RNA–Protein interactions for RNA: ENST00000510721.1

PAPD4-213, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-213ENST00000510721 VAMP8Q9BV40 100 aa-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 MTORP42345 2549 aa-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 LRRK2Q5S007 2527 aa-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 ANKRD11Q6UB99 2663 aaPredicted RBP-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 TIAM2Q8IVF5 1701 aa-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 CLIP1P30622 1438 aa-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
PAPD4-213ENST00000510721 A0A0C4DFX4 3053 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 ALKQ9UM73 1620 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 GCN1Q92616 2671 aaKnown RBP-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 TMEM262E9PQX1 116 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 ARMS2P0C7Q2 107 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 KRTDAPP60985 99 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 CGREF1Q99674 301 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 GNG8Q9UK08 70 aa-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 PRDM15P57071 1507 aaPredicted RBP-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.56□□□□□ -2.5
PAPD4-213ENST00000510721 SAMD9Q5K651 1589 aa-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 SUPT6HQ7KZ85 1726 aaKnown RBP-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 PSMG4Q5JS54 123 aa-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 MLH3Q9UHC1 1453 aa-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 PLECQ15149 4684 aaKnown RBP-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 ANK3Q12955 4377 aaKnown RBP-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 ITPR1Q14643 2758 aa-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 TEX15Q9BXT5 2789 aa-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 RGPD8O14715 1765 aaPredicted RBP-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 RGPD5Q99666 1765 aa-0.57□□□□□ -2.5
PAPD4-213ENST00000510721 RGPD1P0DJD0 1748 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 KALRNO60229 2985 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 LAMA3Q16787 3333 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 TRBV25-1A0A075B6N4 114 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 C9orf92A6NGG3 77 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 H7BZZ5 65 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 MRPS10P82664 201 aaKnown RBP-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 PMCHL1Q16048 86 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 PSENENQ9NZ42 101 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 CACFD1Q9UGQ2 172 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 SRCAPQ6ZRS2 3230 aa-0.58□□□□□ -2.5
PAPD4-213ENST00000510721 ACACBO00763 2458 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 TMEM218A2RU14 115 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 NDUFA3O95167 84 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 UQCRHP07919 91 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 SARNPP82979 210 aaKnown RBP-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 DEFA5Q01523 94 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 NMSQ5H8A3 153 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 GTF2H5Q6ZYL4 71 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 AP4S1Q9Y587 144 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 CLTCQ00610 1675 aaKnown RBP-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 DNAH11Q96DT5 4516 aa-0.59□□□□□ -2.5
PAPD4-213ENST00000510721 LTN1O94822 1766 aa-0.6□□□□□ -2.5
PAPD4-213ENST00000510721 NRXN1Q9ULB1 1477 aa-0.6□□□□□ -2.5
PAPD4-213ENST00000510721 POLR1AO95602 1720 aaPredicted RBP-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 IGLC2P0DOY2 106 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 IGLC3P0DOY3 106 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 S4R3F8 94 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 MAP3K1Q13233 1512 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 ABCC2Q92887 1545 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 NESP48681 1621 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 USP32Q8NFA0 1604 aa-0.6□□□□□ -2.51
PAPD4-213ENST00000510721 MAGI2Q86UL8 1455 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 RAPGEF2Q9Y4G8 1499 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 NBEAQ8NFP9 2946 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 APOBP04114 4563 aaKnown RBP-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 CEP290O15078 2479 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 GNGT2O14610 69 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 NDUFC1O43677 76 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 COX7BP24311 80 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 TRGV9Q99603 122 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 LRRC7Q96NW7 1537 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 ANKRD36CQ5JPF3 1778 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 ANKRD36BQ8N2N9 1353 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 RELNP78509 3460 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 UBR1Q8IWV7 1749 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 LRRC9Q6ZRR7 1453 aa-0.61□□□□□ -2.51
PAPD4-213ENST00000510721 C20orf202A1L168 122 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 D6R8Y8 96 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 F8WEM9 126 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 LEPROTL1O95214 131 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 MT-ATP8P03928 68 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 MT1HP80294 61 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 DEFB110Q30KQ9 67 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 ETDBQ3ZM63 59 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 MUSTN1Q8IVN3 82 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 PMCHL2Q9BQD1 86 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 UTP20O75691 2785 aaKnown RBP-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 DOT1LQ8TEK3 1739 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 CEP295Q9C0D2 2601 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 DNAH1Q9P2D7 4330 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 PLXNC1O60486 1568 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 DMXL2Q8TDJ6 3036 aa-0.62□□□□□ -2.51
PAPD4-213ENST00000510721 CMYA5Q8N3K9 4069 aa-0.63□□□□□ -2.51
PAPD4-213ENST00000510721 H0YAA0 97 aa-0.63□□□□□ -2.51
PAPD4-213ENST00000510721 MPC2O95563 127 aa-0.63□□□□□ -2.51
PAPD4-213ENST00000510721 RPL38P63173 70 aaKnown RBP-0.63□□□□□ -2.51
PAPD4-213ENST00000510721 COX6B2Q6YFQ2 88 aa-0.63□□□□□ -2.51
PAPD4-213ENST00000510721 DNAH7Q8WXX0 4024 aa-0.63□□□□□ -2.51
PAPD4-213ENST00000510721 DDX60LQ5H9U9 1706 aaKnown RBP-0.64□□□□□ -2.51
PAPD4-213ENST00000510721 TRIOO75962 3097 aa-0.64□□□□□ -2.51
PAPD4-213ENST00000510721 NWD1Q149M9 1564 aa-0.64□□□□□ -2.51
PAPD4-213ENST00000510721 K7EP34 96 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms