RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 CBY1Q9Y3M2 126 aa4.75□□□□□ -1.65
COL4A3BP-206ENST00000508809 A0A096LNJ9 63 aa4.74□□□□□ -1.65
COL4A3BP-206ENST00000508809 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
COL4A3BP-206ENST00000508809 FA2HQ7L5A8 372 aa4.74□□□□□ -1.65
COL4A3BP-206ENST00000508809 FAM19A2Q8N3H0 131 aa4.74□□□□□ -1.65
COL4A3BP-206ENST00000508809 SLC25A20O43772 301 aa4.73□□□□□ -1.65
COL4A3BP-206ENST00000508809 LINC00158P58513 81 aa4.73□□□□□ -1.65
COL4A3BP-206ENST00000508809 SLC7A5P1Q8MH63 180 aa4.73□□□□□ -1.65
COL4A3BP-206ENST00000508809 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
COL4A3BP-206ENST00000508809 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
COL4A3BP-206ENST00000508809 NDUFA6P56556 154 aa4.72□□□□□ -1.65
COL4A3BP-206ENST00000508809 MT1HP80294 61 aa4.72□□□□□ -1.65
COL4A3BP-206ENST00000508809 VAMP3Q15836 100 aa4.72□□□□□ -1.65
COL4A3BP-206ENST00000508809 UQCC3Q6UW78 93 aa4.72□□□□□ -1.65
COL4A3BP-206ENST00000508809 SMCO4Q9NRQ5 59 aa4.72□□□□□ -1.65
COL4A3BP-206ENST00000508809 COX19Q49B96 90 aa4.71□□□□□ -1.66
COL4A3BP-206ENST00000508809 TMEM170BQ5T4T1 132 aa4.71□□□□□ -1.66
COL4A3BP-206ENST00000508809 TRBV10-3A0A0K0K1G6 114 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 ETDCA0A1B0GVM5 59 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 ERC2-IT1O76042 136 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 LINC00614P0C842 121 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 FABP9Q0Z7S8 132 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 MOBPQ13875 183 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 BAGE3Q86Y29 109 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 BOD1L2Q8IYS8 172 aa4.7□□□□□ -1.66
COL4A3BP-206ENST00000508809 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
COL4A3BP-206ENST00000508809 HBDP02042 147 aa4.69□□□□□ -1.66
COL4A3BP-206ENST00000508809 SMIM13P0DJ93 91 aa4.69□□□□□ -1.66
COL4A3BP-206ENST00000508809 LOC107984156A0A0G2JMH3 177 aa4.68□□□□□ -1.66
COL4A3BP-206ENST00000508809 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
COL4A3BP-206ENST00000508809 S100PP25815 95 aa4.68□□□□□ -1.66
COL4A3BP-206ENST00000508809 ARL17AQ8IVW1 177 aa4.68□□□□□ -1.66
COL4A3BP-206ENST00000508809 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
COL4A3BP-206ENST00000508809 Q9BRP9 147 aa4.68□□□□□ -1.66
COL4A3BP-206ENST00000508809 TMEM218A2RU14 115 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 LINC00587B1AMM8 73 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 NCR3O14931 201 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 PMCHL1Q16048 86 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 C18orf32Q8TCD1 76 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 LITAFQ99732 161 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 SEC11CQ9BY50 192 aa4.67□□□□□ -1.66
COL4A3BP-206ENST00000508809 TRAV12-1A0A0B4J245 112 aa4.66□□□□□ -1.66
COL4A3BP-206ENST00000508809 TRBV10-2A0A0K0K1G8 114 aa4.66□□□□□ -1.66
COL4A3BP-206ENST00000508809 S100A12P80511 92 aa4.66□□□□□ -1.66
COL4A3BP-206ENST00000508809 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
COL4A3BP-206ENST00000508809 CLLU1Q5K131 121 aa4.66□□□□□ -1.66
COL4A3BP-206ENST00000508809 Q6ZRX8 168 aa4.66□□□□□ -1.66
COL4A3BP-206ENST00000508809 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
COL4A3BP-206ENST00000508809 MEIG1Q5JSS6 88 aa4.65□□□□□ -1.67
COL4A3BP-206ENST00000508809 DDTP30046 118 aa4.64□□□□□ -1.67
COL4A3BP-206ENST00000508809 Q6ZVQ6 151 aa4.64□□□□□ -1.67
COL4A3BP-206ENST00000508809 MYMXA0A1B0GTQ4 84 aa4.63□□□□□ -1.67
COL4A3BP-206ENST00000508809 IGLV6-57P01721 117 aa4.63□□□□□ -1.67
COL4A3BP-206ENST00000508809 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
COL4A3BP-206ENST00000508809 MAP1LC3CQ9BXW4 147 aa4.63□□□□□ -1.67
COL4A3BP-206ENST00000508809 TRAPPC1Q9Y5R8 145 aa4.63□□□□□ -1.67
COL4A3BP-206ENST00000508809 USH2AO75445 5202 aa4.62□□□□□ -1.67
COL4A3BP-206ENST00000508809 C10orf91Q5T1B1 145 aa4.62□□□□□ -1.67
COL4A3BP-206ENST00000508809 C9orf153Q5TBE3 101 aa4.62□□□□□ -1.67
COL4A3BP-206ENST00000508809 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
COL4A3BP-206ENST00000508809 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
COL4A3BP-206ENST00000508809 NDUFC2O95298 119 aa4.61□□□□□ -1.67
COL4A3BP-206ENST00000508809 JOSD1Q15040 202 aaPredicted RBP4.61□□□□□ -1.67
COL4A3BP-206ENST00000508809 RHEBQ15382 184 aa4.61□□□□□ -1.67
COL4A3BP-206ENST00000508809 ST20-AS1Q8NBB2 130 aa4.61□□□□□ -1.67
COL4A3BP-206ENST00000508809 SPANXB1Q9NS25 103 aaPredicted RBP4.61□□□□□ -1.67
COL4A3BP-206ENST00000508809 C9orf92A6NGG3 77 aa4.6□□□□□ -1.67
COL4A3BP-206ENST00000508809 HSBP1O75506 76 aa4.6□□□□□ -1.67
COL4A3BP-206ENST00000508809 SPRR1BP22528 89 aa4.6□□□□□ -1.67
COL4A3BP-206ENST00000508809 LIMD2Q9BT23 127 aa4.6□□□□□ -1.67
COL4A3BP-206ENST00000508809 ZNF73O43830 326 aaPredicted RBP4.59□□□□□ -1.67
COL4A3BP-206ENST00000508809 TSPEAR-AS2P59090 65 aa4.59□□□□□ -1.67
COL4A3BP-206ENST00000508809 CHCHD1Q96BP2 118 aaKnown RBP4.59□□□□□ -1.67
COL4A3BP-206ENST00000508809 RPS10P5Q9NQ39 176 aa4.59□□□□□ -1.67
COL4A3BP-206ENST00000508809 TRAV23DV6A0A075B6W5 121 aa4.58□□□□□ -1.68
COL4A3BP-206ENST00000508809 LEPROTO15243 131 aa4.58□□□□□ -1.68
COL4A3BP-206ENST00000508809 IFITM2Q01629 132 aa4.58□□□□□ -1.68
COL4A3BP-206ENST00000508809 S100A7L2Q5SY68 101 aa4.58□□□□□ -1.68
COL4A3BP-206ENST00000508809 M0R2T5 61 aa4.57□□□□□ -1.68
COL4A3BP-206ENST00000508809 CD164Q04900 197 aa4.57□□□□□ -1.68
COL4A3BP-206ENST00000508809 Q5XG85 94 aa4.57□□□□□ -1.68
COL4A3BP-206ENST00000508809 J3QQQ9 107 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 NMUP48645 174 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 C5orf47Q569G3 176 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 SLC25A34Q6PIV7 304 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 HRCT1Q6UXD1 115 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 SOSTDC1Q6X4U4 206 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 MIEN1Q9BRT3 115 aa4.56□□□□□ -1.68
COL4A3BP-206ENST00000508809 HINT1P49773 126 aaPredicted RBP4.55□□□□□ -1.68
COL4A3BP-206ENST00000508809 RPL37P61927 97 aaKnown RBP4.55□□□□□ -1.68
COL4A3BP-206ENST00000508809 LAMTOR3Q9UHA4 124 aa4.55□□□□□ -1.68
COL4A3BP-206ENST00000508809 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
COL4A3BP-206ENST00000508809 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
COL4A3BP-206ENST00000508809 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
COL4A3BP-206ENST00000508809 COMMD7Q86VX2 200 aa4.54□□□□□ -1.68
COL4A3BP-206ENST00000508809 DHRS4-AS1Q9P1J3 65 aa4.54□□□□□ -1.68
COL4A3BP-206ENST00000508809 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
COL4A3BP-206ENST00000508809 C1orf195Q5TG92 126 aa4.53□□□□□ -1.68
COL4A3BP-206ENST00000508809 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
COL4A3BP-206ENST00000508809 YPEL4Q96NS1 127 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms