0YGX0 51 aa9.08□□□□□ -0.96
SH3TC1-220ENST00000511002 IGLV5-48A0A075B6I7 105 aa9.07□□□□□ -0.96
SH3TC1-220ENST00000511002 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
SH3TC1-220ENST00000511002 Q6ZQY7 126 aa9.07□□□□□ -0.96
SH3TC1-220ENST00000511002 CLEC2BQ92478 149 aa9.06□□□□□ -0.96
SH3TC1-220ENST00000511002 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
SH3TC1-220ENST00000511002 MOBPQ13875 183 aa9.05□□□□□ -0.96
SH3TC1-220ENST00000511002 Q8N377 158 aa9.04□□□□□ -0.96
SH3TC1-220ENST00000511002 NAA38Q9BRA0 125 aaKnown RBP9.04□□□□□ -0.96
SH3TC1-220ENST00000511002 C9orf153Q5TBE3 101 aa9.03□□□□□ -0.96
SH3TC1-220ENST00000511002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
SH3TC1-220ENST00000511002 SMIM29Q86T20 159 aa9.03□□□□□ -0.96
SH3TC1-220ENST00000511002 COX6CP09669 75 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms