RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DEFB116Q30KQ4 102 aa10.01□□□□□ -0.81
USP38-202ENST00000510377 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
USP38-202ENST00000510377 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
USP38-202ENST00000510377 HIVEP1P15822 2718 aa10□□□□□ -0.81
USP38-202ENST00000510377 APCP25054 2843 aa10□□□□□ -0.81
USP38-202ENST00000510377 PRYO14603 147 aa10□□□□□ -0.81
USP38-202ENST00000510377 ELOF1P60002 83 aaKnown RBP9.99□□□□□ -0.81
USP38-202ENST00000510377 Q8NAQ8 132 aa9.99□□□□□ -0.81
USP38-202ENST00000510377 MP68P56378 58 aa9.98□□□□□ -0.81
USP38-202ENST00000510377 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.98□□□□□ -0.81
USP38-202ENST00000510377 KRTAP10-3P60369 221 aa9.97□□□□□ -0.81
USP38-202ENST00000510377 C7orf33Q8WU49 177 aa9.96□□□□□ -0.81
USP38-202ENST00000510377 ESRGQ1W209 222 aa9.96□□□□□ -0.82
USP38-202ENST00000510377 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
USP38-202ENST00000510377 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.82
USP38-202ENST00000510377 VPREB1P12018 145 aa9.95□□□□□ -0.82
USP38-202ENST00000510377 NSD1Q96L73 2696 aaPredicted RBP9.95□□□□□ -0.82
USP38-202ENST00000510377 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
USP38-202ENST00000510377 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
USP38-202ENST00000510377 H7BZZ5 65 aa9.94□□□□□ -0.82
USP38-202ENST00000510377 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
USP38-202ENST00000510377 Q6ZRP5 223 aa9.93□□□□□ -0.82
USP38-202ENST00000510377 NIPBLQ6KC79 2804 aaeCLIP9.93□□□□□ -0.82
USP38-202ENST00000510377 ATP5EP56381 51 aaPredicted RBP9.93□□□□□ -0.82
USP38-202ENST00000510377 H0Y9J4 135 aa9.92□□□□□ -0.82
USP38-202ENST00000510377 UBE2AP49459 152 aa9.92□□□□□ -0.82
USP38-202ENST00000510377 NDUFS5O43920 106 aa9.92□□□□□ -0.82
USP38-202ENST00000510377 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
USP38-202ENST00000510377 ST20-AS1Q8NBB2 130 aa9.92□□□□□ -0.82
USP38-202ENST00000510377 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
USP38-202ENST00000510377 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
USP38-202ENST00000510377 BSNQ9UPA5 3926 aa9.88□□□□□ -0.83
USP38-202ENST00000510377 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
USP38-202ENST00000510377 OXTP01178 125 aa9.88□□□□□ -0.83
USP38-202ENST00000510377 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
USP38-202ENST00000510377 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
USP38-202ENST00000510377 BCE1O60756 84 aa9.87□□□□□ -0.83
USP38-202ENST00000510377 PRLHP81277 87 aa9.87□□□□□ -0.83
USP38-202ENST00000510377 LINC00528Q8N1L1 170 aa9.87□□□□□ -0.83
USP38-202ENST00000510377 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
USP38-202ENST00000510377 PSPHP1O15172 72 aa9.87□□□□□ -0.83
USP38-202ENST00000510377 A0A087WSZ3 146 aa9.87□□□□□ -0.83
USP38-202ENST00000510377 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
USP38-202ENST00000510377 LINC00208Q96KT6 92 aa9.86□□□□□ -0.83
USP38-202ENST00000510377 LINC00336Q6ZUF6 198 aa9.86□□□□□ -0.83
USP38-202ENST00000510377 A0A0G2JQZ4 141 aa9.85□□□□□ -0.83
USP38-202ENST00000510377 A0A1W2PNN7 141 aa9.85□□□□□ -0.83
USP38-202ENST00000510377 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
USP38-202ENST00000510377 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
USP38-202ENST00000510377 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
USP38-202ENST00000510377 REG3GQ6UW15 175 aa9.82□□□□□ -0.84
USP38-202ENST00000510377 NDUFB1O75438 58 aa9.81□□□□□ -0.84
USP38-202ENST00000510377 C1orf195Q5TG92 126 aa9.81□□□□□ -0.84
USP38-202ENST00000510377 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
USP38-202ENST00000510377 Q8N377 158 aa9.8□□□□□ -0.84
USP38-202ENST00000510377 LINC01556Q5JQF7 62 aa9.8□□□□□ -0.84
USP38-202ENST00000510377 Q6ZRX8 168 aa9.8□□□□□ -0.84
USP38-202ENST00000510377 SPTSSBQ8NFR3 76 aa9.8□□□□□ -0.84
USP38-202ENST00000510377 LY6G6CO95867 125 aa9.79□□□□□ -0.84
USP38-202ENST00000510377 Q8NBF4 154 aa9.78□□□□□ -0.84
USP38-202ENST00000510377 HCG22E2RYF7 251 aa9.77□□□□□ -0.85
USP38-202ENST00000510377 Q5XG85 94 aa9.77□□□□□ -0.85
USP38-202ENST00000510377 K7EQZ3 153 aa9.76□□□□□ -0.85
USP38-202ENST00000510377 MDFIQ99750 246 aa9.76□□□□□ -0.85
USP38-202ENST00000510377 Q9BRP9 147 aa9.75□□□□□ -0.85
USP38-202ENST00000510377 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
USP38-202ENST00000510377 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
USP38-202ENST00000510377 B9D2Q9BPU9 175 aa9.74□□□□□ -0.85
USP38-202ENST00000510377 CSMD2Q7Z408 3487 aa9.74□□□□□ -0.85
USP38-202ENST00000510377 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
USP38-202ENST00000510377 KCNQ1DNQ9H478 68 aa9.73□□□□□ -0.85
USP38-202ENST00000510377 CASC10Q5T4H9 136 aa9.73□□□□□ -0.85
USP38-202ENST00000510377 V9GYY9 64 aa9.73□□□□□ -0.85
USP38-202ENST00000510377 A0A1W2PNM2 257 aa9.71□□□□□ -0.85
USP38-202ENST00000510377 ERC2-IT1O76042 136 aa9.71□□□□□ -0.85
USP38-202ENST00000510377 CASC2Q6XLA1 102 aa9.71□□□□□ -0.85
USP38-202ENST00000510377 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
USP38-202ENST00000510377 TENM4Q6N022 2769 aa9.71□□□□□ -0.86
USP38-202ENST00000510377 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
USP38-202ENST00000510377 LINC00588Q9Y4M8 146 aa9.7□□□□□ -0.86
USP38-202ENST00000510377 H0Y9P7 68 aa9.69□□□□□ -0.86
USP38-202ENST00000510377 H3BNG1 76 aa9.69□□□□□ -0.86
USP38-202ENST00000510377 KMT2BQ9UMN6 2715 aaPredicted RBP9.68□□□□□ -0.86
USP38-202ENST00000510377 IGLV1-50A0A075B6I6 118 aa9.67□□□□□ -0.86
USP38-202ENST00000510377 F8WDY8 70 aa9.67□□□□□ -0.86
USP38-202ENST00000510377 KRTAP10-11P60412 298 aa9.67□□□□□ -0.86
USP38-202ENST00000510377 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
USP38-202ENST00000510377 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
USP38-202ENST00000510377 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
USP38-202ENST00000510377 OCR1Q9BZK8 76 aa9.66□□□□□ -0.86
USP38-202ENST00000510377 PRR15LQ9BU68 103 aa9.65□□□□□ -0.86
USP38-202ENST00000510377 A6NED7 52 aa9.64□□□□□ -0.87
USP38-202ENST00000510377 FAM229BQ4G0N7 80 aa9.64□□□□□ -0.87
USP38-202ENST00000510377 C1orf64Q8NEQ6 169 aa9.63□□□□□ -0.87
USP38-202ENST00000510377 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
USP38-202ENST00000510377 ZFHX3Q15911 3703 aa9.62□□□□□ -0.87
USP38-202ENST00000510377 C14orf177Q52M58 125 aa9.62□□□□□ -0.87
USP38-202ENST00000510377 DNAH10OSP0CZ25 163 aa9.62□□□□□ -0.87
USP38-202ENST00000510377 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
USP38-202ENST00000510377 IGFL1Q6UW32 110 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms