RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 FMN2Q9NZ56 1722 aa0.67□□□□□ -2.3
DEPDC1B-204ENST00000509006 SPRR1BP22528 89 aa0.66□□□□□ -2.3
DEPDC1B-204ENST00000509006 APLNQ9ULZ1 77 aa0.66□□□□□ -2.3
DEPDC1B-204ENST00000509006 PRXQ9BXM0 1461 aa0.66□□□□□ -2.3
DEPDC1B-204ENST00000509006 MAST1Q9Y2H9 1570 aa0.66□□□□□ -2.3
DEPDC1B-204ENST00000509006 PREX2Q70Z35 1606 aa0.65□□□□□ -2.31
DEPDC1B-204ENST00000509006 NRAPQ86VF7 1730 aa0.65□□□□□ -2.31
DEPDC1B-204ENST00000509006 SPINK1P00995 79 aa0.65□□□□□ -2.31
DEPDC1B-204ENST00000509006 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
DEPDC1B-204ENST00000509006 DEFB109BQ30KR1 87 aa0.65□□□□□ -2.31
DEPDC1B-204ENST00000509006 CACNA1EQ15878 2313 aa0.65□□□□□ -2.31
DEPDC1B-204ENST00000509006 DOPEY2Q9Y3R5 2298 aa0.64□□□□□ -2.31
DEPDC1B-204ENST00000509006 ABCC6O95255 1503 aa0.64□□□□□ -2.31
DEPDC1B-204ENST00000509006 ABCA6Q8N139 1617 aa0.64□□□□□ -2.31
DEPDC1B-204ENST00000509006 ALS2Q96Q42 1657 aa0.64□□□□□ -2.31
DEPDC1B-204ENST00000509006 NDUFA3O95167 84 aa0.63□□□□□ -2.31
DEPDC1B-204ENST00000509006 FCER1GP30273 86 aa0.63□□□□□ -2.31
DEPDC1B-204ENST00000509006 LINC00158P58513 81 aa0.63□□□□□ -2.31
DEPDC1B-204ENST00000509006 DEPDC5O75140 1603 aa0.63□□□□□ -2.31
DEPDC1B-204ENST00000509006 CPS1P31327 1500 aa0.63□□□□□ -2.31
DEPDC1B-204ENST00000509006 PLCE1Q9P212 2302 aa0.63□□□□□ -2.31
DEPDC1B-204ENST00000509006 PIEZO2Q9H5I5 2752 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 C3P01024 1663 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 H1FX-AS1Q4G0G2 97 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 WFDC13Q8IUB5 93 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 PTPRQQ9UMZ3 2332 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 TNCP24821 2201 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 SYCP2Q9BX26 1530 aa0.62□□□□□ -2.31
DEPDC1B-204ENST00000509006 RNF17Q9BXT8 1623 aaKnown RBP0.61□□□□□ -2.31
DEPDC1B-204ENST00000509006 ZNF462Q96JM2 2506 aa0.61□□□□□ -2.31
DEPDC1B-204ENST00000509006 CROCC2H7BZ55 1655 aa0.61□□□□□ -2.31
DEPDC1B-204ENST00000509006 PTPRZ1P23471 2315 aaPredicted RBP0.61□□□□□ -2.31
DEPDC1B-204ENST00000509006 SPTBN2O15020 2390 aa0.61□□□□□ -2.31
DEPDC1B-204ENST00000509006 CACNA1HO95180 2353 aa0.61□□□□□ -2.31
DEPDC1B-204ENST00000509006 ADCY10Q96PN6 1610 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 TTC28Q96AY4 2481 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 KIAA0586Q9BVV6 1533 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 USF3Q68DE3 2245 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 KIF1AQ12756 1690 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 C2CD3Q4AC94 2353 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 LYNX1G3V0Z9 82 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 LY75O60449 1722 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 TJP1Q07157 1748 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 MEGF8Q7Z7M0 2845 aa0.6□□□□□ -2.31
DEPDC1B-204ENST00000509006 SNRPGP15A8MWD9 76 aa0.59□□□□□ -2.31
DEPDC1B-204ENST00000509006 PLNP26678 52 aa0.59□□□□□ -2.31
DEPDC1B-204ENST00000509006 H0YGX0 51 aa0.58□□□□□ -2.32
DEPDC1B-204ENST00000509006 M0R1W7 72 aa0.58□□□□□ -2.32
DEPDC1B-204ENST00000509006 TMEM167BQ9NRX6 74 aa0.58□□□□□ -2.32
DEPDC1B-204ENST00000509006 CNOT1A5YKK6 2376 aaKnown RBP0.58□□□□□ -2.32
DEPDC1B-204ENST00000509006 UGGT1Q9NYU2 1555 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 ABCA12Q86UK0 2595 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 LOC730098B7Z3J9 87 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 CRIP1P50238 77 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 MINOS1Q5TGZ0 78 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 CMC2Q9NRP2 79 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 U3KQA8 63 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 POLQO75417 2590 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 C4AP0C0L4 1744 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 C4BP0C0L5 1744 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 TENM3Q9P273 2699 aa0.57□□□□□ -2.32
DEPDC1B-204ENST00000509006 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.56□□□□□ -2.32
DEPDC1B-204ENST00000509006 CHD9Q3L8U1 2897 aa0.56□□□□□ -2.32
DEPDC1B-204ENST00000509006 CELSR2Q9HCU4 2923 aa0.56□□□□□ -2.32
DEPDC1B-204ENST00000509006 ZNF292O60281 2723 aa0.56□□□□□ -2.32
DEPDC1B-204ENST00000509006 CLASP1Q7Z460 1538 aa0.56□□□□□ -2.32
DEPDC1B-204ENST00000509006 IAPPP10997 89 aa0.56□□□□□ -2.32
DEPDC1B-204ENST00000509006 FANCD2Q9BXW9 1451 aa0.55□□□□□ -2.32
DEPDC1B-204ENST00000509006 GLI2P10070 1586 aa0.55□□□□□ -2.32
DEPDC1B-204ENST00000509006 IGIPA6NJ69 53 aa0.55□□□□□ -2.32
DEPDC1B-204ENST00000509006 ABCC8Q09428 1581 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 ITSN2Q9NZM3 1697 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 H0YAA0 97 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 H0YGG7 62 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 C6orf48Q9UBA6 75 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 PKDREJQ9NTG1 2253 aa0.54□□□□□ -2.32
DEPDC1B-204ENST00000509006 BDP1A6H8Y1 2624 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 ABCA5Q8WWZ7 1642 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 F8P00451 2351 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 SPTBN1Q01082 2364 aaKnown RBP0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 H3BUA1 57 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 PRH1P02810 166 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 LELP1Q5T871 98 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 SMR3AQ99954 134 aa0.53□□□□□ -2.32
DEPDC1B-204ENST00000509006 APCP25054 2843 aa0.52□□□□□ -2.33
DEPDC1B-204ENST00000509006 MROH2AA6NES4 1674 aa0.52□□□□□ -2.33
DEPDC1B-204ENST00000509006 TPRP12270 2363 aaKnown RBP0.52□□□□□ -2.33
DEPDC1B-204ENST00000509006 DEFB130BP0DP73 79 aa0.51□□□□□ -2.33
DEPDC1B-204ENST00000509006 DEFB130AP0DP74 79 aa0.51□□□□□ -2.33
DEPDC1B-204ENST00000509006 EFCAB6Q5THR3 1501 aa0.51□□□□□ -2.33
DEPDC1B-204ENST00000509006 BPTFQ12830 3046 aa0.51□□□□□ -2.33
DEPDC1B-204ENST00000509006 ANKRD36CQ5JPF3 1778 aa0.5□□□□□ -2.33
DEPDC1B-204ENST00000509006 M0R2T5 61 aa0.5□□□□□ -2.33
DEPDC1B-204ENST00000509006 DEFB135Q30KP9 77 aa0.5□□□□□ -2.33
DEPDC1B-204ENST00000509006 ABRACLQ9P1F3 81 aa0.5□□□□□ -2.33
DEPDC1B-204ENST00000509006 AKAP6Q13023 2319 aa0.5□□□□□ -2.33
DEPDC1B-204ENST00000509006 WNK2Q9Y3S1 2297 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms